Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0627 ATGATGGCAAGTTCAAGAGAAGGAAATTATCAAGCAAAGCAAGAAGGAGGTGATACTAGTATGGAAAATATTGAAAAAATTTCAAAGGCACCTTCAAGTACATCAAGACAATGGTCAACATCAAGTTTAAGAAATCCAAGAATTGTGAGAGTATCAAGAACATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATAAGAGGGTTAAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAATTATATGATCTTCAAGATAAACTTGGTTTAGGACAACCAAGTAAAGTAATTGATTGGTTACTTGAAGCAACAAAATTAGACATTGATAAACTCCCTCCACTTCAATTTCCTCAAAGCTTTTCACAATTTCATCCTCTTCATTCACAAACCCTACTTCCTTTTCATGATCAATCAAGTAATATTGCTTCTCATGAACTTTCTCTTGGTCCTTTATATGATCCTAATTCCACATTTGTTGGAATTCAAAATCTTATGGCAAGGTCAAAATTTTGGGACATAGATTCAAGGACTAAAGGTAAAGAAGTTGAAAGAGAGTACTTTAGTGAAAAGGATAAGTGGATCAAAACAAATGAGGAAGAAAATCAAGTTGGAGAAGCTAGTTACAATAATTTTCATCAAGTTTCAACTCAAAAGCTTTTCCCTATGGAGACTCATTCTAATTTTCTTAACAATGCTATGTCATATAACAACTACCATTCAGAAGCTTCTAGTTTGTCTTTATCTCAATTTGGAAGTAGTAATGGATTGTTCCAATCTCATCATCAACAAGTAGATCCAAATCAAAGTAATGGAAATGGTTTACACTTCCCATTTCCTTTTGCAAATTCACAATTATTGTTTGGTCCTTCTTCTTCTTCTACTACACCATCATCATCACATTTGAGTAGTACTCCTTTTATGAACAATCCAGTTGAAAATGATCCAAGAATACAATTCAACCATTTTCAGTTCATAAACTCAAGCTCTTCACAAACTATGCCTCATCCTCTCATTCCATCTTTTCATCACTCATTCAATTCACCTCCGGTTAGACCTTTTCCGATACCATTTAGCTCCAAGCTTCTTGATTCTAATAACAATAACAATAGTAACCAACTGGATGATAATAGTGCTCCTCGTTCTTGA 1158 0.3402 MMASSREGNYQAKQEGGDTSMENIEKISKAPSSTSRQWSTSSLRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLGQPSKVIDWLLEATKLDIDKLPPLQFPQSFSQFHPLHSQTLLPFHDQSSNIASHELSLGPLYDPNSTFVGIQNLMARSKFWDIDSRTKGKEVEREYFSEKDKWIKTNEEENQVGEASYNNFHQVSTQKLFPMETHSNFLNNAMSYNNYHSEASSLSLSQFGSSNGLFQSHHQQVDPNQSNGNGLHFPFPFANSQLLFGPSSSSTTPSSSHLSSTPFMNNPVENDPRIQFNHFQFINSSSSQTMPHPLIPSFHHSFNSPPVRPFPIPFSSKLLDSNNNNNSNQLDDNSAPRS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0627 385 MobiDBLite consensus disorder prediction 25 43 - -
Mtr3g0627 385 MobiDBLite consensus disorder prediction 360 385 - -
Mtr3g0627 385 MobiDBLite consensus disorder prediction 363 385 - -
Mtr3g0627 385 ProSiteProfiles TCP domain profile. 57 115 IPR017887 -
Mtr3g0627 385 Pfam TCP family transcription factor 57 184 IPR017887 -
Mtr3g0627 385 MobiDBLite consensus disorder prediction 1 43 - -
Mtr3g0627 385 PANTHER TRANSCRIPTION FACTOR TCP17 1 380 - -
Mtr3g0627 385 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 380 IPR005333 GO:0003700
Mtr3g0627 385 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0627 Mtr-Chr3 8461088 8462927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0627 40 381 TCP Transcription Factor Family AT5G60970 40.000 2.99e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr3g0627 TCP 9.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0627 - - cam:101498052 525.783