Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0801 ATGGCAATCATTGGAAAAACATGGTTCGTGCTCTTTTTCTTATCTTCCATTTTCTCAATAGTCTCATCAAGAAAAGGACCTTCCTCAAGCAACATAGATTGGTGGTGCAATTTAACACCACATCCTAAGCCATGCAAACACTACACAACACAAATGAACAATCATTTCAAAATCAAACATAGAATTGAATTCAGGGAAATGCTTGTTCAATTAGCCTTAAACCAAGCTCTTACCATGCAAAAAGAAGCACATGAAAATTCTCAACAACAAAACTCATCGGTGCATAAAACGGTTCATGGTGATTGTTTGAAGCTATATGAAAATACAATTTTTCATCTCAACCGCACACTTGAAGGCTTAAACAATGCAAGTAAAAATTGTTCACCAAATGATGCACAAACATGGCTCACAACTTCTCTCACAAATATTGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCAATTTCATTATGCAAGCCAATGTCACTGAGATGATAAGGAACATCTTAGCCATCAATATGCATTTCCTGAATCATAAAACAGAAACAGAAATAGAAGAAGGGTCACTTCCAAATTGGTTTTCTGTGCATGAAAGGAAGCTTTTGCAGTCTAAGTCTCCAATGAAGTTCAATCTTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTTTAAATGCTGCTGCTAAGAGAAAATACAAGACAAGGTATGTGATACATGTGAAGAAAGGTGTTTATAAAGAGAACATTGAGGTTGCTGTTCATAATGATAACATTATGTTGGTCGGTGATGGAATGCAAAATACCATCATAACAAGTTCTAGAAGTGTTCAAGGTGGTTTTACCACTTATAGCTCTGCAACAGCCGGTATTGATGGACTTCACTTCATTGCACGTGACATAACCTTCCAAAATACCGCCGGTCCACACAAGGGTCAAGCAGTGGCGCTCCGATCAGCCTCTGATCTCTCCGTCTTCTACCGGTGTACAATATCGGGTTACCAAGACACCCTCATGGCTCATGCACAACGTCAATTTTACAGACAATGCTTCATCTATGGCACCGTAGACTTCATCTTTGGCAACGCTGCAGTGGTATTCCAAAATTGCAACATTTTCGCAAGAAAACCTTTAGATGGCCAAGCTAACATGATCACTGCCCAAGGTCGAGGTGATCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGACAAGTACAAAACCTTCTTAGGAAGACCTTGGCAACAATATTCAAGAGTTATGGTGATGAAAACTTTTATGGACACTTTAGTCAGCCCCCTAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGACACATTGTATTATGGAGAGTATGAGAATTATGGACCTGGTTCATCAACAACAAACAGGGTAAATTGGCCTGGTTATCATGTGATAACAAACCCAAAGGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGTCCAACATGGTTGGCTAAAACTACTGTGCCATTTACATCTGGTCTTTGA 1587 0.3976 MAIIGKTWFVLFFLSSIFSIVSSRKGPSSSNIDWWCNLTPHPKPCKHYTTQMNNHFKIKHRIEFREMLVQLALNQALTMQKEAHENSQQQNSSVHKTVHGDCLKLYENTIFHLNRTLEGLNNASKNCSPNDAQTWLTTSLTNIETCKSGALELNAQDFNFIMQANVTEMIRNILAINMHFLNHKTETEIEEGSLPNWFSVHERKLLQSKSPMKFNLVVAKDGSGQYKTVQAALNAAAKRKYKTRYVIHVKKGVYKENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCTISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENYGPGSSTTNRVNWPGYHVITNPKEASKFTVAGLLAGPTWLAKTTVPFTSGL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0801 528 Pfam Pectinesterase 215 513 IPR000070 GO:0030599|GO:0042545
Mtr3g0801 528 SUPERFAMILY Pectin lyase-like 211 527 IPR011050 -
Mtr3g0801 528 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 177 IPR006501 GO:0004857
Mtr3g0801 528 PANTHER PECTINESTERASE 1 527 - -
Mtr3g0801 528 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Mtr3g0801 528 Pfam Plant invertase/pectin methylesterase inhibitor 31 176 IPR006501 GO:0004857
Mtr3g0801 528 SMART PMEI_2 27 176 IPR006501 GO:0004857
Mtr3g0801 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 180 IPR035513 -
Mtr3g0801 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 177 IPR035513 -
Mtr3g0801 528 CDD PMEI-like_3 34 180 - -
Mtr3g0801 528 PANTHER PECTINESTERASE 1 527 - -
Mtr3g0801 528 Gene3D - 209 528 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0801 Mtr-Chr3 11419990 11423009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0801 35 528 Carbohydrate Esterase AT5G51490 54.871 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0801 K01051 - gmx:100800413 808.52