Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0592 ATGGTAAGAACAAGCGGAGGAGGAGGAGGAAGAGAAAGGTTTCTCCAACAAACCCTACTCCGTCGAATCGATTCATGCAAATCAAGATTCTCCACTGCTGATGATATCGTCGACCATCTCCGTTCAACTTACTCTAGTTATCACCGAATGAAGTTTCAAACTCTCCTTTTTTCGGTTCGAAAAGCTCTTCTTGCTTCCAACAACAATCAAGCTTCATATCATTCTCGAAGGAGACGAAGGAATGATGATTCTGACGATGATGATTCTGAAGATGATGATCATGATCATGAAAGATATAGTTCTCGAAAGAGACGTAGGAATGATGAATCTCAAAATGATGATTCTGAAAATGATCATGAAATAATGAGCACACAAACTTCGTCTGATTATTCTTATCGAAATAGGCATAGGATTGATGATTTTGGATCTGGTTCTGATGATGATCATGATCATGAAAGAATAAGAAATGCTTCTCGAAATAGACGTGCGATTGAGATTGATGAATATAATTCTGAAGATGATGATGCTGATGCTGATGATCTTGGAAGAATGAGATATGGAAGAATGGGCACTGGAGCTTCCTCTAATTATGATTCCGAGAACTACATCAAAAAAGTAGAGGAACCGGATGTTTTAAGGAAAAGTTCGATCCCTAATGCAGCCTCCGGTGTTGGCAGCAGTGGTGATGTTAAGAAAGGGCCGATGTTTAAGGATTTAGCAGGGAATAGGATGGAGAAGATAAAGAAGGAATTGGAAGTGCCTCTTAATTTACTGTGTTACCCTGAGTTGGGTAAAAAGTTAGGTTTGGAACCATTGACGGGAATTTTGCTGCACGGACCACCTGGTTGTGGGAAAACTAGACTTGCTCATGCTATTGCTAATGAAACTGAACTTCCTTTTTATCCTATTTCTGCTACTGATGTTGTTTCTGGTGTCACTGGTGGATCTGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCAAAGAGGACTGCTCCATCAATTATCTTTATTGATGAGATTGATGCAATTGCTTCGAAAAGAGAGAATTCACAGCGACAGACGGAGACACGAATTGTGACACAGTTATTAACTTGCATGGAAGAAGCTTGTAATTCAGTGAATTCTGATGAACCTACTGGTTATGTTCTTGTAATTGGAGCCACAAATAGGCTTGATGCTATTGACTCTGCTCTTAGAAGGCCTGGTCGTTTTGCTCGAGAGATTCTTGTTGGCATTCCTGATGAATCTGCGAGGGAAGAGATCCTTTTCGTGCATACTCGAAAGCGTAGTGACAAGTTTGACGCTTCGGTTGATCTGCAAAAGATAGCCAGAGCTACTTCGGGATTTGTTGGTGGTGATTTGGAAGCTCTGGTCGGAAAAGCTGGCGAGCTAGCATTGGAAAGGATAATTAATGAAAGGAATCGTAAATCATCTAAAGATCTTATGAGTGAACCTAATATAGTCAGGTGGAAGAAAACTTTGTCGCCTCAAGAAATAAATAAATTTGCAATCAAAATGTCCGATTTTGAGGAAGCAATCAAAATGGTACAACCTTCGTTAACAAGAGAAGGATTTTCTCCCATTCCTGATGTTAAATGGGAAGATGTTGGTGCGCTTGATGATGCAAGAGAAAATTTTGATTCCAACATTCTAATGCGTATAAAAGAACCCGAGATTTATGAGGGACTTGGGTTGGATCGAGACACGGGGTTTTTGCTTTACGGGCCTCCAGGATGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGAAGCCGGAGCTAATTTCATTTATATTAAGGGTCCTGAGCTTCTAAATAAATATGTTGGAGAAAGCGAGCGTGAAGTCCGGAAATTATTTGATCGTGCAAGGGCATGTGCACCTTGTATACTTTTTTTTGATGAGGTGGATGCTTTGACATCAAAACATGGTAATGAAGGTAGCAGGGTTATTGACGGAGTTTTGAAACAGTTGCTTATTGAGTTAGAAGGCGCTGAGCAACGCAAAGGTGTTTTCGTGATTGGTGCAACAGATCGGCCTTTGGAGATGGACAAAGCTGTCCTACGTCCGGGTAGATTTGGTAATCATATTTATATTTCTCTTCCAAGCCCAGACGGCCGTGTTTCGATCTTAAAAGCTCTTGCAAGGAGCAAGGAAGCTCTTGCAAGGCGTAAGGAAACTCATGCAAGGTTTAAGCTTATGCCTATTGATGCCAGTGTGGATTTGAGCGCCATTGGAAGATCGAAAGCCTGTGAAAACTATAGTGGTGCCGATCTTGCTGCATTGATGGACAAAGCAATATTGGCTGCTCTCGAAGAGAAGCTAGCCACAACTGCGAGAACAAGTGATACATTGACCGTCGAGCGTAAGCATTTTTACGTAGCATTGACTAAAGTCCATCCCTCTGTGTCAGAAAAGCAAATGAAGTACTATGATCGTGTTTCCAAGAAACTTAAAGGTGGTGATGTTGATCTACAGTGA 