Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0532 ATGGATTCAGGTTCGCCATATCACTGGCTGAGGGAATTGAGATATGACTCTCATGGCTCAAATCCAATGATCCCTCTTATTGAGTGTGCAAAATGTGTTGCATCTGGAAGCATAAAAACTGCTGATATTGGACTTGAGTATATTTCTCAGATTTCATCACCTCATGGTAATGGTGTACAAAGAATGGTCACTTATTTCAGTGAAGCACTTGGATACAAGATAGTTAAACATTTACCTGGCGTATACAAAGCTCTCAATTCCTCGAAAATATCATTGTCTTCAGACGACATCCTTGTTCAAAAATACTTCTATGATCTGTGTCCTTTTTTGAAGTTTTCATACCTGATCACAAATCAAGCAATTATCGAATCGATGGAACGTGAAAAGGTGGTGCATATTATTGATCTCCATTGTTCCGAGCCAGCACAATGGATAAATCTTATACAAACTTTAAAGAAACGTCCGGGAGGTCCGCCCTTTCTGAAAATTACAGGAATTAATGAAAAGAAAGAGGCATTGGAGCAAATGAGCTTTCATTTGACAACCGAAGCAGGGATTTTGGATTTTCCTTTACAGTTCAATCCAATAATTAGCAAACTTGAAGATGTCGATTTTGAAAACTTGCCTGTCAAGACAGGAGATGCTGTTGCAATTTCTTCTGTTCTTCAGCTGCATTCTCTCCTTGCTACTGATGATGAAATGGTCTCCTCATCAGGTGCAGCATCTTTCAATATGCAGAGAGCAGCGCACTTGGGTCAGAGGACTTTTGCAGAGTGGCTAGAGAGAGACATGATCAATGCATATATCTTGAGTCCGGATTCAGCATTATCACCTCTTTTTTTAGGTGCTTCACCTAAGATGGGGATCTTTCTTAACGCTATGCGAAAACTACAACCAAAACTTTTAGTGATTACTGAACAGGAATCAAATCTGAATGGATGTAATTTAACGGAGAGAATCGACCGAGCATTGTACTTTTACGGTTCACTTTTTGACTGCTTGGAATCTACTGTTACAAGAACATCAGTCGAGAGACAAAAACTCGAGAGCATGCTTCTTGGAGAGCAAATAAAGAACATCATTACTTGTGAGGGAGTCGATAGAAAGGAAAGGCATGAGAAGCTCGAGCAATGGATTCAAAGACTTAAAATGGCTGGATTTGTGAAGGTACCTTTGAGTTACAATGGGAGGATAGAAGCGACAAATCTATTGCAGCGATATAGTCATAAATACAAGTTTAAAGAAGAAAATGATTGTTTACTTGTTTGTTGGAGTGACAGACCACTTTTTTCTGTATCGGCCTGGAAATTTAGGTGA 1317 0.3903 MDSGSPYHWLRELRYDSHGSNPMIPLIECAKCVASGSIKTADIGLEYISQISSPHGNGVQRMVTYFSEALGYKIVKHLPGVYKALNSSKISLSSDDILVQKYFYDLCPFLKFSYLITNQAIIESMEREKVVHIIDLHCSEPAQWINLIQTLKKRPGGPPFLKITGINEKKEALEQMSFHLTTEAGILDFPLQFNPIISKLEDVDFENLPVKTGDAVAISSVLQLHSLLATDDEMVSSSGAASFNMQRAAHLGQRTFAEWLERDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLQPKLLVITEQESNLNGCNLTERIDRALYFYGSLFDCLESTVTRTSVERQKLESMLLGEQIKNIITCEGVDRKERHEKLEQWIQRLKMAGFVKVPLSYNGRIEATNLLQRYSHKYKFKEENDCLLVCWSDRPLFSVSAWKFR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0532 438 Pfam GRAS domain family 26 436 IPR005202 -
Mtr3g0532 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 437 IPR005202 -
Mtr3g0532 438 ProSiteProfiles GRAS family profile. 13 436 IPR005202 -
Mtr3g0532 438 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0532 Mtr-Chr3 7113538 7117077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0532 1 438 GRAS Transcription Factor Family AT1G50420 48.330 2.46e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr3g0532 GRAS 3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0532 - - gmx:100779726 740.339