Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0640 ATGGCTGCCATCCGAGTCCTCTCTACAGATACAATAAAGGCACCAAATTCAACTGATGAAAAAATTGATCTTACTCCATGGGATCTCAAGGTTCTACTTGTTGAACCCACCCATAAGGGTCTCCTTTACCACCATCCTCTAGAGTCAAACCAAATTCCACAGCTAAAACAATCTCTATCATCTACTCTTGCTTTTTTCCCACTACTTGCAGGCCGTCTAGAAATAACAGACCATGAAGACAACACCATGTCGTGTTCGGTCACGTGCAACAATGCCGGTGTACTCTTTGTCCATGCTACAACTGAGAACACTTGTGTAGGTGACATACTTGGATGCACCTATATTCCTCCCATTCTCAATTCATTTTATCCACTGAACGGAATCAAAAACTACGAAGGCACATCACAACCATTGTTTGCCGTGCAAGTGACAGAGTTAGTTGACGGCATCTTTATTGGTTTTACTTTTAACCATGTGGTTGTTGATGGAACTTCGGCATGGTATTTCATTAATTCGTGGGCTGAAATCTCACGTGGTGGTTGTTGCAATCAAACATCCAAACTCTCAACACTTGAACGTTGGTTTCCAGATGGTATTCAATGTCCCATACGATTTCCCTTCACTAAGAAGCTACAAAATAACCAATCTGATGGGTTGAGTTTTTCATCATCTAATAACGAAAAACTAAATAACGAAAAACTCAACCCATCAGTTAGGTTATTTCATTTCACAAAGGAGAAAATCTCTCAATTGAAATTGAAAGCCAACTTAGAAACGGGTACGAACAAAATATCTTCCCTTCAAGCACTTTTTGCACACCTTTGGTGCTCAGTGATCCGTTCCGACCAATTAGACCCACAAGAGAACGCATATTTTATGGTCGGGATAGGAGTTAGACAAAGGTTTGTTCCACCATTGCCGGAAGATTATTTTGGAAATGCTGTTGTAGCTTCTATGGTTGCAATGAAAGTTGGGGAGTTGTTGGAAGAAGGCGGGTTTGGTAAATGTGCTTGGAAGATGCACGAAACGATTTGTTTGCACTCAAATGAGAAGTTGAAGAATGACTATGAGAATTGGGTGAGAAATCCAATCATCTATAGACTTGGTGATAGTAACGTTGCCGATTATCATGTGTTGGCTAGTAGCAGTTCCCAGTGGTTTGATGTTTATGGCAATAATTTTGGATGGGGAAAACCAGTGGCAGTTCGCAGTGGAAATAAACAAAGTGGACTGTTTGCTGTATTTGCTGGAATAGAAGAAGGTAGTATGGACCTTCAAGTATGTCTTCCTCACAAGATTTTGGAGGCAATGGGAAATGATCCTGTTTTCATGAACTTTGTATCCAATTAA 1350 0.4052 MAAIRVLSTDTIKAPNSTDEKIDLTPWDLKVLLVEPTHKGLLYHHPLESNQIPQLKQSLSSTLAFFPLLAGRLEITDHEDNTMSCSVTCNNAGVLFVHATTENTCVGDILGCTYIPPILNSFYPLNGIKNYEGTSQPLFAVQVTELVDGIFIGFTFNHVVVDGTSAWYFINSWAEISRGGCCNQTSKLSTLERWFPDGIQCPIRFPFTKKLQNNQSDGLSFSSSNNEKLNNEKLNPSVRLFHFTKEKISQLKLKANLETGTNKISSLQALFAHLWCSVIRSDQLDPQENAYFMVGIGVRQRFVPPLPEDYFGNAVVASMVAMKVGELLEEGGFGKCAWKMHETICLHSNEKLKNDYENWVRNPIIYRLGDSNVADYHVLASSSSQWFDVYGNNFGWGKPVAVRSGNKQSGLFAVFAGIEEGSMDLQVCLPHKILEAMGNDPVFMNFVSN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0640 449 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 446 - -
Mtr3g0640 449 Gene3D - 214 439 IPR023213 -
Mtr3g0640 449 Gene3D - 1 201 IPR023213 -
Mtr3g0640 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 446 - -
Mtr3g0640 449 Pfam Transferase family 5 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0640 Mtr-Chr3 8599961 8601521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0640 27 429 Monolignol Biosynthesis Gene Families AT5G48930 26.066 4.34e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0640 - - mtr:MTR_4g022760 488.419