Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0778 ATGAGGAATGACAACTTTGCTTTATTCGACGAAGACCCTCTCGGGAGATCGATTAATCTACAAAGCCATTGCTATGGAGAATTTTCCAGTGCTGTTGTTCAAGCCAATACTACTATGGAAGATCAAAGCCAAATTGAAGTTGCCTCTAACAATGCACTCTTTCTTGGAATTTACGATGGCCATGGTGGCACCCAAGCTTCCCGGTTCATCTGTGAACATCTCTTCAAAAATCTATTGAGGTTTGCTAATGATAATGAGAATGATATAACTGAAGCTACCCTGAGAAATGCTGTTTCTGCTACTGAAGAGGGTTTTTTGGATTTTGCAAAAATGAATTATATGCATCAGCCAAATCTTGGATATGTTGGTTCATGCTGTCTTGCTGGAATTATATGGAAAGAGACACTACATGTTGCAAATCTTGGAGATTCGCGGGTTGTAATTGGTACTATGGTTAATAAAAAGATCCGTGCTGAGCAGTTAACAAGAGATCACAATTGTAATGATGAAGCTATTAGAGAAGAACTCAGGGCAATGCATCCTGATGATCCTAACGTTGTGATAAATGATAATGGATCGTGGCGTGTTAAAGGCTTCATTACGGTTAGTAGAGCTATTGGTGATGCATATCTGAAGAGGTCTGAATTTACTTTGCGCGAATCATTCCCCAAATTGGAAATAGTTCCGGAACCCTTTACAAGAGGTGTGCTATCAGCAGAACCAGAGATGCATACTAGAGTTTTAACAGATAATGATCAGTTTATTATATTTGCTTCTGATGGACTTTGGGATTTCTTGTCAAATAAAAAAGCTGCTGAAATTGTTCGAAAGAATCCTAGAAATGGAATTGCGAAAAGGCTTCTGAGTACCGCTCTAGCGGTAGCTGCTAAAAGAAGGAAGGTTACCTATAGGAAGATTCAGGCCGCTGCTACGGGACGCAACAATGTGAGCCGGAGGTCTTTTCATGATGATATAAGTGTGATTGTGGTGTTCTTGGACAAAACGTCGTTTCCGAGGCAGCCTGTACTTAATTTGTCCTACACAGGCTCATCTGACAGGCCTGTACAATCAGATTTTGCACAATTTGGATTAACCACTTCAAGGCTGGATTCAATGAGGCATCGGAGTCTGAAGGATATTATCCAGTTTGAATCAGGTTCATCACATGCATCTAGCTCTCAAGGCCCTCGGACTCCTCTGGCTCTGAACCCTCAAACCCTTGAGGGCGAGAGTTCTCGGGCTCAGAGCAATCGGTAG 1257 0.4177 MRNDNFALFDEDPLGRSINLQSHCYGEFSSAVVQANTTMEDQSQIEVASNNALFLGIYDGHGGTQASRFICEHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMVNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVRKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSFPRQPVLNLSYTGSSDRPVQSDFAQFGLTTSRLDSMRHRSLKDIIQFESGSSHASSSQGPRTPLALNPQTLEGESSRAQSNR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0778 418 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 11 340 - -
Mtr3g0778 418 SUPERFAMILY PP2C-like 29 333 IPR036457 -
Mtr3g0778 418 MobiDBLite consensus disorder prediction 383 418 - -
Mtr3g0778 418 CDD PP2Cc 25 332 IPR001932 -
Mtr3g0778 418 ProSiteProfiles PPM-type phosphatase domain profile. 27 332 IPR001932 -
Mtr3g0778 418 Gene3D - 14 338 IPR036457 -
Mtr3g0778 418 ProSitePatterns PPM-type phosphatase domain signature. 54 62 IPR000222 GO:0043169
Mtr3g0778 418 SMART PP2C_4 12 330 IPR001932 -
Mtr3g0778 418 PANTHER ALPHABET, ISOFORM E-RELATED 11 340 - -
Mtr3g0778 418 Pfam Protein phosphatase 2C 46 300 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0778 Mtr-Chr3 10937099 10938744 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0778 20 348 PP2C-type Phosphatase Gene Family AT5G06750 49.853 6.22e-115 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0778 K01102 - gmx:100806476 353.984