LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g0637	ATGTGGAAATTTAAGCCATTCGCGCATAAAGAGCAAAATGGTCTTGAAGGCCGTTCTATAGACGTTGGTAATCTCAAACTACATGTCCACAAGCTCATTGCTGAAGGAGGGTTCTCATGTGTTTACTTGGCTCGTGATGCTGTACATATGTCAAAACAGTATGCTTTGAAGCACATAATATGCAACGATGAAGAATCACTTGGATTAGTGAAGAAAGAGATATCTGTGATGAAGTTGTTGATTGGACATCCCAATGTTGTCACCCTTCATGCCAATGCCATCTATGATATGGGTAGGACAAAAGAGGCATTCCTTGTAATGGAATTTTGTGAGAAGTCTCTGGTTAGTGTGCTGGAGAGCCGTGGTGCTGGTTATTTTGAAGAGAGGCAGGTTCTTTTAATCTTCAGGGACGTGTGTAATGCAGTCTTTGCCATGCACTGCCAGTCCCCGCCTATTGCTCACCGAGACTTGAAAGCAGAAAATCTTCTGTTGGGTTCAGATGGTTTATGGAAATTGTGTGATTTTGGAAGCATTTCCACAAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGAATTGAGGAAGATAATATCAGAAAGTACACAACCCCTGCCTACAGACCCCCCGAGATGTGGGATCTGTTCCTGAAAGAAGTCATTAATGAGAAAGTGGACATATGGGCACTTGGGTGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATCTACCTAAATTCAATTCAACCCTCACAGACTTGATCAGAGACATGCTTCAAGCTCGACCAGACGACAGACCAGATATCACGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCCATTGATTTACAAAAGTCATTACCTGACAGGCCACCTGAATCGCCCGCTTCCAACAATCATGAAGGTGCTTCAATGTCCACAAACAAATCAAGTGCAATGCCTCGCAGAAATCCACCTCCTCCTCCATCAGTTGCAGAACCCAAAACTACCCCTCAGCCATCTCTTGCTTCTAGGGGAGGGGAAAGTGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCTGCATGCAAAGGATTCACGTGTCCCCGAGGAAAAGGGCAAACCTGTATATGATGAAGAACGATCTAGCCACCACAGAGTTCGTCCGGACAATGATCAGTTACCGAAAAATGTTAGTACTAACAAAGTGACTAACTCACAAACTCAGACTGTAAAAAGCAGTATACATGGAAAGTTGCACAAACCTGAAGCTGTATCTTCCAAGGACTTTGAAATAAATTTTTTCCCAGATAAAGGTCATGCAAATGAGAAGCAAATGTCAAATCTGGAGAAGAAAAATAATAATTTTCAAGACCAGTCTTTTAACACTTTTGTTGCAGAGTTTGATACCGCTAAGCTAAGCTCCGGGCATGGTAACAAATCCACAAGGGAAGAAGCATTAGAGTCTGAGGTGGAGAAACTCAGGGAGCAGCTGAAGGAAGCTAACTTAGAGAAATCTGAAATCACTGCCAAGTATGAAAAGCTTACTGCTATTTGCCGTTCACAAAGACAAGAATTGCAGGATCTCAAGCAAACACTTGCAGCAAAAACTCCATCTCCTAGTAGAGAAGGTTTCAGAACCTCTCCTGGAGTTGCATCATCTGCATCTTCGGATAGAAGTGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATCATGGCAACCTTTCTCGGAGGAAAGCGAACCGTTTAAATCCCTTTCAGCAGACAATGCTTCAAAATCTGTTAGGTCAAGAAATGGTCAGCAGAGCAAGCCGGCTACTCAACCAGCTGCTGATTTTGATTCTTGGGGTTTTGGTGCAGATACATTTAGTGCTGCTCGTGCTGGTAGTGGTAGCCCACAGATGCCAAGACCTGGTGAAGGGAGTACAGCTCATGTTTTCCGTGAGGCGAAGGGTTTTGAGAGCAAATCAACTTCTCAACCTGCTGGATGGGCTGGTTTTTAA	2034	0.4371	MWKFKPFAHKEQNGLEGRSIDVGNLKLHVHKLIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKLLIGHPNVVTLHANAIYDMGRTKEAFLVMEFCEKSLVSVLESRGAGYFEERQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSISTNHKRFEKPEEMGIEEDNIRKYTTPAYRPPEMWDLFLKEVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKFNSTLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPESPASNNHEGASMSTNKSSAMPRRNPPPPPSVAEPKTTPQPSLASRGGESGGQLGAFWSTLHAKDSRVPEEKGKPVYDEERSSHHRVRPDNDQLPKNVSTNKVTNSQTQTVKSSIHGKLHKPEAVSSKDFEINFFPDKGHANEKQMSNLEKKNNNFQDQSFNTFVAEFDTAKLSSGHGNKSTREEALESEVEKLREQLKEANLEKSEITAKYEKLTAICRSQRQELQDLKQTLAAKTPSPSREGFRTSPGVASSASSDRSEWKTPSSEPKSSWQPFSEESEPFKSLSADNASKSVRSRNGQQSKPATQPAADFDSWGFGADTFSAARAGSGSPQMPRPGEGSTAHVFREAKGFESKSTSQPAGWAGF*	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g0637	677	PANTHER	NUMB-ASSOCIATED KINASE, ISOFORM A	1	665	-	-
	Mtr3g0637	677	SUPERFAMILY	Protein kinase-like (PK-like)	27	339	IPR011009	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	403	425	-	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	374	402	-	-
	Mtr3g0637	677	CDD	STKc_GAK_like	29	298	-	-
	Mtr3g0637	677	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	663	677	-	-
	Mtr3g0637	677	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g0637	677	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Mtr3g0637	677	Gene3D	Transferase(Phosphotransferase) domain 1	10	305	-	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	542	677	-	-
	Mtr3g0637	677	Coils	Coil	487	542	-	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	301	429	-	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	542	619	-	-
	Mtr3g0637	677	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	665	-	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	309	331	-	-
	Mtr3g0637	677	MobiDBLite	consensus disorder prediction	332	346	-	-
	Mtr3g0637	677	Pfam	Protein kinase domain	28	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g0637	Mtr-Chr3	8576369	8581617	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g0637	26	292	Miscellaneous Gene Families	AT2G34180	29.893	3.46e-20	92.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Mtr3g0637		Pkinase	5.5e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g0637	K08853		-	gmx:100808507	1013.45