2481 0.4107 MVRTSGGGGGRERFLQQTLLRRIDSCKSRFSTADDIVDHLRSTYSSYHRMKFQTLLFSVRKALLASNNNQASYHSRRRRRNDDSDDDDSEDDDHDHERYSSRKRRRNDESQNDDSENDHEIMSTQTSSDYSYRNRHRIDDFGSGSDDDHDHERIRNASRNRRAIEIDEYNSEDDDADADDLGRMRYGRMGTGASSNYDSENYIKKVEEPDVLRKSSIPNAASGVGSSGDVKKGPMFKDLAGNRMEKIKKELEVPLNLLCYPELGKKLGLEPLTGILLHGPPGCGKTRLAHAIANETELPFYPISATDVVSGVTGGSEENIRELFSKAKRTAPSIIFIDEIDAIASKRENSQRQTETRIVTQLLTCMEEACNSVNSDEPTGYVLVIGATNRLDAIDSALRRPGRFAREILVGIPDESAREEILFVHTRKRSDKFDASVDLQKIARATSGFVGGDLEALVGKAGELALERIINERNRKSSKDLMSEPNIVRWKKTLSPQEINKFAIKMSDFEEAIKMVQPSLTREGFSPIPDVKWEDVGALDDARENFDSNILMRIKEPEIYEGLGLDRDTGFLLYGPPGCGKTLIAKAVANEAGANFIYIKGPELLNKYVGESEREVRKLFDRARACAPCILFFDEVDALTSKHGNEGSRVIDGVLKQLLIELEGAEQRKGVFVIGATDRPLEMDKAVLRPGRFGNHIYISLPSPDGRVSILKALARSKEALARRKETHARFKLMPIDASVDLSAIGRSKACENYSGADLAALMDKAILAALEEKLATTARTSDTLTVERKHFYVALTKVHPSVSEKQMKYYDRVSKKLKGGDVDLQ* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0592 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 817 IPR027417 -
Mtr3g0592 826 Pfam ATPase family associated with various cellular activities (AAA) 572 700 IPR003959 GO:0005524|GO:0016887
Mtr3g0592 826 Pfam ATPase family associated with various cellular activities (AAA) 275 410 IPR003959 GO:0005524|GO:0016887
Mtr3g0592 826 Gene3D - 529 811 IPR027417 -
Mtr3g0592 826 MobiDBLite consensus disorder prediction 214 233 - -
Mtr3g0592 826 Pfam AAA+ lid domain 436 474 IPR041569 -
Mtr3g0592 826 Pfam AAA+ lid domain 739 792 IPR041569 -
Mtr3g0592 826 ProSitePatterns AAA-protein family signature. 382 400 IPR003960 GO:0005524|GO:0016887
Mtr3g0592 826 MobiDBLite consensus disorder prediction 68 156 - -
Mtr3g0592 826 CDD AAA 269 411 - -
Mtr3g0592 826 Gene3D - 227 411 IPR027417 -
Mtr3g0592 826 Gene3D - 702 797 - -
Mtr3g0592 826 MobiDBLite consensus disorder prediction 132 156 - -
Mtr3g0592 826 PANTHER AAA-FAMILY ATPASE 22 817 - -
Mtr3g0592 826 CDD AAA 570 701 - -
Mtr3g0592 826 MobiDBLite consensus disorder prediction 94 120 - -
Mtr3g0592 826 Gene3D - 413 523 - -
Mtr3g0592 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 523 IPR027417 -
Mtr3g0592 826 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 22 817 - -
Mtr3g0592 826 SMART AAA_5 567 703 IPR003593 -
Mtr3g0592 826 SMART AAA_5 271 414 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0592 Mtr-Chr3 7822786 7828999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0592 491 819 Calmodulin-binding Proteins AT3G56690 36.858 1.06e-59 218