Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0614 ATGGAGTCGCAACAAGGAAGGTTAATACCTTTGGGAGTCACACTTGTACCTTGGAATCGTATTAATTACGATGGTGGTGTCAATGAATTAATCCTTGATGCTCTTGATATAATGGATGCTTTTGGTTTCACTAATAATTTAACAAGTTCTGATTTATGCATAGAACCCTTCAAAAAAATTCTAAGTGGAGTTATGGAGCAGCCACGATATATAAGAAGTTCTATAAATGTAGGAAGTGATCATGTAATGATTCTCGATGCTGTTGATCTAAATCTCGCTCGTCCTCATCATACTCATGCTACAAATCGATCAACAAGGTTCACTCTCTTGCGTCCTTATGTTGTTCGCCACCATAACCTCAGCAACGAGGTTCAAACTACGACCAGAAATACTGAAACTATCGAACGACATTCTTATCGTTATCTTTCAAAAATTAGAGTTGAAGAAGGAATGGAGTCTGAAGAAATGATGTGTTCTATTTGTTTGGTTGAGCTTTTGGTTGGAACGCAAGCAACTCGGTTGTGGTGTTCGCATTTGTATCACGAAGGATGTATTATGAAATGGCTTTGTAGATCAAACACTTGCCCTTTGTGTCGTCAGATTGTTCAGAATATGTGA 618 0.3803 MESQQGRLIPLGVTLVPWNRINYDGGVNELILDALDIMDAFGFTNNLTSSDLCIEPFKKILSGVMEQPRYIRSSINVGSDHVMILDAVDLNLARPHHTHATNRSTRFTLLRPYVVRHHNLSNEVQTTTRNTETIERHSYRYLSKIRVEEGMESEEMMCSICLVELLVGTQATRLWCSHLYHEGCIMKWLCRSNTCPLCRQIVQNM* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0614 205 Pfam Ring finger domain 157 199 IPR001841 -
Mtr3g0614 205 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
Mtr3g0614 205 SUPERFAMILY RING/U-box 143 203 - -
Mtr3g0614 205 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 123 200 - -
Mtr3g0614 205 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 123 200 - -
Mtr3g0614 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 204 IPR013083 -
Mtr3g0614 205 SMART ring_2 158 198 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0614 142 199 C3H Transcription Factor Family AT4G12190 47.619 6.71e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0614 - K22378 mtr:MTR_3g025550 96.6709