Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0690 ATGGCACTGTACGGCCGAGTCAAATCAGGGATCTCTCTCTGCAACAAATTGGGGCTTCTTTCTTCTCAGAGATCCACTCTTCAACGCTCTCTCATTGCCCCTGCCATTTCTCAGGCCACCAGAAATTATGCTGATGTACCAGGGGCAAGGGAAGCCAAGATTAAGGTCCCTATCGCTATGTTTGGAGGTTCAGGAAACTATGCTTCTGCTTTGTATATTGCAGCAGTGAAAGCTAATGCAGTTGAGAAGGTTGATTCAGAGCTTCTTCAGTTCGTTGAAATGGTAAAGGGTAGCAAGATAACTTCACAGTTCATTAAGGACATATCTGTAAAAAAGGATGTCAGATTAAAAACCATCGAGGATATTGCCAGCAAAGCCAAGTTTTCTGAGACTACAAAGAACTTCCTTGCTCTCCTTGCTGTGAATGGGAGGCTTAAACACGTAGAGCTCATTGCAAAGAGGTTTGCGGAGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCAATTGTGACCACTGTTTTTCCACTTCCCGCTGAGGAAGAGAACGCATTGAAGCAAACTGTTCAGGAAATGTTAGGTTCTGGGGCAAAAGTTAAGCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTATAGTGCTGGAATTCAGCCAAAAAGTCTTTGACATGTCTATAAGGACTAGGGCACAACAGATGGAAAGGATACTCCGAGAACCGATAAATATTTCCGTCTAG 735 0.4381 MALYGRVKSGISLCNKLGLLSSQRSTLQRSLIAPAISQATRNYADVPGAREAKIKVPIAMFGGSGNYASALYIAAVKANAVEKVDSELLQFVEMVKGSKITSQFIKDISVKKDVRLKTIEDIASKAKFSETTKNFLALLAVNGRLKHVELIAKRFAELAMAYKGEVKAIVTTVFPLPAEEENALKQTVQEMLGSGAKVKLEQKIDPSILGGIVLEFSQKVFDMSIRTRAQQMERILREPINISV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0690 244 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Mtr3g0690 244 Gene3D - 64 156 IPR026015 -
Mtr3g0690 244 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 66 236 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 29 238 - -
Mtr3g0690 244 Pfam ATP synthase delta (OSCP) subunit 65 236 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 PANTHER ATP SYNTHASE DELTA CHAIN 29 238 IPR000711 GO:0015986|GO:0046933
Mtr3g0690 244 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0690 103 243 Primary Pumps ATPases AT5G13450 57.447 8.44e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0690 K02137 - gmx:100790990 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0690 3 9761291 9767179 Mtr3g0690 3 9761291 9767179 ECH