Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0538 ATGGAATCGATGTCATCTTCATCATCATCCTTCAATTTGATTTCTCAACAATGGATCTACGACGTGTTCATAAATTTCAGAGGGGAAGACACGCGAAAGAGCCTGGTTTCTCATCTATATGCTGCTCTCTCAAACGCGGGAATCAACACTTTTCTTGATGATGAAAAGCTTAAAAAGGGATGGGAAGTAGAACCAGAACTATTGCGAGCTATACAAGGGTCTCAAATATGTTTAGTTATTTTCTCAGAACACTACACAGAATCTAGTTGGTGTCTTGTTGAACTCGTGAAAATCATGGAACACCGCAAAACTAATAATAACAGTCCAGTGGTTATCCCCATATTTTACCATGTTGACCCTTCTGTTGTTCGTCGCCAGGTGGGTGATTTTGGAAAAGCTTTAGAAGCTATTACCAAAAGAATTCACCCACCAAAAGAGAGGCAAGAACTTTTGCGGACATGGAAGCGTGCTCTTACCCAAGCTGCAAATATTTCCGGATGGGATTCCAGCATTTTCAGGAGTGAAAGTGAACTAGTGAATAAAATTGTTGATGAAGTTTTGAGAAAGCTGGAAAACACATTCTTGCCTACAACAGAATTCCCAGTTGGACTAGAGTCCCGTGTGGACCAAGTGATGTTGTCGATTGAAAATCAATCAAGCAAAGTGTCTGCGGTAGGGATTTGGGGAATGGGCGGGTTGGGTAAAACTACCACAGCCAAAGGCATCTACAATAAAATTCATCGCAAATTTGTGCATAGAAGTTTCATTGAGAATATTAGACAAACATGCGAATCAGATAAAGGGTATATTCGTTTGCAACAACAACTTCTGTCAGATCTCTTCAAAACAAAGGAGAAGATACACAACATTGCATCAGGGACAATTACAATCAACAAAAGGCTCTCTGCAAAAAAGGTGCTCATTGTACTTGATGATGTGACCAAAGTTCAGCAGGTAAAAGCACTATGTGGAAATTATAAATGTTTAGGTTTGGGAAGTGTACTAATTGTTACAACCAGAGATGCACACGTGCTTAGGTCACTTGAAGTTGACTGTGTCTGTACAGCGAAAGAAATGGATGAAAATGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGAAACGCAACTCCAAGAGCAAACTTCAGTGATCTCTCAAAAAATGTAGTTAATTACTGTGGAGGATTACCCTTGGCTGTTGAAGTCCTCGGATCTTACTTATTTGAAAGGACAAAAGAAGAATGGAAAAGTGTGCTATCAAAGTTAGAAAAAATTCCCCATGAAGAAGTGCAAGAGAAATTGAAAATAAGCTATGATGGTTTGACAGATGACACAAAGAAGGCTATATTTCTTGATGTATGTTGTTTCTTTATCGGCAAGGACAGAGACTATGTTACCGAGATACTAAACGGTTGTGGACTTTTTGCTGGTATAGGAATAGCTGTCCTCATAGAGAGGAGCCTTTTAAAAGTTGAAAAGAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGTGGAAGTTCAACAAACGATCCAGGGGAGCGTAGTCGGTTGTGGCTTCACGAGGATGCACATAGTGTTTTGACAAAGAATACGGGAACACAAAAAGTTGAGGGATTGATTTTGAACTTGCAAAGTAAAGGCAGAGATAGCTTCAGTACCAATGTTTTCCAACAGATGCAGAACATGAGACTTTTGCAACTTGATTGTGTTGACCTCACCGGAGAATTTGCACATCTTTCCAAACAGCTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTGTATACCGAAAGACTTTTATCAAGGAAATCTAGTTGTTTTAGAATTAAAATTTAGCAATGTTAAACAAGTTTGGAAGGAAACCAAGTTGTTGGACAAGCTAAAAATACTCAATCTCAGTCATTCCAAGTACTTGAAAAGTACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCCGAGATACACCCGTCCATTGGAGTTCTCAAGAAGCTTCTTCTGATAAATTTGAAGGACTGTACAAGTCTTGGCAATCTACCAAGGGAGATCTATCAGCTGATATCTGTGAAAACTCTCATTCTTTTTGGTTGTTCAAAGATTGACAAATTGGAGGAAGATATAGTGCAAATGAAATCCTTGACAACTCTAGTTGCAGCAAATACTGGCGTCAAACAAGCACCCTTTTCCATTGTTAGATCAAAAAGCATTGTGTATATATCCCTATGCGGATATGAAGGATTATCACGTGATATTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAATGAATCCCTTGCCATATATTCCCCTCACATCCTTGGATGTAGAGAGTAATAATTTGGTTTTGGGTTATCAATCATCAATGCGCAGTAGTTGTTCAGAACATAGAAGCGTTAGGGTAGAATGCCAATCAGTGATTCAACTAATTCAAAAATTAACAAGTTTTCTTGATGGTCTATATGGTGCAAATCTTACTGAATCGGAAACATCACATGCATCAAAAATCTCGGATATTTCCTTGAAATCTCTTTTGATTACAATGGGAAGTTGCCACATAGTCGTCGATACTCTTGGCAAGAGCTTATCACAGGGATTGACAACCAATGATTCTAGTGATTCTTTCCTTCCGGGCGACAATTATCCTTCTTGGTTAGCCTATACAAATGAAGGACCTTCAGTACGGTTTGAAGTGCCCGAGGATTGTGATGGTTGCTTGAAGGGAATAACTTTATATGTTGTTTATTCATCGACACCTGAAAACATGGAAACTGAATGTCTCACTGGTGTTTTGATCATTAATTACACAAAATGCACGTTTCATATATACAAGCGAGACACAGTAATGTCCTTTAACGATGAAGATTGGCAGAGTGTAATATCAAATTTAGCAGTTGGGGACAGTGTGGGGATTTTTGTAGCTTTTGGGCATGGATTGACTGTTAAGAAGACAGTTGTCTATCTAACATATGCCGAGTCAAGTGCTATGCAAATTGAGCCATCAATTACTGTGGAAGTTAAACCATCTAGTGAAGTGCAAATGGAGCCATTACCTGAACCGGAAATGCAACCATCATCTAATGTGAAAACGGAGCCATCACTAGAAGAAGTGCAGCCATCGGCTGATATGAAGATGGAACCATTACCTGAACTGGAAGTGAAACCATCGTCTAATGTGAAAAGGGAGGCATCACCTGATGTGAAGATGGAGCCATTACCTGAACTGGAAGTGCAACCATCATCTAATGTGAAAAGGGAGTCATTACTTGAAGATGAAGTGCAACCATCACTTGATGTGAAGATGGAACCATCACCTATCATCAACAATGGGCCATTACCTAAGAGAAATACAAAAATATTTGTAAGATTTTCAAAGAAATTGGGAGAATGTTTATGCTTGAATCGGAATAGAGATCTCAATAATTTTTAA 