Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0650 ATGGTAACCATTATTGCTTCTCACACCGTGATTCCAGAAGATGCAACTCCACAAGGTTGTTTATGGCTTTCTGATATAGACCAAGTGGTAAAGCTCCGCCACACACAAACCATTTATATTTACAAATCAAAACAAAACACAGATAAAGCCATAGAAACCCTAAAGAATTCACTCAGCAAAATCCTAGTTTACTACTATCCTGTAGCTGGTCGTTATTGTTACAAAGAAGGTGGTAGAATAGAGTTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGATTTTTCACCTTCTGATTCAACCATGGAGCTTGTTCCAATAATAGATTACAATCAACCAGTGGAAGATATTCCATTGTTTGTGGTTCAACTCACAAGATTTCAAAACAAAGATGAAGGTCTTGCAATTGGTATTGCTTATTCTCACCCTTTATCAGATGGACTTGGAGCCATTAGACTCATCAACTCATGGGCCAAAATAGCAAGAGGAGAAACCCTTGAGGTAAATGAGTTACCCTTTTTAGATAGAACAATACTCAAATTCTCACACACGCCATTGGTACGGTTTGAACACAAGGAGTTGAAGCCACTACCACTCATTCTAGGAAGAAAAGACACAAGTGAAGAAAAAAAGAAGAAAACTTCAGCAACATTGTTGCGACTTTCGCCGGAACAAGTTGATAAGTTGAAGAAAAAAGCAAATGAAAATGACATTCTTGCAATCAAGAATAAAGGGTCAAGGCCATTTAGTAGATACGAAGCAATTAGTGCACATATATGGAAATGTGCTTCTAGGGCACGTGAGCTTGAAGAGAATCAAGAAAGTGTAGTTAGATTCAATGCTGATATTAGAACAAGATTGGTTCCACCTCTTCCAAAGAACTATTTTGGGAATGCTTTGACACAAACAGCAGCAATAGGGTATGTTGGAGAAATCACATCAAAGCCTTTAGGTTATGTTGCACAAATGATAAGGGAAGCAACTGAGTTAGTAAGTGATGAGTTTATAAGGTCACAAATTGATGTTATTAGGGGTTTTGAACATTTGGATGATGCAAGGAAATTGTTTATGGGTGGTGTAGGAGAAAATATTCCATATTTTGGAAATCCAAATTTTAATTTTACTAGTTGGATGAGTATGCCTATTTACGAAGCTGATTTTGGATGGGGGAAGCCTGTTTATTTTGGATTAGCTTTTGTGTCTCCACATGATAGGGCAGTGATTCTTCATAGTCCTGATGGAGATGGATCTGTTCTTGTGTGTTTGCATTTTCAGATTGCACTTTTAGAGCTTTTTAAGAAGTTCTTCTATGGGGATATATGA 1356 0.3709 MVTIIASHTVIPEDATPQGCLWLSDIDQVVKLRHTQTIYIYKSKQNTDKAIETLKNSLSKILVYYYPVAGRYCYKEGGRIELNLNAKGAILLEAETTKTIHDYGDFSPSDSTMELVPIIDYNQPVEDIPLFVVQLTRFQNKDEGLAIGIAYSHPLSDGLGAIRLINSWAKIARGETLEVNELPFLDRTILKFSHTPLVRFEHKELKPLPLILGRKDTSEEKKKKTSATLLRLSPEQVDKLKKKANENDILAIKNKGSRPFSRYEAISAHIWKCASRARELEENQESVVRFNADIRTRLVPPLPKNYFGNALTQTAAIGYVGEITSKPLGYVAQMIREATELVSDEFIRSQIDVIRGFEHLDDARKLFMGGVGENIPYFGNPNFNFTSWMSMPIYEADFGWGKPVYFGLAFVSPHDRAVILHSPDGDGSVLVCLHFQIALLELFKKFFYGDI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0650 451 Gene3D - 1 207 IPR023213 -
Mtr3g0650 451 Pfam Transferase family 1 447 - -
Mtr3g0650 451 Gene3D - 213 449 IPR023213 -
Mtr3g0650 451 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 451 - -
Mtr3g0650 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0650 Mtr-Chr3 8819967 8821817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0650 2 448 Monolignol Biosynthesis Gene Families AT5G48930 32.812 2.16e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0650 K13065 - gmx:100779814 551.592