Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0578 ATGGCAGAGCTGATTGCTGGAGCATTTCTTTCGTCATTATTTCAAGTTACTCTTGAGAGCATTGCCTCAAGAGATTTCAAAGACCTCTTCAATCAAAAGTTGGTTGAAAATCTTGAAATCACACTGTATTCTATCAATCAATTGTTGGATGATGCAGAGACAAAGAAGTACCAAAACCAAAATGTGAAGAAGTGGTTTGATCGTCTAAAGCATGAGGTATACGAAGTAGATCAACTGTTAGACGAAATTGCTACAAATGCACAACAAAAGCGCAAAGTGAAACGCTTGCTTTCAACTTTGTCTAATCAATTTGAATCTAGGATCAAAGATTTGCTAGACAAGCTAAAATCTCTTGCAGCCCAAAAGGATGTGTTGGGATTGACACAAAGTAATGAAGGTGGAGTAAGCCTGCAATCCTCAAAAAGATCTCCAACTGCATCTTTGGTGGATGAATCTTGCATATATGGTAGAGAAGGTGACAAAGAAGAAATAATCAACTATTTGCTGTCAGACAAGGACAACAACAACCAGGTATCAATAATCAGCATAGTCGGTATGGGTGGGATGGGAAAAACCACCCTTGCTCAACTTGTCTACAACGACCAGAGGATGGAGAAGCATTTTGAACTTAAAGCTTGGGTCCATGTCTCAAAATCTTTTGATGTTGTTGGACTCACCAAAACAATTCTCAGGTCATTCCATTCTCCTGCAGACGGTGAAGACTTGGATCCACTCATTTGTCAATTACAAAAGACACTAACCGGAAAGAAATGTTTGCTTGTTCTAGATGATGTGTGGAATGGGAATGAGGAATGTTTGGAGCAATTACTACTTTCTTTTAACCCTGGATTTTCAGGGAGTAAGATTATTGTGACAACACGTGACAAACATGTTGCATTTGTCATGAAATCTGACCATCAACTTCTTTTAAATCAATTGGAGGAGAAAGATTGTTGGAGTATATTTGTGAAACACGCTTTTCGAGGAAAAAATGTGTTTGAATATCCAAATCTTGAATCGATTGGCAAGAAGATTGTAGAGAAATGTGGAGGGTTGCCTCTAGCTGTGAAAACATTAGGGAATCTCCTGCAAAGAAAATTTTCTCAAGCTGAATGGTTTAAGATATTGGAGACTGATATGTGGCATGTATCGAAGGGTGGTGATGAAATTAACTCAGTATTGAGATTGAGTTACCATAATCTCCCATCCAATCTAAAGCGTTGTTTTGCCTTTTGTTCAATATTTCCCAAGGGTTATGTATTTGAAAAGGATGAATTGATCAAGCTTTGGATGGCAGAAGGTTTGCTGAAATGTTGCGGAAGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATTCTTGGATGATCTAGAGTCCATTTCATTTTTTCAAGAACCACTATATTCATGGGGTGATAAAAGATTATTCATGCATGATCTTGTCAATGATTTGGCAAAATCAGAGTCCCATGAGTTTTGCTTACAAATTGAGGGTGATAGTCTGCAAGATATAACTGAAAGAACACGTCACATTTGCTGCCATCTTGATTTGAAAGATGGTGCGAGATTATTGAATCACATTTCTAAGATTAAGAAATTACGCAGCTTCTTGGTAGTATCACGAGGCTATGATGAAGAATGCTTCATAATAAGCAACAATTTGCAACATGATCTATTTTCAAAACTTAAATATTTGCGGTTGTTGTCATTCGGTGGTTGTAAACTCAAAGAGCTATCAGGTGAGATAGGAAATCTAAAGCTTTTGCGATATCTAAACCTGACTAAATCATTAATTGAAAGGTTGCCTGACTCAATTTGTAAGCTGTACAAATTAGAGACTCTGATACTGGAACGCTGTTCTGAATTGACTATACTCCCTTCAAAATTTTACAAACTTGTGAGTTTACGCCATCTTAATCTCAAAGGATGTAATATAAAGAAAATGCCAAAGCAGATGGGGAGTCTAAACCATCTTCAAACACTGAGTCATTTTGTTGTGGGAGAGGAGAATGGGTCTAATATTCAGGAGTTGGGTAATCTCAATCGTCTTCAAGGGAAACTTTGTATTTCAGGGTTGGAGTATGTCATCAATCCCGAAGATGCAGCAAGAGCAAATTTGAAAGATAAGAAACATGTAGAAGAATTAAACATGAAGTACAGTGACAATTTCAAATTCAACATCAATAGAAGAGAATCAGATGTCATTGAGGCTCTACAACCAAATAGCAACTTGAAGAGGCTCACTATTGAAGGCTACAATGGCAGAAGCTTTCCAAATTGGATAACGGGTTGTCATTTACCCAACTTGGTATCTCTTCAACTGTTAAGCTGTGGATTATGTTCCCATTTGCCACCACTTGGGCAGCTTCCTTCTCTCAAGGAGCTTTCTATTTCAAAATGTGACGGAATAAAGATCATTGGTGAAGAGTTTCATGGCAACAACAATTTAACAAATGTTCCGTTCTTGTCCCTTGAAGTTTTGAAATTTGAGATGATGAACAATTGGGAGGAATGGTTGTGTCTTGAAGGGTTTCCTTTGCTTAAAAAGCTTTCTATAAGAAATTGTCCCAAATTGAAAAGGGCTCTGCCTCAACACCTTCCTTATTTACAAAAACTGAATATTAGTGATTGCAACAAGATGGAGGCATCCATTCCCAAGTGTGATAATATGATAGAGTTAGATATACAGAGATGTGATAGAATTTTGGTAAATGAATTGCCGACAAGTTTGAAATGGTTATTCCTTTGTGATAATCCGTACACTGAGTTCTCCGTGGACCAAAATCTAATCAATATTCTCTTTCTTGAAGAGTTGAAGTTGGATTTCAGAGGCTGTGTAAACTGTCCCTCTTTGGATTTACGTTGCTATAATTCTCTTTGCTATCTTTCAATAACAGGATGGGGCTCCTCCTCATTACCTTTTTCACTACATTTGTTCACCAAACTTCATTCTCTGTATCTGCACAATTGTCCAGAGCTGGAATCGTTTCCAATGGGTGGTTTGCCTTCCAACTTGAGGCACCTTAAAATATGCAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCCTTGGATTCATTCTTTGTCAGTGATGAGTTTGAAAACGTGGAGTCGTTCCCAGAGGAGAATCTGCTGCCACCAAGTCTTACTGATCTTAATGTGATAAATTGTTCAAAGCTAAGAATAATGAACAAAAAGGGTTTTCTCCACCTCAAATCTCTTAATTGGCTATATATTAACAACTGTCCTAGTCTTGAGAGCTTGCCAGAGAAGGAGGATCTACCCAACTCCCTCTCTAATTTGTGGATTGAAGATTGTGGAATAATAAAGGAGAAGTATGAAAAGGAGGGAGGAGAGCGTTGGCATACAATCACTCACATCCCGAATGTGTGGATTGACAACATTAAACAGAAATGA 3435 0.379 MAELIAGAFLSSLFQVTLESIASRDFKDLFNQKLVENLEITLYSINQLLDDAETKKYQNQNVKKWFDRLKHEVYEVDQLLDEIATNAQQKRKVKRLLSTLSNQFESRIKDLLDKLKSLAAQKDVLGLTQSNEGGVSLQSSKRSPTASLVDESCIYGREGDKEEIINYLLSDKDNNNQVSIISIVGMGGMGKTTLAQLVYNDQRMEKHFELKAWVHVSKSFDVVGLTKTILRSFHSPADGEDLDPLICQLQKTLTGKKCLLVLDDVWNGNEECLEQLLLSFNPGFSGSKIIVTTRDKHVAFVMKSDHQLLLNQLEEKDCWSIFVKHAFRGKNVFEYPNLESIGKKIVEKCGGLPLAVKTLGNLLQRKFSQAEWFKILETDMWHVSKGGDEINSVLRLSYHNLPSNLKRCFAFCSIFPKGYVFEKDELIKLWMAEGLLKCCGRDKSEEELGNEFLDDLESISFFQEPLYSWGDKRLFMHDLVNDLAKSESHEFCLQIEGDSLQDITERTRHICCHLDLKDGARLLNHISKIKKLRSFLVVSRGYDEECFIISNNLQHDLFSKLKYLRLLSFGGCKLKELSGEIGNLKLLRYLNLTKSLIERLPDSICKLYKLETLILERCSELTILPSKFYKLVSLRHLNLKGCNIKKMPKQMGSLNHLQTLSHFVVGEENGSNIQELGNLNRLQGKLCISGLEYVINPEDAARANLKDKKHVEELNMKYSDNFKFNINRRESDVIEALQPNSNLKRLTIEGYNGRSFPNWITGCHLPNLVSLQLLSCGLCSHLPPLGQLPSLKELSISKCDGIKIIGEEFHGNNNLTNVPFLSLEVLKFEMMNNWEEWLCLEGFPLLKKLSIRNCPKLKRALPQHLPYLQKLNISDCNKMEASIPKCDNMIELDIQRCDRILVNELPTSLKWLFLCDNPYTEFSVDQNLINILFLEELKLDFRGCVNCPSLDLRCYNSLCYLSITGWGSSSLPFSLHLFTKLHSLYLHNCPELESFPMGGLPSNLRHLKICNCPKLIGSREEWGLFQLNSLDSFFVSDEFENVESFPEENLLPPSLTDLNVINCSKLRIMNKKGFLHLKSLNWLYINNCPSLESLPEKEDLPNSLSNLWIEDCGIIKEKYEKEGGERWHTITHIPNVWIDNIKQK* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0578 1144 PANTHER DISEASE RESISTANCE PROTEIN RP 19 1016 IPR044974 GO:0006952
Mtr3g0578 1144 Pfam NB-ARC domain 158 399 IPR002182 GO:0043531
Mtr3g0578 1144 Gene3D - 398 488 IPR036388 -
Mtr3g0578 1144 Gene3D Ribonuclease Inhibitor 520 923 IPR032675 -
Mtr3g0578 1144 Pfam Rx N-terminal domain 9 93 IPR041118 -
Mtr3g0578 1144 SUPERFAMILY L domain-like 471 920 - -
Mtr3g0578 1144 Gene3D Ribonuclease Inhibitor 935 1142 IPR032675 -
Mtr3g0578 1144 CDD AAA 155 293 - -
Mtr3g0578 1144 Coils Coil 35 55 - -
Mtr3g0578 1144 PANTHER OS05G0414200 PROTEIN 19 1016 - -
Mtr3g0578 1144 Gene3D - 18 124 - -
Mtr3g0578 1144 SUPERFAMILY RNI-like 815 1113 - -
Mtr3g0578 1144 Gene3D - 312 397 IPR042197 -
Mtr3g0578 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 412 IPR027417 -
Mtr3g0578 1144 Gene3D - 137 309 IPR027417 -
Mtr3g0578 1144 PRINTS Disease resistance protein signature 180 195 - -
Mtr3g0578 1144 PRINTS Disease resistance protein signature 252 266 - -
Mtr3g0578 1144 PRINTS Disease resistance protein signature 349 363 - -
Mtr3g0578 1144 PRINTS Disease resistance protein signature 863 879 - -
Mtr3g0578 1144 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0578 Mtr-Chr3 7651271 7696292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0578 154 649 WRKY Transcription Factor Family AT5G45050 23.285 1.59e-09 60.5