Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0697 ATGTGCGGTGGACCTGACAAATCAAAATCTATTGCAACGTCATCATCTTCCTCTTCATCTGCGGCTGAAGGTTCAAATACTGTCGAAGACATGAAAAATCTAACTGTTCGTACTGATGATTCTTTTTCCAGCTTACTTGAACATGCTTCTAACAATGATTTTGAAGATTTCAAGGTAGCTCTAGATAGTGATGCTTCACTTATTAATGAAGTTGGCTTCTGGTATGTCCGTCAAAAGGGATCTAACCAAATTGTTCTTGAGCACCGAACCCCTTTAATGGTGGCTGCTTCCTATGGGAGTATTGATATTCTAAAGCTTATACTCTCATATCCCGAGGCTGATGTTAATTTCTCCTGTGGAACTGATAAAAGCACTGCTCTTCACTGTGCTGCCTCAAGTGGTTCAGTTAATGCTGTTGATGCTATAAAATTGCTTTTATCAGCTGGTGCTGATATCAATTCTGTGGATGCTAATGGGAAACGCCCTGTGGATGTTATCGTTGTTCCTATTGTTGTTCCTCATAAGCTCGAAGGTGTTAAAACAATTCTTGAAGAACTTCTCTCAGACAGTGCTTCTGAAGGATCTGTGGATGATTGCTCTCTTCCCCTGTCTCTTATTTCATCGAGTCCTGGTTCATCTGCCCCTTTATCATCTGCTGAAAATGGATCTCCATCCTCTCCTGTGGCTCCCAAGTTTACAGATACAGCTGTTAATTCTACATCAGAAAAGAAAGAGTATCCAGTTGACCCATCTCTTCCTGACATAAAAAACAGCATGTATGCCACAGATGAATTCCGCATGTATTCATTCAAGGTTCGTCCTTGTTCTCGTGCATACTCTCATGATTGGACTGAGTGTCCTTTTGTGCATCCTGGAGAGAATGCTCGAAGGAGAGACCCTAGAAAGTTTCACTACAGCTGTGTGCCATGCCCTGATTTTAGGAAAGGGGCTTGCCGACGTTCGGATATGTGTGAATATGCTCATGGAGTATTCGAGTGCTGGCTACACCCAGCTCAGTATCGGACAAGGCTGTGCAAAGACGGTATGGGTTGTAACCGAAGGGTGTGCTTCTTCGCTCACTCACCTGAAGAGCTGCGTCCGCTGTATGTGTCCACTGGTTCTGCTGTTCCTTCACCCCGATCAGCTGCTTCTACTGCTAATGTCATGGACATGGCTGCTGCTATGAGCCTTTTCCCTGGTTCACCATCATCAATCTCTTTGATGTCTCAATCACCCTTTGCACAGCCTCCTCTATCTCCATCTGCAAATGGCAATAATGCTTGGCCACAGCCCAATGTGCCAGCTCTTCATTTACCAGGAAGCATTAATCAAACTAGTCGTTTGAGATCTTCTCTTAGTGCCCGTGATATGCCACACGACGACTTCAACAATATGTTGCAAGACTTTGATGGGCAGCAGCAGATACTAAATGACTTGAGCTGTTTCTCACAGCCCCGTCCTGGTGCTATTTCAGTTGGTCGATCTGGCCGCCCTAAAACACTAACTCCCTCAAATCTGGATGATCTTTTTTGTGCTGAGATTGCTTCATCTCCTAGGTATTCCGACCCCGCTGCGGCTTCTGTATTTTCCCCAACACACAAATCTGCTGTCTTCAACCAGTTTCAACAGCTTCAAAGCTCCTTATCACCCATCAACACAAATGTCATGTCTCCTACAAACGTAGAGCATCCCCTGTTCCACCAGGCTTCATATGGTCTCTCTTCTCCTGGAAGGATGTCACCAAGAAGTATGGAAGCCCTATCTCCAATGAGTTCTCGGCTGTCAGCTTTTGCTCAGCGTGAGAAACAACAGCAGCAGCAGCAACAGCTGCGTAGCCTCAGCTCAAGAGAACTCGGTGCTAACAATCCTCTCTCAGCTGTTGGGTCCCCTGTTAACTCCTGGTCCAAGTGGGGATCATCCCCTATTGGAAAAGCTGATTGGTCGGTAAATCCAAATGACTTCGGTCAAACACAGAGATCAACTTCTTTTGAGCATGGAAACAATGGAGAAGAGCCTGATGTAGGTTGGGTCCATTCCCTTGTCAAGGATCCCACACCTGAGAAGAAAGAGAAGCTTGCAGGTTCCGGCCCAATTCCATCCGTTGAAAAGAATCCCAATCCTCAAGCGGACGGCATTGATCACTCTGTTTTGGGAGCTTGGCTCGAGCAACTGCAGCTGGATCAACTTGTAGTCTAG 2196 0.4581 