3486 0.389 MESMSSSSSSFNLISQQWIYDVFINFRGEDTRKSLVSHLYAALSNAGINTFLDDEKLKKGWEVEPELLRAIQGSQICLVIFSEHYTESSWCLVELVKIMEHRKTNNNSPVVIPIFYHVDPSVVRRQVGDFGKALEAITKRIHPPKERQELLRTWKRALTQAANISGWDSSIFRSESELVNKIVDEVLRKLENTFLPTTEFPVGLESRVDQVMLSIENQSSKVSAVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFIENIRQTCESDKGYIRLQQQLLSDLFKTKEKIHNIASGTITINKRLSAKKVLIVLDDVTKVQQVKALCGNYKCLGLGSVLIVTTRDAHVLRSLEVDCVCTAKEMDENESLELFSWHAFRNATPRANFSDLSKNVVNYCGGLPLAVEVLGSYLFERTKEEWKSVLSKLEKIPHEEVQEKLKISYDGLTDDTKKAIFLDVCCFFIGKDRDYVTEILNGCGLFAGIGIAVLIERSLLKVEKNNKLGMHDLIRDMGREIVRGSSTNDPGERSRLWLHEDAHSVLTKNTGTQKVEGLILNLQSKGRDSFSTNVFQQMQNMRLLQLDCVDLTGEFAHLSKQLRWVNWQRSTFNCIPKDFYQGNLVVLELKFSNVKQVWKETKLLDKLKILNLSHSKYLKSTPDFSKLPNLEKLIMKDCPSLSEIHPSIGVLKKLLLINLKDCTSLGNLPREIYQLISVKTLILFGCSKIDKLEEDIVQMKSLTTLVAANTGVKQAPFSIVRSKSIVYISLCGYEGLSRDIFPSLIWSWMSPTMNPLPYIPLTSLDVESNNLVLGYQSSMRSSCSEHRSVRVECQSVIQLIQKLTSFLDGLYGANLTESETSHASKISDISLKSLLITMGSCHIVVDTLGKSLSQGLTTNDSSDSFLPGDNYPSWLAYTNEGPSVRFEVPEDCDGCLKGITLYVVYSSTPENMETECLTGVLIINYTKCTFHIYKRDTVMSFNDEDWQSVISNLAVGDSVGIFVAFGHGLTVKKTVVYLTYAESSAMQIEPSITVEVKPSSEVQMEPLPEPEMQPSSNVKTEPSLEEVQPSADMKMEPLPELEVKPSSNVKREASPDVKMEPLPELEVQPSSNVKRESLLEDEVQPSLDVKMEPSPIINNGPLPKRNTKIFVRFSKKLGECLCLNRNRDLNNF* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0538 1161 ProSiteProfiles TIR domain profile. 18 190 IPR000157 GO:0007165
Mtr3g0538 1161 Pfam TIR domain 20 194 IPR000157 GO:0007165
Mtr3g0538 1161 Gene3D - 193 353 IPR027417 -
Mtr3g0538 1161 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 23 1010 - -
Mtr3g0538 1161 Gene3D - 14 192 IPR035897 -
Mtr3g0538 1161 SMART till_3 19 164 IPR000157 GO:0007165
Mtr3g0538 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 451 IPR027417 -
Mtr3g0538 1161 Gene3D - 358 442 IPR042197 -
Mtr3g0538 1161 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 167 IPR035897 -
Mtr3g0538 1161 MobiDBLite consensus disorder prediction 1034 1086 - -
Mtr3g0538 1161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 1010 IPR044974 GO:0006952
Mtr3g0538 1161 SUPERFAMILY L domain-like 499 801 - -
Mtr3g0538 1161 Gene3D Ribonuclease Inhibitor 538 872 IPR032675 -
Mtr3g0538 1161 Pfam NB-ARC domain 206 438 IPR002182 GO:0043531
Mtr3g0538 1161 PRINTS Disease resistance protein signature 224 239 - -
Mtr3g0538 1161 PRINTS Disease resistance protein signature 300 314 - -
Mtr3g0538 1161 PRINTS Disease resistance protein signature 393 407 - -
Mtr3g0538 1161 PRINTS Disease resistance protein signature 631 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0538 Mtr-Chr3 7158277 7164919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0538 20 748 WRKY Transcription Factor Family AT4G12020 30.267 1.05e-80 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0538 - - mtr:MTR_8g011850 1251.11