Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0788 ATGTTGGTATCAGACTGTGGCACCAGTAGAAATAATAATTTAGGTGTTGTTGCAATCTTGGGTATGGGAGGTGTCGGTAAAACAACCCTTGCACAACTTGTTTACAATGATGAAAAGGTTGAACACCATTTTGATCTCAAGGCCTGGGTTTATGTATCAGAGGATTTCGATGTTGTGAGAGTAACCAAGTCTCTCATTGAATCTGTTGTTAGAAATACATCATCTTCTGCTTCAAAGGTCTGGGAAAGCAATAATCTTGATATCCTTCGAGTTCAGTTAAAGAAAATCTCAAGGGAGAAGAGATTTTTGTTTGTGTTGGATGATCTATGGAATGACAATTACAATGATTGGGATGAGCTAGTAAGTCCACTCATTGATGGAAAACCTGGAAGTATGGTGATTATAACAACCCACCAACGAAAAGTTGCTGAGGTGGCACGCACATTTCCTATACATAAACTAAAACTTTTATCAAATGAAGATTGTTGGTCTTTACTCTCAAAGCATGCATTGGGAAGTGATGAGTTTCACAATAGTACAAACACAACCCTTGAAGAAATAGGCAGAAAGATTGCAAGAAAGTATGGAGGATTGCCAATAGCTGCTAAAACAATAGGAGGACTTCTACGTTCAAAGGTAGACATAACAGAGTGGACTTCAATTTTGAACAGCAACGTATGGAACTTATCAAATGATAATATTCTTCCTGCTTTGCATTTGAGTTATCAATATCTTCCCTCTCATTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCAAAGGATTTCCCACTTGATAAGAAGACATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTCGATTGTTCTCAAGAGGGAAAAATGGCAGAGGAAGTAGGTGATGACTGCTTTGCTGAATTGTTGTCCAGATCCTTAATTCAGCAATCAAATCATGTTGGTCGTGGAAAAAAGTTTTTCATGCATGACCTTGTCAACGATTTAGCTACAATCGTATCTGGAAAAAGTTGTTACAGGCTTGAATGTGGTAATGTCTCTAAAAATGTCCTCCATTTGTCATATACCCAAGAAGTGTATGACATTTTCATGAAGTTTAAAAGTTTCAACAATTTTAAATGCTTGTGA 1122 0.3699 MLVSDCGTSRNNNLGVVAILGMGGVGKTTLAQLVYNDEKVEHHFDLKAWVYVSEDFDVVRVTKSLIESVVRNTSSSASKVWESNNLDILRVQLKKISREKRFLFVLDDLWNDNYNDWDELVSPLIDGKPGSMVIITTHQRKVAEVARTFPIHKLKLLSNEDCWSLLSKHALGSDEFHNSTNTTLEEIGRKIARKYGGLPIAAKTIGGLLRSKVDITEWTSILNSNVWNLSNDNILPALHLSYQYLPSHLKRCFAYCSIFPKDFPLDKKTLVLLWMAEGFLDCSQEGKMAEEVGDDCFAELLSRSLIQQSNHVGRGKKFFMHDLVNDLATIVSGKSCYRLECGNVSKNVLHLSYTQEVYDIFMKFKSFNNFKCL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0788 373 PRINTS Disease resistance protein signature 16 31 - -
Mtr3g0788 373 PRINTS Disease resistance protein signature 96 110 - -
Mtr3g0788 373 PRINTS Disease resistance protein signature 195 209 - -
Mtr3g0788 373 PANTHER DISEASE RESISTANCE PROTEIN RP 11 373 IPR044974 GO:0006952
Mtr3g0788 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 256 IPR027417 -
Mtr3g0788 373 Gene3D - 2 149 IPR027417 -
Mtr3g0788 373 Gene3D - 241 330 IPR036388 -
Mtr3g0788 373 Gene3D - 156 240 IPR042197 -
Mtr3g0788 373 PANTHER - 11 373 - -
Mtr3g0788 373 Pfam NB-ARC domain 10 224 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0788 Mtr-Chr3 11128536 11130003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0788 13 212 WRKY Transcription Factor Family AT5G45050 25.962 3.58e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0788 - - mtr:MTR_3g033130 739.184