Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0537 ATGTCAGAGGTTGTTGGTGGGACATTTCTTTCGTCTGTCTTTCGAGTGATTTTTGAGAGGTTAGCTTCAACAGATTTCAGAGATTACGTCCATGTAGATGTGGAGAAAAAACTTGAAATCACACTGGTTTCTATCAATAAAGTGCTGGATGACGCAGAGGCAAAGCAGTACCGTAACAAGAACGTGAGGAATTGGCTTAATGATCTCAAACTTGAGGTAGAGGAAGTAGAGAAAATATTGGATATGATTGCTACTGATGTACAACGAAAGAAGATATTTGAATCTAGGATTAAAGTATTGCTGAAGAGGCTAAAGTTTATTGCAGATCAAATAAGTTATTTAGGACTTGAAGATGCAACTCGTGCTAGTAATGAAGATGGAGCCACTTCCCGAATATTACCTACTATATCTTTGGTCTATGAATCTTTCATATATGATAGAGAGCTTGAGAAATACGAAATAATCGACTATTTACTTTCCGACAGTGACAGTCGCAACCAAGTACCCATAATCAGTGTAGTGGGTGTGATTGGGATGGGTAAGACAACCCTCGCCCAGCTTGTTTACTATGACGACATGATCGTGGAGCATTTTGAAATTAAAGCTTGGGTCCATGTTTCGGAATCTTTTGATCTTGTTCGTCTGACCCAATCAATTCTTAGGTCAATTCATTCTTCGGCGGCAGATAGTGAAGACTTGGAAATACTCCAACATCAGTTGCAACAGAGGTTAATGGGCAAGCAATATTTGCTCGTTTTAGATGATGTCAGGAACAAAAATAGGAATATGTGGGAGCATTTCCTACTTCCTTTTAGCCGTGAATCTTCAGTAGGTAAGATGATTGTGACAACACATGATATGGAAGTAGCATCAATCATAAGATCTACGCAACTACTTCATTTAAAACAATTGAAGGAGAGTGATTGTTGGAGTTTATTTGTGAAACATGCCTTTCTAGGAAGAAAAGTATTTGAATATCCAAATCTGGAATTGATAGGCAAACAAATAGTACAAAAGTGTGAAGGGTTGCCTTTAGCTCTGAAAACATTGGGGAATCTCTTGGAAAGAAAGTTCTCTGAACCTGATTGGGTTAAGATGTTGGAGACTGATTTCTGGCGTTTACCAGAGGGTAATAACAACATTAACCCTTTATTGAAATTGAGTTACCTTAACCTCCCTTCCAATCTGAAGCATTGTTTTGATTATTGTTCTTTATTTCCAAAGGGCTATGAGTTTGAGAAGGGTGAAGTAATCAAGCTTTGGATGGCAGAAGGTTTGCTGAAGTGTTGCGGAAGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATTCTTCAACGATCTAGTGTCAATAACATTTTTCCAGCAATCAACAATTATGCCATTATGGGCTGGTAAATACTACTTCATCATGCATGATCTTGTATATGATTTAGCGAAATTAGTGTCAGGAGAATTTCGCTTAAGAATAGAGGGTGATAACCTGCAAGATATCCCTGAAAGGACGCGCCAGATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAGAGCATATTCTTAAAATTAAGGGACTACACAGTCTGATGGTAGAAGCACAAGGCTATGGCAACCAACGTTTTAGGATAAGCACCAATGTGCAGCATAATTTGTTTTCAAGAGTAAAATATTTGCGGGTGTTGTCTTTCTCTGGTTGCAATCTCATAGAGCTAGCTGATGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCTTACACCGAGATTGCAAGCTTACCTGATTCCATTTGTATGCTGTATAATTTGCAGACACTCTTACTGCAAGGTTGTTTTAAACTGACTGAGCTCCCTTCAGATTTTTGCAAACTCGTCAATCTACGTCATCTTAATCTGCAAGGCACTCATATAATGAAGATGCCAATGAAGATAGGAGGGTTAAACAATCTTGAGATGCTGACTGATTTTGTTGTGGGAGAGCAGCGTGAATTTGATATTAAGCAGTTGGGGAAACTCAACCAACTTCAAGGAAGGCTTCAAATTTCAGGGTTGGAAAACGTCAAAGATCCTGCATATGCTGTAGCAGCATATTTGAAAGACAAAGAACAGTTAGAAGAATTAAGTCTGTCATACGATGATTGGATAAAAATGGATGGATCAGTAACTAAAGCACGTGTCTCTGTCTTAGAGGCTCTTCAACCAAATATAAACCTCATGAGGCTAACCATCAAAGACTACAGAGGCAGTAGATTTCCAAATTGGCTTGGGGTTCATCATTTACCCAATTTAGTATCTCTAGAATTGTTGGGATGTAAACTTCGTTCCCAGTTGCCCCCACTTGGGCAGTTACCCTCTCTCAAGAAGCTTTCCATTTCAGGCTGTGATGGAATAGATATCATTGGTACAGAGATTTGTGGCTACAATTCATCAAATGATCCATTTAGATCCCTTGAAACTTTGCGATTTGAGCACATGTCTGAATGGAAGGAATGGTTATGTCTTGAATGTTTTCATTTGCTTCAAGAGCTTTGTATCAAACATTGTCCGAAGTTGAAAAGTTCCCTGCCTCAACACCTTCCTTCTTTGCAAAAGTTGAAAATTATTGATTGCCAAGAGTTGCAGGCTTCAATTCCCAAGGCTGATAATATCAGTGAGCTAGAACTAAAGAGATGTGATGGCATTTTGATAAATGAATTGCCATCCAGCTTGAAAAAGGCCATCCTTTGTGGAACTCAGGTCATTGAATCCGCCCTAGAGAAAATTCTATTTAGCAGTGCCTTTCTTGAAGTGTTAGAAGTTGAAGACTTCTTTGGTCAAAATCTAGAATGGTCCTCTTTGGATATGTGTAGCTGTAATTCACTTTGCACTCTAACTATAACAGGTTGGCACTCTTCCTCCTTGCCATTTGCACTGCACTTGTTCACCAATCTTCATTCTCTGGTGTTGTACGATAGTCCATGGCTGGAATCGTTTTGCTGGAGGCAGTTGCCTTGCAACCTATGCAGCCTCCGAATAGAAAGATGTCCTAAATTGATGGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTCTGAAACAGTTCAGTGTAAGTGATGATTTTGAAATCTTGGAGTCCTTTCCGGAGAAGAGTCTGCTGCCATCAACTATGAAATCTCTTGAGTTAACAAATTGTTCCAACCTAAGAATAATAAACTATAAGGGTCTTCTCCACCTCACTTCACTTGAATCTCTATATATTGAAGACTGCCCTTTCCTTGAGAGCTTGCCGGAGGAGTGTCTACCCAGCTCCCTTTCTACTTTGTCCATTCATGATTGCCCATTAATTAAGCAGAAGTACCAAAAGGAGGAAGGAGAGTGTTGGCATACAATTAGTCACATTCCTGATGTGACAATTTCCTGA 3408 0.3938 MSEVVGGTFLSSVFRVIFERLASTDFRDYVHVDVEKKLEITLVSINKVLDDAEAKQYRNKNVRNWLNDLKLEVEEVEKILDMIATDVQRKKIFESRIKVLLKRLKFIADQISYLGLEDATRASNEDGATSRILPTISLVYESFIYDRELEKYEIIDYLLSDSDSRNQVPIISVVGVIGMGKTTLAQLVYYDDMIVEHFEIKAWVHVSESFDLVRLTQSILRSIHSSAADSEDLEILQHQLQQRLMGKQYLLVLDDVRNKNRNMWEHFLLPFSRESSVGKMIVTTHDMEVASIIRSTQLLHLKQLKESDCWSLFVKHAFLGRKVFEYPNLELIGKQIVQKCEGLPLALKTLGNLLERKFSEPDWVKMLETDFWRLPEGNNNINPLLKLSYLNLPSNLKHCFDYCSLFPKGYEFEKGEVIKLWMAEGLLKCCGRDKSEEELGNEFFNDLVSITFFQQSTIMPLWAGKYYFIMHDLVYDLAKLVSGEFRLRIEGDNLQDIPERTRQIWCCLDLEDGDRKLEHILKIKGLHSLMVEAQGYGNQRFRISTNVQHNLFSRVKYLRVLSFSGCNLIELADEIRNLKLLRYLDLSYTEIASLPDSICMLYNLQTLLLQGCFKLTELPSDFCKLVNLRHLNLQGTHIMKMPMKIGGLNNLEMLTDFVVGEQREFDIKQLGKLNQLQGRLQISGLENVKDPAYAVAAYLKDKEQLEELSLSYDDWIKMDGSVTKARVSVLEALQPNINLMRLTIKDYRGSRFPNWLGVHHLPNLVSLELLGCKLRSQLPPLGQLPSLKKLSISGCDGIDIIGTEICGYNSSNDPFRSLETLRFEHMSEWKEWLCLECFHLLQELCIKHCPKLKSSLPQHLPSLQKLKIIDCQELQASIPKADNISELELKRCDGILINELPSSLKKAILCGTQVIESALEKILFSSAFLEVLEVEDFFGQNLEWSSLDMCSCNSLCTLTITGWHSSSLPFALHLFTNLHSLVLYDSPWLESFCWRQLPCNLCSLRIERCPKLMASREEWGLFQLNSLKQFSVSDDFEILESFPEKSLLPSTMKSLELTNCSNLRIINYKGLLHLTSLESLYIEDCPFLESLPEECLPSSLSTLSIHDCPLIKQKYQKEEGECWHTISHIPDVTIS* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0537 1135 Gene3D - 129 299 IPR027417 -
Mtr3g0537 1135 SUPERFAMILY L domain-like 470 888 - -
Mtr3g0537 1135 Gene3D Ribonuclease Inhibitor 519 906 IPR032675 -
Mtr3g0537 1135 Gene3D - 26 112 - -
Mtr3g0537 1135 Pfam NB-ARC domain 153 368 IPR002182 GO:0043531
Mtr3g0537 1135 Pfam Rx N-terminal domain 9 96 IPR041118 -
Mtr3g0537 1135 PANTHER OS05G0414200 PROTEIN 22 859 - -
Mtr3g0537 1135 Gene3D - 389 480 IPR036388 -
Mtr3g0537 1135 SUPERFAMILY RNI-like 815 1109 - -
Mtr3g0537 1135 Coils Coil 66 86 - -
Mtr3g0537 1135 PRINTS Disease resistance protein signature 170 185 - -
Mtr3g0537 1135 PRINTS Disease resistance protein signature 243 257 - -
Mtr3g0537 1135 PRINTS Disease resistance protein signature 340 354 - -
Mtr3g0537 1135 PRINTS Disease resistance protein signature 782 798 - -
Mtr3g0537 1135 Gene3D - 303 388 IPR042197 -
Mtr3g0537 1135 Gene3D Ribonuclease Inhibitor 909 1114 IPR032675 -
Mtr3g0537 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 403 IPR027417 -
Mtr3g0537 1135 PANTHER DISEASE RESISTANCE PROTEIN RP 22 859 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0537 Mtr-Chr3 7152152 7157036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0537 149 795 WRKY Transcription Factor Family AT5G45050 23.120 3.61e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0537 - - mtr:MTR_3g021170 1532.31