Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0809 ATGTTTGGTGAGGGTACCAATAACAGCAGTGTTGGGTCCAATGATTCCCATACCCGCATGTTGGATCACCAAGGATTGAAGTGGCACGCCAACGATAACTACTCGGTTGCCCAAAGCGCCAATCTACGGGGAAGAGTCACTCATGCATTGAGTAATGATGCTTTAGCTCAAGCTCTGATGGACTTTAGTTCTCCGACGGTAGGGCTTGAAAATTTTGAAGAGTGGACGATTGATTTGAGGAAGCTGAATATGGGCGAGGCTTTTGCGCAAGGATCTTTTGGGAAACTCTACCGAGGTACTTACAACGGGGAGGATGTCGCTATCAAAATCTTGGAGAGGACTGAGAATGATAGGGCACAGGTTCAGTTGATGGAACAACAATTTCAGCAGGAGGTTATGATGCTTGCTACATTGAAGCATCCTAATATAGTTCGTTTCATAGGTGCATGCCGTAAACCTATGGTCTGGTGCATCGTTACTGAGTATGCTAAGGGTGGATCAGTTCGACAGTTCTTAAACCAACGTCAAAACCGAGCAGTTCCCCTTAAACAAGCTGTCAAACAAGCTTTGGATGTTGCAAGAGGCATGGCTTATGTTCATGGTCTAGGGTTGATTCACAGGGACTTGAAATCTGACAACCTATTGATTTTTGGTGACAAGTCAATCAAAATTGCTGACTTTGGAGTGGCTCGGATTGAGGTGCACACTGAAGGAATGACTCCCGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAACATAGGCCTTACACACATAAAGTGGATGTATATAGTTTTGGGATTGTTCTCTGGGAGCTTATCACTGGTATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTCAACAGAAATGTCCGCCCAATCTTGCCCGATGATTGTTTGCCTGTTCTCCGTGAAATCATGACAAGGTGCTGGGATGCCAATCCTGATGTTAGGCCACCATTTGCTGAAATTGTAGCAATGCTTGAAAGTGCCGAGATTGAGGTCATGACAACAGTCCGGAAGGCCAGGTTCAGGTGCTGCATATCCCAACCAATGACGGCGGAGTGA 1092 0.4625 MFGEGTNNSSVGSNDSHTRMLDHQGLKWHANDNYSVAQSANLRGRVTHALSNDALAQALMDFSSPTVGLENFEEWTIDLRKLNMGEAFAQGSFGKLYRGTYNGEDVAIKILERTENDRAQVQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLNQRQNRAVPLKQAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVHTEGMTPETGTYRWMAPEMIQHRPYTHKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPILPDDCLPVLREIMTRCWDANPDVRPPFAEIVAMLESAEIEVMTTVRKARFRCCISQPMTAE* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0809 363 Coils Coil 111 131 - -
Mtr3g0809 363 ProSiteProfiles Protein kinase domain profile. 82 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0809 363 Pfam Protein tyrosine and serine/threonine kinase 83 336 IPR001245 GO:0004672|GO:0006468
Mtr3g0809 363 Gene3D Phosphorylase Kinase; domain 1 70 164 - -
Mtr3g0809 363 SUPERFAMILY Protein kinase-like (PK-like) 62 336 IPR011009 -
Mtr3g0809 363 CDD STKc_MAP3K-like 89 336 - -
Mtr3g0809 363 Gene3D Transferase(Phosphotransferase) domain 1 165 358 - -
Mtr3g0809 363 PANTHER SERINE-THREONINE PROTEIN KINASE 7 349 - -
Mtr3g0809 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mtr3g0809 363 PANTHER BNAA09G41440D PROTEIN 7 349 - -
Mtr3g0809 363 PRINTS Tyrosine kinase catalytic domain signature 160 173 IPR001245 GO:0004672|GO:0006468
Mtr3g0809 363 PRINTS Tyrosine kinase catalytic domain signature 198 216 IPR001245 GO:0004672|GO:0006468
Mtr3g0809 363 PRINTS Tyrosine kinase catalytic domain signature 244 254 IPR001245 GO:0004672|GO:0006468
Mtr3g0809 363 PRINTS Tyrosine kinase catalytic domain signature 263 285 IPR001245 GO:0004672|GO:0006468
Mtr3g0809 363 PRINTS Tyrosine kinase catalytic domain signature 307 329 IPR001245 GO:0004672|GO:0006468
Mtr3g0809 363 SMART serkin_6 82 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0809 Mtr-Chr3 11601815 11602909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0809 7 363 MAP Kinase Kinase Kinase AT2G24360 78.992 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr3g0809 PK_Tyr_Ser-Thr 2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0809 - - mtr:MTR_3g034100 730.324