Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0665 ATGGTTCGCTCCAATGGCGTCAAGCTTCTTCTTCGTTCTCTCTCCCCTAATCTCCTCCGCAACAAATCCGTATATGAAGGAGTGTTGCAAAGGGGATATAGGACATTGAATTCAGGATTATGCAATCGTTCTTCCAAAGTTACTGGAAATTATTTTCACAATGTTGGAGATGGTGTTAAATTGAAGAACTGGGTGCTATTGGGAGCAGCAAATACTTATTTGGGGGCAACTAGATCTATTCATGGATCAGCACCATTGGCAAAGGACTTTTATGATGTTCTTGGAATCAGTAAGAATGCAAGTTCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAAAAGTTACATCCTGACACAAACAAAGATGATCCTGAAGCTGAAAAGAAATTTCAAGAAGTTTCAAGGGCATATGAGGTTTTGAAGGACGAGGAAAAGCGTCAAGAGTATGATCAGGTTGGCCATGAAGGTTTTGTAAACCGAGAAAATGGTTCTGATGGTGGCTTTGGTCCCTTTGGAGATGGTGGCTTTCCCTTTAATCCTGATATTATCCATGACATCTTTAATCGGAACATTGGCGGACAGGATGTTAAGACGTTTGTTGAACTTTCCTTTATGGAAGCTGTCCGTGGATGCGCCAAAACCATTACATTTCAAACAGATATGATTTGTAACACTTGTGGTGGCAGTGGGGTTCCTCCTGGTACAAGACCTGAAACCTGCAAGCGTTGTAAAGGGTCAGGAGTGACATCTGTACAAGCTGGCATATTTAGGATGGAGACTACATGTGGTGCATGTAGGGGATCTGGCAAAATTGTCAAGAGTTTCTGCAAGTCATGCAAGGGTGCAAAGGTTAACAGAGCAACCAAGTCAGTCAAATTGGATATTATGGCTGGGATTGACAATAATGAAACCATCAAGGTTTACAGAAGTGGTGGTGCAGATCCTGAAGGAGATCGACCTGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTCTTCCGTAGAGAAGGATCGGATATTCATGTAGATACTGTATTAAGCATCACTCAGGCCATTTTGGGCGGAACCATTCAGGTCCCAACTCTTACTGGGGATGTTGTTCTCAAGGTGCGTCCTGGAACACAACACGGTCAGAAGGTGGTTCTGAAACAGAAAGGGATCAAGACCAAAAAGTATAACTCATTAGGCAATCAATACGTTCATTTTAACGTCAGCATCCCAGTAAACCTGACAGATAGACAGCGGGAATTGATTGAAGAGTTTCAGAAAGAAGAGCAATATGAATCTTCCGATAAAGGAAAAGCTGCTTCGGCTTCTGGTTGA 1332 0.4234 MVRSNGVKLLLRSLSPNLLRNKSVYEGVLQRGYRTLNSGLCNRSSKVTGNYFHNVGDGVKLKNWVLLGAANTYLGATRSIHGSAPLAKDFYDVLGISKNASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSRAYEVLKDEEKRQEYDQVGHEGFVNRENGSDGGFGPFGDGGFPFNPDIIHDIFNRNIGGQDVKTFVELSFMEAVRGCAKTITFQTDMICNTCGGSGVPPGTRPETCKRCKGSGVTSVQAGIFRMETTCGACRGSGKIVKSFCKSCKGAKVNRATKSVKLDIMAGIDNNETIKVYRSGGADPEGDRPGDLYVTIKVREDPVFRREGSDIHVDTVLSITQAILGGTIQVPTLTGDVVLKVRPGTQHGQKVVLKQKGIKTKKYNSLGNQYVHFNVSIPVNLTDRQRELIEEFQKEEQYESSDKGKAASASG* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0665 443 Gene3D - 331 440 - -
Mtr3g0665 443 CDD DnaJ_C 195 413 - -
Mtr3g0665 443 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Mtr3g0665 443 Gene3D - 199 326 - -
Mtr3g0665 443 ProSiteProfiles dnaJ domain profile. 89 154 IPR001623 -
Mtr3g0665 443 Gene3D - 224 284 - -
Mtr3g0665 443 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 286 IPR036410 -
Mtr3g0665 443 Pfam DnaJ domain 89 151 IPR001623 -
Mtr3g0665 443 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 30 443 - -
Mtr3g0665 443 CDD DnaJ 89 143 IPR001623 -
Mtr3g0665 443 Pfam DnaJ C terminal domain 200 410 IPR002939 -
Mtr3g0665 443 Gene3D DnaJ domain 86 198 IPR036869 -
Mtr3g0665 443 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 443 - -
Mtr3g0665 443 SMART dnaj_3 88 146 IPR001623 -
Mtr3g0665 443 ProSiteProfiles Zinc finger CR-type profile. 211 289 IPR001305 GO:0031072|GO:0051082
Mtr3g0665 443 SUPERFAMILY Chaperone J-domain 88 176 IPR036869 -
Mtr3g0665 443 SUPERFAMILY HSP40/DnaJ peptide-binding domain 193 337 IPR008971 GO:0006457|GO:0051082
Mtr3g0665 443 PRINTS DnaJ domain signature 91 109 IPR001623 -
Mtr3g0665 443 PRINTS DnaJ domain signature 109 124 IPR001623 -
Mtr3g0665 443 PRINTS DnaJ domain signature 126 146 IPR001623 -
Mtr3g0665 443 PRINTS DnaJ domain signature 146 165 IPR001623 -
Mtr3g0665 443 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 421 IPR008971 GO:0006457|GO:0051082
Mtr3g0665 443 Hamap Chaperone protein DnaJ [dnaJ]. 86 439 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mtr3g0665 443 CDD DnaJ_zf 224 284 IPR001305 GO:0031072|GO:0051082
Mtr3g0665 443 Pfam DnaJ central domain 224 284 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0665 Mtr-Chr3 9144979 9154950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0665 91 151 C2H2 Transcription Factor Family AT1G74250 45.455 1.22e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0665 K03686 - gmx:100784630 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0665 3 9144979 9154950 Mtr3g0665 3 9144979 9154950 ECH