Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0585 ATGTACCCTCAACAACAACACCACCACCAACAATACCAAGCTCAACCCTACAATTTCCAGCAACAACAACATCAACCCTACTATTCATCATTTCCTGATCCTTCACTTCATCCTCCTGGCACTGACCCACTTGCAAATTCAACATCTTTTGCACCTCCTGTTTCCATTTACACCTCCCAACCTACAGATTATCAGAATTGGATCGTTCCACAATCTGAACCTATCAGATATGATCTTGCTGTTGGTTCATCACACGAGGCTTCAGCAGCACCTGCAAGTTTACCTTCTGTGTGGAATGGTACATGGCCACCACAAATTTATGGCAATGAGACTACAACAATGTTGCCTAACCAAACCAAAGTCACCATAGCTTTGAGATGTGAAGTGTGTAAAGTTGATGTCAATAGCAAAGACTCTTATGATAGTCACATAGCTGGAAAGAAACACAAGAAGAATTTGCAGATACAGACTAATCCTACTATTGCATCTCATGCGAATGTACAAACTGACACAAGTAGTATTCAAGGACAAGCGTTAATTGGTCCTGTAGCCAAGCAATCCGAGCCTAAGAAACAGGTTGATTCTGCAACGGTTTGCTCAACTTGCAATGTTTTGTGCACTAGTCAAGATGCATATATCAAACATCTTGCTGGGAGAAAGCACGCTGCTCAGGTTGCCTTGATGTCTAATAATGGCATTGGTCCATCTATTGCCGAATTCAAGCGTAACGGTGTTGGTCCATTTCAAAAAGCTGCTAAGAAAATCAAGGTTGCTCAATCTGTATGGTGTGAAGTTTGCAAGATTAATTGTAACAGCAGGGATATCTACATTACACACTTAGCCGGTAAGAAACACTTGAAGACCTTGGAGAAACAGTCAAATCCAAAAATCGATGTCGGCACTAGTGGCACTTCCACCGCCACCACCACCGCCATCGCACCAAATACCTTAATCGGGCCACAAGAAAAGCCAGGTACCGATCAGCCAAAACCAAAGAAGGCATCTGAACTTGATATTGAGACGAAGAAACGTAAAGTTGTAGAAGGAGGAGCTGCAGTTGATGGTATTAAAATGTGCACTTTATGCAATGTGGTGTGTAATAGCCAGACAGTTTTCAATTTTCACCTTGTTGGCCAGAAACATGCTGCTATGGTGAAGAAGGCAGGGTCGGTCACTGGTTGA 1182 0.4281 MYPQQQHHHQQYQAQPYNFQQQQHQPYYSSFPDPSLHPPGTDPLANSTSFAPPVSIYTSQPTDYQNWIVPQSEPIRYDLAVGSSHEASAAPASLPSVWNGTWPPQIYGNETTTMLPNQTKVTIALRCEVCKVDVNSKDSYDSHIAGKKHKKNLQIQTNPTIASHANVQTDTSSIQGQALIGPVAKQSEPKKQVDSATVCSTCNVLCTSQDAYIKHLAGRKHAAQVALMSNNGIGPSIAEFKRNGVGPFQKAAKKIKVAQSVWCEVCKINCNSRDIYITHLAGKKHLKTLEKQSNPKIDVGTSGTSTATTTAIAPNTLIGPQEKPGTDQPKPKKASELDIETKKRKVVEGGAAVDGIKMCTLCNVVCNSQTVFNFHLVGQKHAAMVKKAGSVTG* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0585 393 PANTHER ZINC FINGER RNA-BINDING PROTEIN 150 389 - -
Mtr3g0585 393 PANTHER ZINC FINGER RNA-BINDING PROTEIN 115 154 - -
Mtr3g0585 393 Gene3D Classic Zinc Finger 183 233 - -
Mtr3g0585 393 PANTHER SI:CH211-197H24.6 115 154 - -
Mtr3g0585 393 PANTHER SI:CH211-197H24.6 150 389 - -
Mtr3g0585 393 MobiDBLite consensus disorder prediction 23 49 - -
Mtr3g0585 393 SUPERFAMILY beta-beta-alpha zinc fingers 352 387 IPR036236 -
Mtr3g0585 393 SMART ZnF_U1_5 258 292 IPR003604 GO:0003676|GO:0008270
Mtr3g0585 393 SMART ZnF_U1_5 122 156 IPR003604 GO:0003676|GO:0008270
Mtr3g0585 393 SMART ZnF_U1_5 194 228 IPR003604 GO:0003676|GO:0008270
Mtr3g0585 393 SMART ZnF_U1_5 354 388 IPR003604 GO:0003676|GO:0008270
Mtr3g0585 393 Gene3D Classic Zinc Finger 248 293 - -
Mtr3g0585 393 Gene3D Classic Zinc Finger 110 156 - -
Mtr3g0585 393 Gene3D Classic Zinc Finger 336 388 - -
Mtr3g0585 393 SUPERFAMILY beta-beta-alpha zinc fingers 186 227 IPR036236 -
Mtr3g0585 393 SUPERFAMILY beta-beta-alpha zinc fingers 98 155 IPR036236 -
Mtr3g0585 393 MobiDBLite consensus disorder prediction 297 316 - -
Mtr3g0585 393 Pfam Zinc-finger of C2H2 type 359 381 - -
Mtr3g0585 393 Pfam Zinc-finger of C2H2 type 199 221 - -
Mtr3g0585 393 Pfam Zinc-finger of C2H2 type 126 149 - -
Mtr3g0585 393 Pfam Zinc-finger of C2H2 type 262 285 - -
Mtr3g0585 393 MobiDBLite consensus disorder prediction 297 338 - -
Mtr3g0585 393 SUPERFAMILY beta-beta-alpha zinc fingers 259 291 IPR036236 -
Mtr3g0585 393 SMART c2h2final6 357 381 IPR013087 -
Mtr3g0585 393 SMART c2h2final6 125 149 IPR013087 -
Mtr3g0585 393 SMART c2h2final6 197 221 IPR013087 -
Mtr3g0585 393 SMART c2h2final6 261 285 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0585 Mtr-Chr3 7743754 7749425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0585 194 391 C2H2 Transcription Factor Family AT5G61190 30.303 6.62e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0585 - - cam:101495339 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0585 3 7743754 7749425 Mtr3g0585 3 7743754 7749425 ECH