Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0686 ATGGCATCTTGTCCAATTTATGTCGCTGATTCGACAAACGAAAATATCATCCAATCTGACTTAGTATACTGCATCAAACTGTCTGACCGTAGTTCTCTATTCTCTGCGTTTAACATTCAATACAACCATCTCCCGATGACATGGTCTGGAACAAATTTTGACATAAGATGCTTGAAATGTGAGAACAAAACAAAGAAGAGGATAACACTCATTACTTTAACCTCAGCAGGTGAGAGCGAGACAACCTTTGTTCGTGTCCTCAATTTCATTTTTATTATAAAGCTGAAATTTTTAAGGATATTGAATGTTAAATTTGCAGGTGTAATAATTGGTTCAACTTTGCTAGTGCTTGTGCTCGGTGCTATTGTTCAAGTCCATCATCATTTCAAGATGAAAGGCGAAGATCATAAAAGAATCGAAAACTTTTTGAAGGATTACAAGGCTTTAAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATCACAAATAAATTTAAGGATAAGTTAGGCGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTATCAAGCCAAATTCTAGTTGGTGTTAAGATGCTAAATAACACAGAGGGAGATGGGAAGGAGTTCATAAATGAAGTGGGAACTATGGGCAAAATCCACCATCTAAATGTTGTCCGTTTGCTTGGCTTTTGCGCCGATGGATTTCATCGTGCTCTAGTCTATGATTTTTTCCCAAATGGTTCTTTGCAGAAATTCATTTCAATGACAGAAGAGGGAGACAAAGATAGTTTCCTTAGATGGGACAAGTTGCAACAAATTGCTCTAGGAATAGCCAATGGAATTGAGTATCTGCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATTAATCCTCATAACGTCTTACTAGATGACAATTTCACCCCAAAAATTACAGACTTCGGTTTGGCTAAGTTGTGCTCAAAAAATCAAAGTACTATATCAATGACTGCAGCCAGAGGAACATTAGGATACATGGCACCCGAAGTTTTTTCTAGAAATTTTGGGAATGTCTCTTATAAGTCTGATATATATAGCTATGGTATGTTGCTATTGGAAATTGTTGGAGGAAGAAAGAATACAAACACAACCACAAATGAAGAAAATTTTCAAGTTCTGTATCCAGATTGGATCCACAGTTTGCTTGAAGGAGGAGAAATACAAATCCCAATAGATGATGAGGGAGATTTTAGAATTGCGAAAAAATTGGCAATCGTGGGACTTTGGTGCATCCAATGGCAACCTATGCATCGTCCGTCTATGAAAACTGTGATGCAAATGCTGCAAGGAGATGGAGACAAGTTACAAGTTCCTTCAAACCCTTATGGACCTACAACTTCATCTAATACAACTACTAATATTGTTGCACCACCACCTATGAATTTGCATCTTGAAGTGATTCAGGAAATAGATTAA 1443 0.3721 MASCPIYVADSTNENIIQSDLVYCIKLSDRSSLFSAFNIQYNHLPMTWSGTNFDIRCLKCENKTKKRITLITLTSAGESETTFVRVLNFIFIIKLKFLRILNVKFAGVIIGSTLLVLVLGAIVQVHHHFKMKGEDHKRIENFLKDYKALKPTRFSYADIKRITNKFKDKLGEGAHGAVYKGKLSSQILVGVKMLNNTEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPNGSLQKFISMTEEGDKDSFLRWDKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLLDDNFTPKITDFGLAKLCSKNQSTISMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTNTTTNEENFQVLYPDWIHSLLEGGEIQIPIDDEGDFRIAKKLAIVGLWCIQWQPMHRPSMKTVMQMLQGDGDKLQVPSNPYGPTTSSNTTTNIVAPPPMNLHLEVIQEID* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0686 480 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 480 - -
Mtr3g0686 480 Gene3D Transferase(Phosphotransferase) domain 1 239 447 - -
Mtr3g0686 480 Pfam Protein kinase domain 167 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0686 480 Gene3D Phosphorylase Kinase; domain 1 138 238 - -
Mtr3g0686 480 ProSiteProfiles Protein kinase domain profile. 164 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0686 480 SUPERFAMILY Protein kinase-like (PK-like) 146 437 IPR011009 -
Mtr3g0686 480 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 480 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0686 Mtr-Chr3 9705608 9707084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0686 107 450 Receptor kinase-like Gene Family AT1G66910 47.143 4.42e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr3g0686 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0686 - - lja:Lj0g3v0145559.1 579.326