Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0613 ATGGCAGGGGTTGTTGGTGGGGCATTTCTTTCGTCTGTCTTTCAAGTGATTCGAGAGAGGTTGGCTTCTCAAGATTTCAGAGACTACTTCCATGAAAGGCTGTGGAAAAAACTTGAAATCACACTAGATTCTATCAATGAAGTACTGGATGATGCAGATATAAAGGAGTACCAACACCGAAACGTGAAGAATTGGCTTGATGATCTCAAACATGATGTATACGAATTAGAGCAACTATTCGATGTGATTGCTACTGATGCACGATCAAAGGGAAAGATGCGACGCTATCTTTCACTTTTTATTAAGCGAGGATTTGAAGATAGGATTGAAGCATTGATACAGAACCTAGAGTTTCTTGCTGATCAAAAGGATAGATTGGGACTTAACAAATTTACTAGTGGTGATTGTGAAATTGGAGTCTTGAAATTGTTAAGAGAATTTAGAGCTGTATCGAAAAGTTGTAATGACATATTTGTTGGTAAAGATGGTAGAGTCATCCCCCGGATATTACCAACTGCACCTTTGATGGATAAATCTGCGGTGTATGGTAGGGAGCATGAGATAGAGGAAATGACTGAATTTTTACTTTCAGACAGTTACAGTGAAACCTTTGTACCCATAATCAGTATAGTGGGTGTGATTGGGATGGGTAAGACAACCATTGCCCGACTTGTTTACAACGACCACAAGATACATGAGCAATTTGAACTTAAAGCTTGGGTCTATGTTTCAGAATCTTTTGATCTTGTTCATCTCACCCAAGCAATTCTCAGGGAATTTCATTCTTCAGAAACGTATAGTGAAGACATGGAAATACTCCAACGTCAATTGCAACAGAGACTAGCTGGCAAGAAGTACTTGCTTGTTTTAGACAATATCTGGAACGAGAATGTGGAATGTAGGAAGAAGCTACTACTTCCATTTAGCAATGGATCCTCTGGAAGTAAGCTTATCGTGAGGACGCCTCACAATGAAGTAGCATCAATCATGGCATCCACCCGGCTACTTCGTTTAAATCAATTGAATGAGAGTGACTCTTGGAGCTTATTTGTGCATCATGCTTTTTTGGGCAAGAATATATTTGAATATCCAAATCTCGAGTCGATCGGCAAGAAAATAGTAGAAAAGTGTGGGGGGTTGCCTTTAGCTCTAGAAACATTGGGGCAATTATTGCAAAACAAATTCTGTGAAACTGAATGGATTAAAATATTGGAGACTGATATGTGGCGTTTATCAGACGGGGACAACATTAACCCCATACTGAGATTGAATTACCTTAACCTCCCTTCCAATCTGAAGCGTTGTTTTGCTTATTGTTCTATATTTCCAAAGGGCTATGAGTTTGAGAAGCGTGGGTTAATCAAGCTTTGGATGGCAGAAGGCTTGCTAAAGTGTTGGGGAAGAGACAAAACTGAAGAACAGTTGGGTAATGAATTCTTCAATTATCTAGTGTCAATATCGTTTTTCCAACAATCAGTAACTATGCCTTTATGGGCTGGTAAATACTACTTCATCATGAACGATCTTGTCAATGATTTAGCAAAATCAGTGTCGGGAGAATTCTGCTTAAGAATAGAGGATGGTAATGTGCAAGAAATCCCTAAAAGGACGCGTCACATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAGATCATATTCATAAAATTAAGGGACTGCACAGTCTGATGGTAGAAGCGCAGGGTTGTGGTGACCAACGCTTTAAGATAAGCCCCAGTGTACAGAAAATTTTGTTTTCAAGACTAAAATATTTGCAGGTGTTGTCCCTCTCTGGTTGCAATCTCGTAGAGCTAGCCGATGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCTCACACTGAGATTGCAAGCTTACCCAATTCCATTTGTATGCTGTATAATTTGCAGACACTCTTGTTGGAACAATGTTTCAGATTGGCTGAGCTGCCTTCAGATTTTTGCAAACTCATCAATTTACGTCATCTTAATCTAAACGGCACTCATATTAAGAAGATGCCACCGAATATAAGTAGGTTAAAAAATATTGAGATGCTGACTGATTTTGTTGTGGGAGAGCAGCGTGGATTTGACATTAAACAGTTGGCGGAACTCAACCATCTTCAACGAAGGCTTCAAATTTCAGGGTTGAATAATGTCATCGATCCCGCTGATGCTGTGGCAGCAAATTTGGAAGATAAAGAACATTTAGAAGAATTAAGCGTATCATATGATGAATGGAGAGAAATGGATGGATCAGTAACTGAAGCACATGTCTCTGTCTTAGAGGCTCTCCAACCAAATAGAAACCTCATGAGGCTAACCATCAAAGACTACAGAGGCAGTAGCTTTCCAAATTGGCTTGGCGATTATCATTTACCCAATTTAGTTACTCTTGAATTGTTGGGATGTAAACTTTGTTCCCAGTTACCATCACTTGGGCAGTTCCACTCTCTCAAGAAGCTTTCCATTTCAGGCTGCGATGGAATAGAGATTATTGGTGCAGAGATTTGTGGCTATAATTCATCAAATGTTTCATTTAGATCTCTTGAAACTTTGCGATTTGAGCACATGTCAGAATGGAAGGAATGGTTATGTCTTGAATGTTTCCCTTTGCTTCGAGAGCTTTGTATAAAACATTGTCCGAAGTTGAAAAGTTCCCTGCCTCAACACCTTCCTTCTTTGCAAAAATTGGAGATTATTGATTGCCAAGAGTTGCAGGCTTCAATTCCCAAGGCTGATAATATCAGTGACCTAGAACTAAAGAGATGTGATGGCATTTTAATAAATGAATTGCCATCTAGCTTGAAAAGGGTCATCCTTTGTGGGTCTTGGGTCATTGAATCCACCCTAGAGAAAATTTTATTTAACAGCGCTTTTCTTGAAAAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATTTAGAATGGTCCTCTTCGGATATGTGTAGCTGTAATTCTCTTCGCAGTCTAACTATAACAGGTTGGCACTCTTCCTATTTGCCTTTTGCACTGCACTTGTTCACCAATCTTCATTTTCTCATGTTGTATGATAGTCCATGGCTAGAATTGTTTTCCGGGAGGCAGCTGCCCTCCAATCTATGCAGCCTCCGAGTAGAAAGATGTCCTAAATTGATGGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAAATCTCTAAAACAATTATGTGTTAGTGATGATTTTGAAATCTTGGAGTCCTTTCCGGAGGAGAGTCTGCTGCCATCAACTATTACATCTCTTGAGTTAAAAAATTGTTCCAACCTAAGAAGAATAAACTACAAGGGTCTTTTTGAACAGAAAACAGCATGGACAATATATTCAATATTAGATAGCAAGTATGAGTACTCTTTGTATGCACCTTTTAATTAA 3402 0.3921 MAGVVGGAFLSSVFQVIRERLASQDFRDYFHERLWKKLEITLDSINEVLDDADIKEYQHRNVKNWLDDLKHDVYELEQLFDVIATDARSKGKMRRYLSLFIKRGFEDRIEALIQNLEFLADQKDRLGLNKFTSGDCEIGVLKLLREFRAVSKSCNDIFVGKDGRVIPRILPTAPLMDKSAVYGREHEIEEMTEFLLSDSYSETFVPIISIVGVIGMGKTTIARLVYNDHKIHEQFELKAWVYVSESFDLVHLTQAILREFHSSETYSEDMEILQRQLQQRLAGKKYLLVLDNIWNENVECRKKLLLPFSNGSSGSKLIVRTPHNEVASIMASTRLLRLNQLNESDSWSLFVHHAFLGKNIFEYPNLESIGKKIVEKCGGLPLALETLGQLLQNKFCETEWIKILETDMWRLSDGDNINPILRLNYLNLPSNLKRCFAYCSIFPKGYEFEKRGLIKLWMAEGLLKCWGRDKTEEQLGNEFFNYLVSISFFQQSVTMPLWAGKYYFIMNDLVNDLAKSVSGEFCLRIEDGNVQEIPKRTRHIWCCLDLEDGDRKLDHIHKIKGLHSLMVEAQGCGDQRFKISPSVQKILFSRLKYLQVLSLSGCNLVELADEIRNLKLLRYLDLSHTEIASLPNSICMLYNLQTLLLEQCFRLAELPSDFCKLINLRHLNLNGTHIKKMPPNISRLKNIEMLTDFVVGEQRGFDIKQLAELNHLQRRLQISGLNNVIDPADAVAANLEDKEHLEELSVSYDEWREMDGSVTEAHVSVLEALQPNRNLMRLTIKDYRGSSFPNWLGDYHLPNLVTLELLGCKLCSQLPSLGQFHSLKKLSISGCDGIEIIGAEICGYNSSNVSFRSLETLRFEHMSEWKEWLCLECFPLLRELCIKHCPKLKSSLPQHLPSLQKLEIIDCQELQASIPKADNISDLELKRCDGILINELPSSLKRVILCGSWVIESTLEKILFNSAFLEKLEVEDFFGPNLEWSSSDMCSCNSLRSLTITGWHSSYLPFALHLFTNLHFLMLYDSPWLELFSGRQLPSNLCSLRVERCPKLMASREEWGLFQLKSLKQLCVSDDFEILESFPEESLLPSTITSLELKNCSNLRRINYKGLFEQKTAWTIYSILDSKYEYSLYAPFN* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0613 1133 PANTHER DISEASE RESISTANCE PROTEIN RP 21 1048 IPR044974 GO:0006952
Mtr3g0613 1133 SUPERFAMILY L domain-like 506 917 - -
Mtr3g0613 1133 ProSiteProfiles Leucine-rich repeat profile. 616 637 IPR001611 GO:0005515
Mtr3g0613 1133 Gene3D - 340 424 IPR042197 -
Mtr3g0613 1133 Pfam Rx N-terminal domain 9 90 IPR041118 -
Mtr3g0613 1133 Coils Coil 102 129 - -
Mtr3g0613 1133 Gene3D - 425 517 IPR036388 -
Mtr3g0613 1133 Gene3D Ribonuclease Inhibitor 552 943 IPR032675 -
Mtr3g0613 1133 SMART LRR_typ_2 614 637 IPR003591 -
Mtr3g0613 1133 SMART LRR_typ_2 591 613 IPR003591 -
Mtr3g0613 1133 SMART LRR_typ_2 661 684 IPR003591 -
Mtr3g0613 1133 PANTHER OS05G0414200 PROTEIN 21 1048 - -
Mtr3g0613 1133 Pfam NB-ARC domain 185 405 IPR002182 GO:0043531
Mtr3g0613 1133 Gene3D - 169 336 IPR027417 -
Mtr3g0613 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 439 IPR027417 -
Mtr3g0613 1133 Gene3D - 31 117 - -
Mtr3g0613 1133 PRINTS Disease resistance protein signature 207 222 - -
Mtr3g0613 1133 PRINTS Disease resistance protein signature 280 294 - -
Mtr3g0613 1133 PRINTS Disease resistance protein signature 377 391 - -
Mtr3g0613 1133 PRINTS Disease resistance protein signature 612 628 - -
Mtr3g0613 1133 SUPERFAMILY RNI-like 851 1103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0613 Mtr-Chr3 8240316 8243717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0613 590 696 WRKY Transcription Factor Family AT4G12020 36.364 1.08e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0613 - - mtr:MTR_3g021170 1483.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0613 3 8240316 8243717 Mtr3g0613 3 8240316 8243717 ECH