Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0530 ATGGCAGAGCTGGTTGGCGGAGCAGTTCTTTCGTCATTCTTTCCAGTCATTCTTAAGAGAATTGGCTCAAGAGATTTCAAAGACCTCTTCAATAAAAAGTTGGTTGAGAAACTTGAAGTCACACTGAATTCTATCGATCAATTGTTGAATGATGCAGAGACAAAGAAGTACCAAAACCAAAATGTGAAGAAGTGGTTTGATAATCTAAAACATGAGGTATATGAAGTAGATCAATTGTTGGATGAGATTGATACAAATGTAAAACTCAAGAGCAAGGATATGTTGGGATCAAAGGTTAAATACTTGCTTTCAGCTATCACTAATCCATTTGAATCTAGGATCAAAGAGTTGCTAGGCAAGCTAAAATATCTTGCAGAGCAAAAGGGTGATTTGGGATTGACACAAAGAAGTTGCACTAGTTATGAAGGCGCGGTTAGCCCACAATCCTCAAAAAGATCTCCAACTGCATCTTTGGTGGATGAATCTTCCATACGTGGTAGAGAAGGTGAAAAAGAAGAAATAATTAACTATTTGCTGTCTTACAAGGACAATGGCAACCAAGTATCAACTATCAGCATAGTTGGTTTGGGTGGGATGGGAAAGACCACCCTTGCTCAGCTTGTCTACAATGATTGCAGAATACAAGAGAAGTTTGAGATTAAAGCTTGGGTCCATGTATCTAAGTATTTTGATGTTATTGGACTTACCAAAATAATCATTGGGAAGTTTGATTCTGCAGCAAATAGCGAAGACTTAGAACTACTCCAACGGCAACTACAAAAAATATTAACAGCCAAGAACTATCTACTTGTTGTGGATGATGTCTGGAAACTGAATGAGGAAAGTTGGGAGACGTTACTACTTCCTTTTAACCAAGGATCTTCTACGAGTAAGATTATTGTGACAACACGCGATAAAAATGTAGCATCAATTGTGAAATCTACAAAGTTATTTGATTTGAAACAATTGGAGAAGAGTGACAGTTGGAGTTTATTTTCCACACTTGCTTTTCACGGCAAAAATGCAAGCGAATACCCAAAACTTGAATCAATTGGCAAAAAGATTGTAGATAAGTGTGGAGGGTTGCCTTTAGCTGTGAAAACATTGGGGAACCTCTTGCGGAAAAAATTCTCTAAACATGAATGGGAAAAGATACTAGAGGCTGACATGTGGCGCTTAGCTGATGGTGATGGTGATAGTAACATTAACTCGGCTTTGAGATTGAGTTACCATAACCTCCCTTCCAGTTTGAAACGCTGTTTTGCCTACTGTTCTGTATTTCCTAGGGGTTTTGAGTTTGACAGGGATGAATTGATCAAGCTTTGGATGGCAGAAGGTTTGCTGAAATACTGCGGAAGAGACAAAAGTGAAGAAGAATTGGGAAATGAATTCATGGATTACCTAGAGTCCATTTCATTTTTCGAACAATTAAACTATGATGGTCGTACAAGATTTCTCATGCATGATCTTGTTAATGATTTGGCAAAATCTGAGTCCCAAGAGTTTTGCTTACAAATTGAGAGTGATAATCTGCAAGATATAACTGAAAGAACACGTCACATTCGGTGCAATCTTGATTTCAAAGATGGTGAGCAAATATTAAAGCACATTTATAAGTTTAAGGGGTTACGCAGCCTGTTGGTAGTACGACCAAAGTATGGTCAAGAACGCTTCATGATAAGCAACAATGTGCAACGTGATCTGTTTTCAAAACTAAAATATCTTCGGATGTTGTCATTCTGTTATTGTGAACTCAAAGAACTAGCAGGTGAGATACGAAATCTAAAGCTGCTGCGTTATCTAGACATGAGAGGCACACAGATTAAAAGGTTGCCAGATTCTATTTGTAACCTTTATAATTTAGAGACACTAATATTGGAGAAGTGTTATGAATTGACTGAACTCCCTTCAAATTTTTACAAACTAGTCAGTTTACGCCATCTTAATCTTGAAGGCTGTAATATAAAGAAGATGCCAAAGAAGATAGGGAGGCTAAACCATCTTCAAACACTGAGTCATTTTGTTGTGGGAGAACAGAGTGGGTCTGATATTACGGAGTTGGGTAATCTCAATCATCTTCAAGGGAAACTTTGTATTTCAGGATTGGAACATGTCATTAGTCTCGAAGATGCGGCAGCAGCAAAATTGAAAGATAAGGAACATGTAGAAGAATTAAATATGGAGTGGAGTTACAAATTTAATACCAATGGAAGAGAGTCGGATGTCTTTGAGGCTCTTCAACCAAATAGCAACTTGGAGAAGCTCAACATAAAACACTACAAAGGTAATAGCTTTCCAAGTTGGCTAAGGGCTTGTCATTTATCCAACTTAGTATCTCTTCAACTGGATGGATGTGGACTATGTCCCCGACTTGAGCAGCTCCCCTCTCTCAGAAAGCTTTCTGTTTGTGACTGTGATGAAATAAAGATCATCGATCAAGAGTTTTACGACAACGATTCGACAATTGTTCCATTTAGGTCGCTTGAAGTTTTGAAATTTGAGAAGATGAACAATTGGGAGAAATGGTTTTGTCTTGAAGGGTTTCCTTTGCTTAAAAAGATTTCTATAAGAAAATGTCCCAAATTGAAAAAGGCAGTGCTGCCTAAACACCTTACTTCTTTACAAAAGCTGGAGATTAGTTATTGCAACAAGTTGGAGGAATTGTTATGCCTTGGAGAGTTTCCTTTGCTTAAAGAGATTTATATATTCGATTGTCCCAAATTGAAAAGGGCTCTGCCACAACACCTTCCTTCTTTACAAAAACTGCATGTATTTGATTGCAACGAGTTGGAGAAATGGTTTTGTCTTGAAGGGATTCCTTTGCTTAAAGAGATTTCTATAAGAAATTGCCCCAAATTAAAAAGGGCCTTGCTACCTCAACACCTTCCTTCTTTACAAAAACTGAAGATTTGTGATTGCAACAAGTTGGAGGAATTGTTATGCCTTGGAGAGTTTCCTTTGCTTAAAGAGATTTCTATATCCGATTGTCCCGAATTGAAAAGGGCTCTGCCTCAACACCTTCCTTCTTTACAAAATCTAGAGATTTGGGATTGCAACAAGTTGGAGGAATTGTTATGCCTTGGAGAGTTTCCTTTGCTTAAAGAGATTTCTATAAGAAATTGTCCCGAATTGAAAAGGGCTCTGCCTCAACACCTTCCTTCTTTACAAAATCTAGAGATTTGGGATTGCAACAAGTTGGAGGAATTGTTATGCCTTGGAGAGTTTCCTTTGCTTAAAGAGATTTCTATAAGAAATTGTCCCGAATTGAAAAGGGCTCTGCCTCAACACCTTCCTTCTTTACAAAAACTGCAGATTTGGGATTGCAACAAGATGGAGGCATCAATTCCCAAGAGTGATAATATGATAGAGTTAGATATACAGAGATGTGATAGAATTTTGGTAAATGAATTGCCGACCAGCTTGAAAAGGTTACTCCTTTGTGATAATCAATACACGGAGTTCTCCGTGGACCAAAATTTAATCAATTTTCCCTTTCTTGAAGAGTTGGAATTGGCTGGCTCTGTGAAATGTCCTTCTTTGGATTTAAGTTGCTATAATTCTCTTCAAAGACTTTCAATAGAAGGATGGGGCTCCTCCTCCTTGCCTTTGGAACTACACTTGTTCACCAGTCTTCGTTCTCTGTATCTGGACGATTGTCCAGAGCTGGAATCGTTTCCAATGGGTGGTTTGCCTTCCAACTTGAGGGACCTCAGAATACATAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCCTTGAAATGGTTCAGTGTTAGTGATGAGTTTGAAAACGTGGAGTCGTTCCCAGAGGAGAATCTGCTGCCACCAACTCTGAAGGATCTTTATTTGATTAATTGTTCAAAGCTAAGAAAAATGAACAAAAAGGGTTTTCTCCACCTCAAATCTCTTAATAAGCTATATATTCGGAACTGTCCTAGTCTTGAGAGCTTGCCAGAGAAGGAGGATCTACCCAACTCCCTTTCTAGTTTCTACTTTGGTCATTCTCAACTGTGGAATAATAAAGGAGAAGTATGA 