Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0735 ATGGAAGCTGCAGTAATTGATGCCGGTTCCAGTCTCCTCAAAGCCGGATTTGCTATTCCCGATCAAACTCCTGCCATGATAATTCCTAGTCAGATGAAACGAATGGTTGATGAAACAAATGATAATGGTAATGGTCAGTTGGTGGTGGATGATGTCGCGGTTGAGCCAGTGGTAAGAGGTTATGTTAGAGATTGGGATGCTATGGAGGATTTGTTGAATTATGTTTTGTACAGTGGACTTGGATGGGAAATTGGTAATGAGGGACAAATATTGTTTACAGATCCACTTTGTACCCCAAAGGCTAACAAAGAACAGTTAGTGCAACTTATGTTTGAAACGTTCAACATATCAGGGTTTTATGCCTCGGAACAGGCAGTTTTATCACTCTATGCCGTGGGTAGGATCTCTGGATGCACAGTTGACATTGGTCATGGAAAAATAGATATTGCTCCAGTAATTGAGGGTGCTGTTAACCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTACTGATCTAACTAATTTCCTGGCTCAAGAACTTGGCAAATCCAATCCACTAGTGAATATCAGCATATCTGATGTCGAGAAAATAAAACAGCAATACTCATGTTGTGCTGAAGATGACTTAGCTTATCAAAAGACAGAAGACTCTTGTCCTGTGGAAACACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAAGATATACAGTTGGTGAAGCTTTATTCCAGCCAAGTCTATTGGGGTTAGAGACTCATGGGATTGTAGAGCAGCTTGTCCGTACTATTTCAACCGTGACATCTGATAATCATCGGCAACTTCTGGAAAATACTGTAGTTTGTGGCGGCACTTCTTCCATGACTGGTTTTGAAGACAGATTTCAGAAGGAATCTTTGCTATGTTCATCTGCCGTTCGACCTACCTTGGTTAAGCCTCCGGAATATATGCCTGAAAATTTGACCATGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAATCAGCACGTAACTAAGGCAGACTATGACGAAAACGGGCCTTCCATTGTTCACCGGAAATGCTTCTGA 1092 0.4203 MEAAVIDAGSSLLKAGFAIPDQTPAMIIPSQMKRMVDETNDNGNGQLVVDDVAVEPVVRGYVRDWDAMEDLLNYVLYSGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGTDLTNFLAQELGKSNPLVNISISDVEKIKQQYSCCAEDDLAYQKTEDSCPVETHTLPDGQVITIGRERYTVGEALFQPSLLGLETHGIVEQLVRTISTVTSDNHRQLLENTVVCGGTSSMTGFEDRFQKESLLCSSAVRPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHVTKADYDENGPSIVHRKCF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0735 363 Pfam Actin 2 363 IPR004000 -
Mtr3g0735 363 SUPERFAMILY Actin-like ATPase domain 133 363 IPR043129 -
Mtr3g0735 363 Gene3D Actin; Chain A, domain 4 167 254 - -
Mtr3g0735 363 SMART actin_3 1 363 IPR004000 -
Mtr3g0735 363 CDD NBD_sugar-kinase_HSP70_actin 4 168 - -
Mtr3g0735 363 PANTHER ACTIN 1 362 IPR004000 -
Mtr3g0735 363 Gene3D - 125 326 - -
Mtr3g0735 363 SUPERFAMILY Actin-like ATPase domain 2 140 IPR043129 -
Mtr3g0735 363 PANTHER BNACNNG31150D PROTEIN 1 362 - -
Mtr3g0735 363 PRINTS Actin signature 23 32 IPR004000 -
Mtr3g0735 363 PRINTS Actin signature 102 115 IPR004000 -
Mtr3g0735 363 PRINTS Actin signature 127 146 IPR004000 -
Mtr3g0735 363 PRINTS Actin signature 219 235 IPR004000 -
Mtr3g0735 363 Gene3D - 5 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0735 Mtr-Chr3 10207945 10215320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0735 1 363 Cytoskeleton Gene Families AT3G12110 37.731 2.82e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0735 K16615 - gmx:100794153 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0735 3 10207945 10215320 Mtr3g0735 3 10207945 10215320 ECH