Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0622 ATGGAAGAAGCTCAAGACATGGTTGCTGCAGCTCAACACATTATAAAAGCATTATCTTCAAGCAAAACTGTCTCTAATGAGTTGAGAAAAACTCTCTTGGATCTTGAGTTCCAATTGTGTTCAATCAATGAAAGAAAGGAAAGTTGCATCAAACAATTAGAGAGAAAGCTTAAATGTGTTGAAGATAAGGTAATGAGTTTGGAGACTAATCATGGAATCATATCTTCTTCTGAGTATTTAAAACTTGTTGGTGAAATTCAAACTTTGCAACAAAACTTTGATTCTATGAATGAAAATTGGAAGCAGAAGGAACTTGTTCAAAGGGCTAATGGAATTTTGCAAGTTGTTATGTCAAGGCTTGAGGATGAGTTGGTTCAAATTCTTCTTAATCATATGCAATATTTTGAGCCTGATTACATGTCTTTCAATTCCAACAGAGTTGATATTGTGTATGATGGATCATTTGGTTCAGTTGAGGATGAAAATATCAACGAGGCGTCGCAGAGCAGTGATGGTGGTCGATTCGAAGAAAGCAGTACTATAGATTTGGTGCATCCTTCTGTACTTGAAGATCTCAAAAGCATTGCTAAAGCTATGTTTGCTTCAAATTACCATCAGGAGTTTTGTCATGTCTTCATTGCTTCTAGAAGAGAAGCCTTGGCTGAGTACTTTGTCATTCTAGAAATCGAAAAACTAAGCATCGAAAGTGTGCTTAAAATGGAGTGGCATTGTTTGAATAGCCGGATAAAGAAATGGATTCGGGCGATGAAGGTCATTGTTCAGACGTATCTTGTTAGCGAGAAACGATTGTGTAAGCAGATTCTTGGTGACTTTGGATCCATTTATCAGCTTTGTTTCTCCGAAATATCTCGGAGTTCGGTCTTGTGCCTTTTAAATTTTGGTGAGGCCATAACAATGGGAACACACACACCCGAAAAACTGTTTTGTTTGCTTGACATGTATGAGGTTTTGGAACTTCTAGCAGTGGATATAGATATTCTGTTCATTGAAGAAGTTGATTCTTTTGTCAGAGGAGAATTTCACAAACTTCTAAGAAGCTTTGGTGATACTATAAAATCTACATTTCTTGCATTTAGAAATGCTATTGCAACAAATCCATCAAATAAATGTTTTCCTGGTGGAGGTGTTCATCATCTTACAAGATATGTCATGAATTACATCAAGGCACTTGTTGAATATGGTGATAGCCTTAATCTTCTTATTGAGGATGAAACTTCGACCGATCTTGCGGCTAGTGATGACAACGGTGAAAATTCTACTCTCTCATGTTGTCCAATTGCTTGTAACTTAAGGCAAATCACTGCCACTCTAGAATCCAACTTATGCAACAAATCAAAGTTATACACTGATGTTGCTTTGCAACATATTTTCATGATGAATAACATTCATTACATGGTTCAAAAGGTTAAGTGTTCTAAAAACCTATGCAATTTCTTTGGAGATTTCTGGCTTCGCCGACATGTTGGCATGTTTCAGCATTATGCTAGAAGCTATGAGAAGGTGACTTGGAGTGCAGTACTTTCTGTGTTCAGTGAGGAAAGTTTATCGAATTGCAGAGTGAAGAGAAAACTAAAGAAAAAATGCAAAGATTTTAGTACTGCTTTTGGTGAAGTATACAAAACACAGACGGGGTGGAGTGTACCTGATAAAGAACTTCGCGAAGACCTACAAATATCGGTTTCTCAGAAATTGATTCCTGCTTACCGAAGTTATACAGGTAGAAACTCGTCTAACATTGATGAGAAGTGGATCAAGTATACGGTCGATGATCTACAATGTTATATTTTGGATCTTTTTCATGGTTCACAAAAATCTTTGCACCATTCTCAGCATAGAAAGTGA 1863 0.3677 MEEAQDMVAAAQHIIKALSSSKTVSNELRKTLLDLEFQLCSINERKESCIKQLERKLKCVEDKVMSLETNHGIISSSEYLKLVGEIQTLQQNFDSMNENWKQKELVQRANGILQVVMSRLEDELVQILLNHMQYFEPDYMSFNSNRVDIVYDGSFGSVEDENINEASQSSDGGRFEESSTIDLVHPSVLEDLKSIAKAMFASNYHQEFCHVFIASRREALAEYFVILEIEKLSIESVLKMEWHCLNSRIKKWIRAMKVIVQTYLVSEKRLCKQILGDFGSIYQLCFSEISRSSVLCLLNFGEAITMGTHTPEKLFCLLDMYEVLELLAVDIDILFIEEVDSFVRGEFHKLLRSFGDTIKSTFLAFRNAIATNPSNKCFPGGGVHHLTRYVMNYIKALVEYGDSLNLLIEDETSTDLAASDDNGENSTLSCCPIACNLRQITATLESNLCNKSKLYTDVALQHIFMMNNIHYMVQKVKCSKNLCNFFGDFWLRRHVGMFQHYARSYEKVTWSAVLSVFSEESLSNCRVKRKLKKKCKDFSTAFGEVYKTQTGWSVPDKELREDLQISVSQKLIPAYRSYTGRNSSNIDEKWIKYTVDDLQCYILDLFHGSQKSLHHSQHRK* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0622 620 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 15 613 - -
Mtr3g0622 620 Gene3D Exocyst complex component Exo70 55 615 - -
Mtr3g0622 620 Pfam Exo70 exocyst complex subunit 250 603 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr3g0622 620 Coils Coil 43 70 - -
Mtr3g0622 620 SUPERFAMILY Cullin repeat-like 65 607 IPR016159 -
Mtr3g0622 620 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 613 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0622 Mtr-Chr3 8397453 8399742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0622 10 606 EXO70 exocyst subunit family AT5G61010 43.719 4.80e-168 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0622 K07195 - gmx:100791622 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0622 3 8397453 8399742 Mtr3g0622 3 8397453 8399742 ECH