Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0673 ATGGCTCAAAGAACAGAAAATGAAGAAACCGAATTTAAGGTGGTTTCAGAAACCCTTCAACAAACAACAACAATAATAAATCTTTGTATCAAAAACTGCGGTGTTGTCGGAAACCCTTCAACAAACAACATGTGTCAAAATTGTTTCACAGCATCAACGACAATCTTACCACCTTCATCTTCTAGATCTGTTCGGTCTCCGAAGAGATCTCGTCAAGAATCATCATCATCATCAGAAGAAGAAGGGTCAACGGATCATGATTTGGTTGATGAAAAAACGGTTTCTGAGGTGAAGAGGGTTGTTAGTAGATGCTCCGGTTGTCGGAGAAAGGTTGGGTTGGCTGGATTTCGATGTAGATGTGGGGAGTTGTTTTGTGCAGATCATCGATACTCTGATCGACATGATTGTGGGTATGATTATAAGAAGGTTGGTAGAGAAGAGATTGCAAGGGAGAATCCTGTTATCAGAGCTGCGAAAATTGTGAAGGTGTGA 492 0.4085 MAQRTENEETEFKVVSETLQQTTTIINLCIKNCGVVGNPSTNNMCQNCFTASTTILPPSSSRSVRSPKRSRQESSSSSEEEGSTDHDLVDEKTVSEVKRVVSRCSGCRRKVGLAGFRCRCGELFCADHRYSDRHDCGYDYKKVGREEIARENPVIRAAKIVKV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0673 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Mtr3g0673 163 Pfam A20-like zinc finger 28 49 IPR002653 GO:0003677|GO:0008270
Mtr3g0673 163 Gene3D - 89 148 IPR035896 -
Mtr3g0673 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 59 - -
Mtr3g0673 163 MobiDBLite consensus disorder prediction 66 92 - -
Mtr3g0673 163 PANTHER BNAA05G26550D PROTEIN 1 163 - -
Mtr3g0673 163 MobiDBLite consensus disorder prediction 57 92 - -
Mtr3g0673 163 Gene3D - 16 84 - -
Mtr3g0673 163 Pfam AN1-like Zinc finger 104 141 IPR000058 GO:0008270
Mtr3g0673 163 ProSiteProfiles Zinc finger A20-type profile. 23 57 IPR002653 GO:0003677|GO:0008270
Mtr3g0673 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
Mtr3g0673 163 SUPERFAMILY AN1-like Zinc finger 87 157 IPR035896 -
Mtr3g0673 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0673 Mtr-Chr3 9345951 9346999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0673 21 163 C2H2 Transcription Factor Family AT3G52800 38.650 4.54e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0673 - - mtr:MTR_3g028010 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0673 3 9345951 9346999 Mtr8g1143 8 13928092 13928960 ECH
Mtr3g0673 3 9345951 9346999 Mtr3g0673 3 9345951 9346999 ECH