Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0779 ATGGCTGCAACTATGATAGGAGGAGCTTTTCTCTCTGCAACTGTTCAGACCTTAGTTGAGAAACTTGCTTCAACAGAGTTTCTTGATTACATCAAAAACACCAAACTCAATGACTCACTCTTGAGGCAGTTACAAACAACACTGCTCACTCTTCAAGTTGTGCTGGATGACGCAGAAGAGAAGCAGATCAACAATCCTGCTGTCAAACAATGGCTTGATGGCTTGAAAGATGCTGTCTTTGATGCCGAGGATTTGCTTCACGAAATCAGTTATGATTCCCTGCGATGCACAATGGAGAGTAAACAAGCTGGAAACAGAAGTAATCAGGTGTGGAACTTCCTTTTATCTCCTTTCAATAGCTTCTATAGAGAGATCAATTCCCAGATGAAGATCATGTGTGAAAGCCTGCAACATTTTGAAAAGAGAAAAGATATACTTCGTTTGCAAACTAAAAGCACAAGGGTTTCACGTAGAACACCTTCAAGTTCAGTGGTAAATGAATCTGTCATGGTGGGTAGGAAGGATGACAAAGAGACAATAATGAACATGTTGCTTTCAAAGAGAGAAACAACCGACAATAATATAGGTGTTGTTGCAATTTTAGGCATGGGAGGTTTAGGAAAAACTACCCTTGCCCAACTTGTTTACAATGATAAAGAAGTTCAACAACATTTTGATTTGAAGGCATGGGTTTGTGTCTCTGAGGATTTTGATATTATGAGAGTAACAAAGTCTCTCCTTGAATCTGCCACTTCCATAACTTCGGAAAGCAATAATCTTGATGTCCTTCGAGTTGAGTTAAAGAAAATCTCGAGGGAGAAAAGATATTTGTTTGTGTTGGACGATCTGTGGAATGACAATTATAATGATTGGGGTGAACTAGTAAGCCCCTTCATTGATGGAAAACCTGGAAGCATGGTGATTATAACAACGCGCCAAGAAAAAGTAGCTGAGGTGGCACACACATTTCCTATACATAAATTAGATCTTCTATCAAATGAAGATTGTTGGACTTTACTCTCAAAGCATGCACTGGGAAATGATGAGTTTCACAATAGTACAAACACAACCCTTGAAGAAATAGGCAGGAAGATTGCAAGAAAGTGTGGAGGATTGCCAATTGCTGCTAAAACACTAGGAGGACTTCTCCGTTCAAAGGTAGACATAACAGAGTGGACTTCAATTTTGAACAGCAACATATGGAACTTGCGAAATGATAATATTCTTCCTGCTTTGCATTTGAGTTATCAATATCTTCCCTCTCACTTGAAAAGATGCTTTGCATATTGTTCAATTTTTCCAAAGGATTGCCCACTCGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATTGTTCTCAAGGGGGGAAAAAGTTGGAGGAATTAGGTGATGATTGTTTTGCTGAATTGTTATCGAGATCGTTAATTCAACAATTAAGCAATGATGATCGTGGGGAAAAATTTGTCATGCATGACCTTGTTAATGATTTAGCAACATTCGTATCAGGAAAAAGTTGTTGCAGGCTTGAATGTGGTGACATCCTTGAAAATGTTCGTCACTTCTCATATAACCAAGAATACTATGACATTTTCATGAAGTTTGAGAAATTACACAATTTTAAATGTTTGCGAAGCTTCCTATGTATTTGCTCGATGACGTGGACGGACAATTATTTATCCTTCAAGTTGATTGATGATTTTCTACCGTCACAAAAAAGGTTGCGTGTGTTATCGCTATCAGGGTATGTAAACATCACCAAGCTACCAGATTCAATTGGAAATTTGGTGCAGTTGCGGTATCTAGATATCTCCTTCAGTAAAATCAAAAGCTTGCCTGATACAACATGTAACCTTTACAATTTACAGACCTTGAATTTATCAAGTTGTTGGAGTCTCACTGAATTACCAGTACATATTGGAAATTTAGTAAGTTTACGTCACCTTGATATAAGCAGGACTAACATAAATGAGTTTCCTGTAGAAATTGGGGGACTAGAAAACCTTCAAACTCTCACACTATTTATAGTGGGCAAGAGACATGTAGGATTAAGTATCAAAGAGCTAAGGAAATTCCCAAACCTACAAGGAAAACTTACCATCAAGAACCTAGATAATGTTGTTGATGCCAAAGAGGCACATGATGCCAACTTGAAAAGCAAAGAGAAAATTCAGGAGTTAGAGCTGATATGGGGAAAACAAAGTGAAGAGTCGCAAAAAGTGAAAGTTGTGCTTGATATGTTGCAACCACCAATAAATTTGAAGAGCCTGAATATTTGCCATGGTGGGACAAGTTTTCCTAGTTGGTTGGGAAATTCTTCGTTTTCTAACATGGTATCCCTCCGCATCACTAATTGTGAATATTGTGTGATACTTCCACCCTTAGGGCAGTTACCTTCTCTGAAGGTCCTAAAAATATGTGGTATGAACATGTTGGAGACAATTGGCCTGGAGTTCTATTATGTCCAGATTGAAGATGGTTCTAATTCTTCCTTCCAACCATTTCCATCCCTTGAGCGCATAAATTTCGACAACATGCCAAATTGGAATGAATGGATTCCCTTTGAAGGCATAAAATGTGCTTTTCCTCAACTTAGAGCTATGGAGTTACATAATTGTCCAGAACTAAGGGGACATTTGCCGAGCAACCTTCCTTGCATAGAAGAAATTGTAATACAAGGTTGTTCTCATCTATTGGAAACAGAGCCCACTTTGCATTGGTTGTCGTCAATAAAAAATTTTAAGATTGATGGGCTTGATGGAAGGACCCAATTGTCATTTCTTGGGAGCGATTCTCCATGTATGATGCAACATGCAGTGATTCAAAAGTGCGCTATGCTGTCATCTGTGCCAAAATTGATTCTGAGAAGCACTTGTCTTACACTCTTGGGACTCGGTAATCTTTCTTCTCTCACTGCATTTCCCTCAAGTGGTCTACCCACTTCATTGCAATCACTTCATATTGAAAATTGTGAGAATTTATCCTTCCTACCTCCTGAAACGTGGAGCAATTACACATCACTTGTGACTCTACATTTAGATCATAGCTGTGGTTCACTTACATCCTTTCCACTCGATGGTTTCCCTGCGCTCCGAACACTTACCATACGTGATTGTAGGAGTCTGGATTCCATTTATATTTCAGAAAGGTCTTCACCTCGGTCGTCGAGCCTCGAATCACTTATAATCATATCCCATGATTCAATTGAATTATTTGAAGTCAAGCTTAAGATGGACACGCTTGCCGCTCTTGAACGGTTGACTCTAGATTGGCCAGAGTTGTCGTTTTGTGAAGGAGTTTGTCTACCTCCCAAATTACAATCAATTATGATACAGTCCAAAAGAACAGCACTGCCTGTGACAGAATGGGGTCTCCAATATTTGACAGCACTTTCCAACTTGGGTATTGGAAAGGGTGATGATATAGTTAACACCTTGATGAAGGAGTCATTGCTACCCGTCTCCCTTGTGTCTCTGGAAATCCATCATCTCTCTGAAATGAAGTCCTTTGATGGAAATGGGCTTCGACACCTCTCCTCTCTCCAACATCTCGTATTTTTTGAATGTCGACAGCTTGAGTCATTACCAGAAAACTGCCTCCCTTCCTCGCTGAAATCACTTACATTTTATGGTTGTGAAAAGCTTAAATCATTACCAGAAGACAGCCTCCCTGACTCTCTTAAGGAACTGGACATCTATGATTGCCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAACATTGCTCCAAAATTGCTCACATCCCCGTCATAAAAATAAACGACCAAGTCACAATATGA 3807 0.3935 MAATMIGGAFLSATVQTLVEKLASTEFLDYIKNTKLNDSLLRQLQTTLLTLQVVLDDAEEKQINNPAVKQWLDGLKDAVFDAEDLLHEISYDSLRCTMESKQAGNRSNQVWNFLLSPFNSFYREINSQMKIMCESLQHFEKRKDILRLQTKSTRVSRRTPSSSVVNESVMVGRKDDKETIMNMLLSKRETTDNNIGVVAILGMGGLGKTTLAQLVYNDKEVQQHFDLKAWVCVSEDFDIMRVTKSLLESATSITSESNNLDVLRVELKKISREKRYLFVLDDLWNDNYNDWGELVSPFIDGKPGSMVIITTRQEKVAEVAHTFPIHKLDLLSNEDCWTLLSKHALGNDEFHNSTNTTLEEIGRKIARKCGGLPIAAKTLGGLLRSKVDITEWTSILNSNIWNLRNDNILPALHLSYQYLPSHLKRCFAYCSIFPKDCPLDRKQLVLLWMAEGFLDCSQGGKKLEELGDDCFAELLSRSLIQQLSNDDRGEKFVMHDLVNDLATFVSGKSCCRLECGDILENVRHFSYNQEYYDIFMKFEKLHNFKCLRSFLCICSMTWTDNYLSFKLIDDFLPSQKRLRVLSLSGYVNITKLPDSIGNLVQLRYLDISFSKIKSLPDTTCNLYNLQTLNLSSCWSLTELPVHIGNLVSLRHLDISRTNINEFPVEIGGLENLQTLTLFIVGKRHVGLSIKELRKFPNLQGKLTIKNLDNVVDAKEAHDANLKSKEKIQELELIWGKQSEESQKVKVVLDMLQPPINLKSLNICHGGTSFPSWLGNSSFSNMVSLRITNCEYCVILPPLGQLPSLKVLKICGMNMLETIGLEFYYVQIEDGSNSSFQPFPSLERINFDNMPNWNEWIPFEGIKCAFPQLRAMELHNCPELRGHLPSNLPCIEEIVIQGCSHLLETEPTLHWLSSIKNFKIDGLDGRTQLSFLGSDSPCMMQHAVIQKCAMLSSVPKLILRSTCLTLLGLGNLSSLTAFPSSGLPTSLQSLHIENCENLSFLPPETWSNYTSLVTLHLDHSCGSLTSFPLDGFPALRTLTIRDCRSLDSIYISERSSPRSSSLESLIIISHDSIELFEVKLKMDTLAALERLTLDWPELSFCEGVCLPPKLQSIMIQSKRTALPVTEWGLQYLTALSNLGIGKGDDIVNTLMKESLLPVSLVSLEIHHLSEMKSFDGNGLRHLSSLQHLVFFECRQLESLPENCLPSSLKSLTFYGCEKLKSLPEDSLPDSLKELDIYDCPLLEERYKRKEHCSKIAHIPVIKINDQVTI* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0779 1268 Coils Coil 41 61 - -
Mtr3g0779 1268 PANTHER - 907 1076 - -
Mtr3g0779 1268 PANTHER - 51 908 - -
Mtr3g0779 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Mtr3g0779 1268 SMART LRR_typ_2 599 622 IPR003591 -
Mtr3g0779 1268 SMART LRR_typ_2 646 669 IPR003591 -
Mtr3g0779 1268 Pfam FNIP Repeat 1198 1235 IPR008615 -
Mtr3g0779 1268 SUPERFAMILY L domain-like 944 1243 - -
Mtr3g0779 1268 Gene3D - 415 503 IPR036388 -
Mtr3g0779 1268 Pfam NB-ARC domain 174 398 IPR002182 GO:0043531
Mtr3g0779 1268 Gene3D Ribonuclease Inhibitor 1080 1257 IPR032675 -
Mtr3g0779 1268 Gene3D - 14 132 - -
Mtr3g0779 1268 Pfam Rx N-terminal domain 10 103 IPR041118 -
Mtr3g0779 1268 Coils Coil 253 273 - -
Mtr3g0779 1268 Pfam Leucine rich repeat 601 659 IPR001611 GO:0005515
Mtr3g0779 1268 Gene3D - 150 323 IPR027417 -
Mtr3g0779 1268 Gene3D Ribonuclease Inhibitor 939 1077 IPR032675 -
Mtr3g0779 1268 PRINTS Disease resistance protein signature 197 212 - -
Mtr3g0779 1268 PRINTS Disease resistance protein signature 270 284 - -
Mtr3g0779 1268 PRINTS Disease resistance protein signature 369 383 - -
Mtr3g0779 1268 PRINTS Disease resistance protein signature 620 636 - -
Mtr3g0779 1268 SUPERFAMILY L domain-like 493 921 - -
Mtr3g0779 1268 PANTHER DISEASE RESISTANCE PROTEIN RP 907 1076 IPR044974 GO:0006952
Mtr3g0779 1268 PANTHER DISEASE RESISTANCE PROTEIN RP 51 908 IPR044974 GO:0006952
Mtr3g0779 1268 Gene3D Ribonuclease Inhibitor 537 930 IPR032675 -
Mtr3g0779 1268 Gene3D - 330 414 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0779 Mtr-Chr3 10961450 10966256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0779 585 684 WRKY Transcription Factor Family AT4G12020 42.574 7.80e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0779 - - mtr:MTR_3g032370 1918.28