MCGGPDKSKSIATSSSSSSSAAEGSNTVEDMKNLTVRTDDSFSSLLEHASNNDFEDFKVALDSDASLINEVGFWYVRQKGSNQIVLEHRTPLMVAASYGSIDILKLILSYPEADVNFSCGTDKSTALHCAASSGSVNAVDAIKLLLSAGADINSVDANGKRPVDVIVVPIVVPHKLEGVKTILEELLSDSASEGSVDDCSLPLSLISSSPGSSAPLSSAENGSPSSPVAPKFTDTAVNSTSEKKEYPVDPSLPDIKNSMYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRSDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHSPEELRPLYVSTGSAVPSPRSAASTANVMDMAAAMSLFPGSPSSISLMSQSPFAQPPLSPSANGNNAWPQPNVPALHLPGSINQTSRLRSSLSARDMPHDDFNNMLQDFDGQQQILNDLSCFSQPRPGAISVGRSGRPKTLTPSNLDDLFCAEIASSPRYSDPAAASVFSPTHKSAVFNQFQQLQSSLSPINTNVMSPTNVEHPLFHQASYGLSSPGRMSPRSMEALSPMSSRLSAFAQREKQQQQQQQLRSLSSRELGANNPLSAVGSPVNSWSKWGSSPIGKADWSVNPNDFGQTQRSTSFEHGNNGEEPDVGWVHSLVKDPTPEKKEKLAGSGPIPSVEKNPNPQADGIDHSVLGAWLEQLQLDQLVV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0697 731 MobiDBLite consensus disorder prediction 1 30 - -
Mtr3g0697 731 ProSiteProfiles Zinc finger C3H1-type profile. 309 331 IPR000571 GO:0046872
Mtr3g0697 731 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 25 729 - -
Mtr3g0697 731 PRINTS Ankyrin repeat signature 88 103 IPR002110 GO:0005515
Mtr3g0697 731 PRINTS Ankyrin repeat signature 141 155 IPR002110 GO:0005515
Mtr3g0697 731 MobiDBLite consensus disorder prediction 650 667 - -
Mtr3g0697 731 MobiDBLite consensus disorder prediction 212 249 - -
Mtr3g0697 731 MobiDBLite consensus disorder prediction 645 711 - -
Mtr3g0697 731 MobiDBLite consensus disorder prediction 572 605 - -
Mtr3g0697 731 Gene3D - 305 367 - -
Mtr3g0697 731 Pfam Ankyrin repeats (3 copies) 79 156 IPR002110 GO:0005515
Mtr3g0697 731 Gene3D - 6 168 IPR036770 -
Mtr3g0697 731 ProSiteProfiles Ankyrin repeat profile. 122 157 IPR002110 GO:0005515
Mtr3g0697 731 ProSiteProfiles Ankyrin repeat region circular profile. 122 156 - -
Mtr3g0697 731 MobiDBLite consensus disorder prediction 8 30 - -
Mtr3g0697 731 SUPERFAMILY Ankyrin repeat 34 165 IPR036770 -
Mtr3g0697 731 PANTHER UNKEMPT FAMILY MEMBER 25 729 IPR045234 -
Mtr3g0697 731 SMART ANK_2a 122 154 IPR002110 GO:0005515
Mtr3g0697 731 SMART ANK_2a 87 117 IPR002110 GO:0005515
Mtr3g0697 731 SMART c3hfinal6 339 362 IPR000571 GO:0046872
Mtr3g0697 731 SMART c3hfinal6 304 330 IPR000571 GO:0046872
Mtr3g0697 731 MobiDBLite consensus disorder prediction 585 605 - -
Mtr3g0697 731 MobiDBLite consensus disorder prediction 611 630 - -
Mtr3g0697 731 MobiDBLite consensus disorder prediction 212 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0697 Mtr-Chr3 9852942 9857267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0697 1 728 C2H2 Transcription Factor Family AT5G12850 51.194 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr3g0697 Ank_2 1.8e-11 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0697 - - gmx:100792574 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0697 3 9852942 9857267 Mtr3g0697 3 9852942 9857267 ECH