Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0617 ATGGCAGTTCAAAGCTCCATTTCCAGTAAACCACAAGATCCGAACAACGTTTCTCGCGACCATTTCTTCGTATGGAGGGAGTTTGTATGGGGAGCTGTTGCGGGTGCTTTTGGGGAAGGAATGATGCATCCGGTAGATACCATCAAAACACGAATACAAAGTCAAGCTATTCTAAATGGTGTTAAGAACCAGAAAGGCATATTGCAGATGGTGCGGTCTGTCTGGAAGATTGATGGATTAAGAGGCTTTTACAGGGGTGTAGTACCTGGTGTTACTGGCTCTCTTGCGACTGGTGCAACGTATTTTGGTGTCATAGAGTCAACTAAAAAGTGGATTGAGGATTCACATCCTAGCCTTGGGGGCCATTGGGCACATTTCATTGCTGGAGCTGTTGGAGATACACTTGGTTCTGTAGTATACGTTCCATGCGAAGTGATAAAGCAGCGCATGCAAGTTCAAGGCACAATTACATCCTGGAGTTCTACTGCAATGAAGAATGGCATTGCAATAAAACCTGGTGCAGAAATTTATGATTATTATAAAGGGATGTTCCATGCAGGCAGCTCAATATGCAGAACACAGGGTTTAAAGGGTTTATATGCAGGATATTTGTCTACACTGGCAAGGGATGTACCATTTGCTGGCTTGATGGTTGTGTTCTATGAAGCTTTGAAAGATGCTACAGAGTACGGGAAGAAAAGATGGATATCTAATCCAAATTGGCATGTTAACAATTCCTTTGAGGGATTGGTTTTAGGAGGATTGGCTGGTGGTCTCAGTGCATATCTCACGACACCTTTGGATGTCGTCAAAACTAGGCTGCAAGTTCAGGGTTCAACGTTGAGGTATAATGGTTGGTTGGATGCAATTTACAACATATGGGCTAAGGAAGGAGTTAAGGGGATGTTTAGGGGTAGCGTCCCCAGAATTGCGTGGTACATTCCTGCTTCAGCGCTTACTTTCATGGCTGTGGAATTTCTCAGAGAAAATTTTAATGAAAGAGTGCCCAATGGTGGTTCGATCAATGTTGCTAGAGTATCAGTAGAAAAGAAGAAATCTTTGGAGGAGGCTAGTTAA 1077 0.4336 MAVQSSISSKPQDPNNVSRDHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQAILNGVKNQKGILQMVRSVWKIDGLRGFYRGVVPGVTGSLATGATYFGVIESTKKWIEDSHPSLGGHWAHFIAGAVGDTLGSVVYVPCEVIKQRMQVQGTITSWSSTAMKNGIAIKPGAEIYDYYKGMFHAGSSICRTQGLKGLYAGYLSTLARDVPFAGLMVVFYEALKDATEYGKKRWISNPNWHVNNSFEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTLRYNGWLDAIYNIWAKEGVKGMFRGSVPRIAWYIPASALTFMAVEFLRENFNERVPNGGSINVARVSVEKKKSLEEAS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0617 358 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 355 - -
Mtr3g0617 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 227 IPR018108 -
Mtr3g0617 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 111 IPR018108 -
Mtr3g0617 358 SUPERFAMILY Mitochondrial carrier 22 327 IPR023395 -
Mtr3g0617 358 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 355 - -
Mtr3g0617 358 Gene3D Mitochondrial carrier domain 3 167 IPR023395 -
Mtr3g0617 358 Gene3D Mitochondrial carrier domain 168 348 IPR023395 -
Mtr3g0617 358 Pfam Mitochondrial carrier protein 246 333 IPR018108 -
Mtr3g0617 358 Pfam Mitochondrial carrier protein 122 227 IPR018108 -
Mtr3g0617 358 Pfam Mitochondrial carrier protein 23 114 IPR018108 -
Mtr3g0617 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 330 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0617 Mtr-Chr3 8336298 8343048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0617 123 337 Chloroplast and Mitochondria Gene Families AT2G30160 25.116 2.72e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0617 - - gmx:100790921 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0617 3 8336298 8343048 Mtr3g0617 3 8336298 8343048 ECH