Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0741 ATGGAGGAAGACATGGCACCTTGGTTGAAACCTCAAATCGAAGAAGAGTGGTACATGAACAGTATACCGCCTCATACTGAAGAACTTATCCCAAATCTTCAAAACCACACTCAACAACAAAACAATGTCGGTCCTTCAGATCCAAACACTTCTGTTTTTAAGCACCATTTAGGTTCCTCGTTTTCTTTGCCATCACCTAAATCCAATTTCTCAAATCTACTAAATATTAATGACAACATCAATATAAATGGCTCCACCACCAACAACAAAAATGACAACAACAACCCATTCGGTAGTGTCTTCAATTTAGAATCCCAAGGTTTTTCTCAAACTCCATTGTCAATTCCGCGATTAACCTTGACATGGTTGAACGGATTTGAGAAGAAGATGAGAAAAGATGAAAATGGAGAGGTTGAGAAAGGATTGAATTACAACTCTAATGAGAGCGTTGATGCTGGGAAGATGAGGAACCACGAGAAAAATGCGGACAATAATTATAACTCAAACACCATCATAGATAATTTTGATGATGAAAATTGTGTTAGTGAGGGTGACCGAAAAGGGAAGAAGAAGGAAAATCCATCAAAGAGTCTCATCGCTGAGAGGAAGCGAAGGAAGAAACTCAAGAATAATATGCACAAGCTTCGTTCTGTTGTGCCAAAGATTAGCAAGATGGATAAAGTTTCAATACTTGGGGATGCTGTTGACTACTTGAAGGAGTTAAAACAACAAATTAATGATCTTCAAAGTGAGATAAAATCAAGCTCTCATAAATCATTTATGCCATTGCCTATGACATCTACCATGTCAACCCTTCCGGTTCAACTTAAAGAACAATTATTTCAAAACAATGTATCAAGCCTTAAAAACCAACCAGCAAAGGTAGAGGTTAGGGTAAAGGAAGGGGGGATTGTCAACATACATATAACTTGTGCTTCCAAACCAGGTGTTTTGGTCTCGACTATGATGGCATTAGATAGCCTTGGATTGGATGTTCATCAGGCTAACATAAGTTGTTTTAATGATTTTTCTCTAGATGTGTTCAAAGTTGAGCAACACAATAAAGACCAGGAGTTGGCCCCCGGGAAAATAAAAGCGGTATTGTTGAAGGCATTAGATTCCCATTAA 1128 0.3803 MEEDMAPWLKPQIEEEWYMNSIPPHTEELIPNLQNHTQQQNNVGPSDPNTSVFKHHLGSSFSLPSPKSNFSNLLNINDNININGSTTNNKNDNNNPFGSVFNLESQGFSQTPLSIPRLTLTWLNGFEKKMRKDENGEVEKGLNYNSNESVDAGKMRNHEKNADNNYNSNTIIDNFDDENCVSEGDRKGKKKENPSKSLIAERKRRKKLKNNMHKLRSVVPKISKMDKVSILGDAVDYLKELKQQINDLQSEIKSSSHKSFMPLPMTSTMSTLPVQLKEQLFQNNVSSLKNQPAKVEVRVKEGGIVNIHITCASKPGVLVSTMMALDSLGLDVHQANISCFNDFSLDVFKVEQHNKDQELAPGKIKAVLLKALDSH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0741 375 MobiDBLite consensus disorder prediction 179 199 - -
Mtr3g0741 375 MobiDBLite consensus disorder prediction 133 204 - -
Mtr3g0741 375 Gene3D - 183 258 IPR036638 GO:0046983
Mtr3g0741 375 PANTHER TRANSCRIPTION FACTOR SCREAM2 5 373 - -
Mtr3g0741 375 Pfam Helix-loop-helix DNA-binding domain 199 241 IPR011598 GO:0046983
Mtr3g0741 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 268 IPR036638 GO:0046983
Mtr3g0741 375 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 5 373 - -
Mtr3g0741 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Mtr3g0741 375 SMART finulus 198 247 IPR011598 GO:0046983
Mtr3g0741 375 Coils Coil 231 258 - -
Mtr3g0741 375 MobiDBLite consensus disorder prediction 162 176 - -
Mtr3g0741 375 ProSiteProfiles ACT domain profile. 306 375 IPR002912 -
Mtr3g0741 375 CDD ACT_UUR-ACR-like 307 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0741 Mtr-Chr3 10277107 10280187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0741 133 351 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 49.554 4.81e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr3g0741 HLH 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0741 - - mtr:MTR_3g104100 494.197