Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0685 ATGGTAGTAGTTCTACTACTTCATCATCATCATCATCATCAAGCATGTGATGCAACTAGTAATAGTGATAACCAAAAATTATGTCCACCTTCTTCATGTGGCAAAATGAGAAACATAAAACATCCGTTCCGACTTAAAAATGATCCAACAAACTGTGGTGATCCGAGGTACGAGTTATCCTGTGAAAACAACATCACAACGCTAAGTCTGTTTTGGGGTAAATACTATGTGAAATCAATCAACTACAAAAACTACACAATCAGAGTAGTTGATCCTGGAATAGAAGAAGGTGATTGCACCATTCCTCGCTATTTCTTAACCGCAACCAATTTCACAAGTTATTACAGTCATTACGAGTACAAGGGGGATCCATACGCATTCCATGATTATTCTAGGCCGGAGCATGTAGTATACTTGAACTGTAGCAAGCAACTGAAGAACGATCCTATGTATGTGGATACATCTACGTGTAGACTGAACTCCGAAAATAACAGCTATATTTATGCAATTGCTGGGGACTTTAGAGTTGTTAAATTGAATGTTGGTTGCCGCGTGAAGCTTGTTACTATGTCATCAGCTTTAGCTTTTATCTCCAAGAAAGATTTTCAACCTTTTTCATATGTGGAAATTCATCGATTTCTAAGCTATGGATTTGAACTTTCGTGGATAAGACAACCTTGTGAAGATTCTTGTGACATGAACCAACAAAACTGCTACATGAATTACGACAGCGGAGGTCTTGTATGTACAGTTGACTATTGCACAACTCCATTGGGAATTGATATCAGTTGTGGACTACTCCAAATAGTCGGCGTGAAAAGAAGTTCAGTATTATTAGGTGGAGCCTTTGATTTATCCAAAGTTTCTGATTCTAAAATTGCCATTGAATTAGGAAGAATAAGTGGAAGGTATCTCTTGCCATCATTTATAATGAGATTTATGCTAGGCCTTGTAGTTTTCTTTGTGCTATTGATATATACATGTAGAAGAAGACATACCTCAGCTTACGAAAATATTGAAGTTTTTCTTCGTGGAAGTACCTTGATGCCAATCAGGTATTCATACAAAGATATAAAGAAGATGACTAAAAGTTTTAAGGACAAGTTGGGTGAAGGAGGGTTTGGTTCTGTTTATAAAGGAAAGTTAAGAAGTGGTGCATTTGTTGCCATAAAGATGTTGGGTAAGTCTAAGGGTAATGGACAAGATTTCATTAGTGAGGTTGCAACTATAGGAAGAATACACCATGCAAATGTGGTAAGACTTATTGGATTTTGTGTGGAGAGATCAAAATGTACTCTTGTTTATGAATTCATGCCCAACGGCTCTCTTGATAAATACATTTCCTCTAAAGATGATGTTATTAATCTAACTTATAAGAAAATGTATGAGATATCTATTGGAGTGGCTCGTGGAATTGCTTATTTGCATCAAGGATGTGACATGCAAATCTTGCATTTTGATATCAAGCCCCATAACATACTTCTTGACGAGAACTTTATCCCCAAGGTTTCTGACTTTGGTCTTGCAAAGCTTTATCCTAATGACAATAGTATTGTAAATTTAACTGCAGCAAGAGGAACAATTGGTTATATGGCTCCCGAGTTGTTCTACAAAAATATTGGTGGAGTATCATACAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGCGAAGAAATTTAAATCCACATGCGGATCGTTCAAGCCAACTTTTCTTTCCCTATTGGATTTATAATCAATTGATTGAAGAAAACGAGATAGAGATGGATGAAATTACTGATGAGGAAAGCAGTAATGTGAAGAAAATGTTCATAATTGCATTATGGTGTATACAGTTAAAACCAAGTGATCGTCCTGCAATGAACAAAGTAATAGAGATGCTCGAAGGAAATATTGAGAATATTGAAATGCCTCCAAAACCTTCTTTCTGTCCAAATGAAATTATTGAGGAAGACCTAGAAGTCAAGTCTAATGAAATTGAATCAGACTCAGTTGGTTTTATTGAGGAAGATACAACAGAGCCCTTATTGATGAATTCTGCTTGA 2061 0.3615 MVVVLLLHHHHHHQACDATSNSDNQKLCPPSSCGKMRNIKHPFRLKNDPTNCGDPRYELSCENNITTLSLFWGKYYVKSINYKNYTIRVVDPGIEEGDCTIPRYFLTATNFTSYYSHYEYKGDPYAFHDYSRPEHVVYLNCSKQLKNDPMYVDTSTCRLNSENNSYIYAIAGDFRVVKLNVGCRVKLVTMSSALAFISKKDFQPFSYVEIHRFLSYGFELSWIRQPCEDSCDMNQQNCYMNYDSGGLVCTVDYCTTPLGIDISCGLLQIVGVKRSSVLLGGAFDLSKVSDSKIAIELGRISGRYLLPSFIMRFMLGLVVFFVLLIYTCRRRHTSAYENIEVFLRGSTLMPIRYSYKDIKKMTKSFKDKLGEGGFGSVYKGKLRSGAFVAIKMLGKSKGNGQDFISEVATIGRIHHANVVRLIGFCVERSKCTLVYEFMPNGSLDKYISSKDDVINLTYKKMYEISIGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDNSIVNLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRRNLNPHADRSSQLFFPYWIYNQLIEENEIEMDEITDEESSNVKKMFIIALWCIQLKPSDRPAMNKVIEMLEGNIENIEMPPKPSFCPNEIIEEDLEVKSNEIESDSVGFIEEDTTEPLLMNSA* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0685 686 Gene3D Phosphorylase Kinase; domain 1 343 437 - -
Mtr3g0685 686 SUPERFAMILY Protein kinase-like (PK-like) 348 634 IPR011009 -
Mtr3g0685 686 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 662 - -
Mtr3g0685 686 Pfam Protein kinase domain 366 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0685 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Mtr3g0685 686 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Mtr3g0685 686 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 662 IPR045874 GO:0004672
Mtr3g0685 686 Gene3D Transferase(Phosphotransferase) domain 1 438 643 - -
Mtr3g0685 686 SMART serkin_6 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0685 686 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Mtr3g0685 686 ProSiteProfiles Protein kinase domain profile. 363 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0685 Mtr-Chr3 9694042 9703530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0685 352 659 Receptor kinase-like Gene Family AT5G38280 52.063 5.99e-107 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr3g0685 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0685 - - mtr:MTR_1g027830 966.452