4056 0.3834 MAELVGGAVLSSFFPVILKRIGSRDFKDLFNKKLVEKLEVTLNSIDQLLNDAETKKYQNQNVKKWFDNLKHEVYEVDQLLDEIDTNVKLKSKDMLGSKVKYLLSAITNPFESRIKELLGKLKYLAEQKGDLGLTQRSCTSYEGAVSPQSSKRSPTASLVDESSIRGREGEKEEIINYLLSYKDNGNQVSTISIVGLGGMGKTTLAQLVYNDCRIQEKFEIKAWVHVSKYFDVIGLTKIIIGKFDSAANSEDLELLQRQLQKILTAKNYLLVVDDVWKLNEESWETLLLPFNQGSSTSKIIVTTRDKNVASIVKSTKLFDLKQLEKSDSWSLFSTLAFHGKNASEYPKLESIGKKIVDKCGGLPLAVKTLGNLLRKKFSKHEWEKILEADMWRLADGDGDSNINSALRLSYHNLPSSLKRCFAYCSVFPRGFEFDRDELIKLWMAEGLLKYCGRDKSEEELGNEFMDYLESISFFEQLNYDGRTRFLMHDLVNDLAKSESQEFCLQIESDNLQDITERTRHIRCNLDFKDGEQILKHIYKFKGLRSLLVVRPKYGQERFMISNNVQRDLFSKLKYLRMLSFCYCELKELAGEIRNLKLLRYLDMRGTQIKRLPDSICNLYNLETLILEKCYELTELPSNFYKLVSLRHLNLEGCNIKKMPKKIGRLNHLQTLSHFVVGEQSGSDITELGNLNHLQGKLCISGLEHVISLEDAAAAKLKDKEHVEELNMEWSYKFNTNGRESDVFEALQPNSNLEKLNIKHYKGNSFPSWLRACHLSNLVSLQLDGCGLCPRLEQLPSLRKLSVCDCDEIKIIDQEFYDNDSTIVPFRSLEVLKFEKMNNWEKWFCLEGFPLLKKISIRKCPKLKKAVLPKHLTSLQKLEISYCNKLEELLCLGEFPLLKEIYIFDCPKLKRALPQHLPSLQKLHVFDCNELEKWFCLEGIPLLKEISIRNCPKLKRALLPQHLPSLQKLKICDCNKLEELLCLGEFPLLKEISISDCPELKRALPQHLPSLQNLEIWDCNKLEELLCLGEFPLLKEISIRNCPELKRALPQHLPSLQNLEIWDCNKLEELLCLGEFPLLKEISIRNCPELKRALPQHLPSLQKLQIWDCNKMEASIPKSDNMIELDIQRCDRILVNELPTSLKRLLLCDNQYTEFSVDQNLINFPFLEELELAGSVKCPSLDLSCYNSLQRLSIEGWGSSSLPLELHLFTSLRSLYLDDCPELESFPMGGLPSNLRDLRIHNCPKLIGSREEWGLFQLNSLKWFSVSDEFENVESFPEENLLPPTLKDLYLINCSKLRKMNKKGFLHLKSLNKLYIRNCPSLESLPEKEDLPNSLSSFYFGHSQLWNNKGEV* 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0530 1351 PRINTS Disease resistance protein signature 190 205 - -
Mtr3g0530 1351 PRINTS Disease resistance protein signature 262 276 - -
Mtr3g0530 1351 PRINTS Disease resistance protein signature 359 373 - -
Mtr3g0530 1351 PRINTS Disease resistance protein signature 869 885 - -
Mtr3g0530 1351 SUPERFAMILY L domain-like 487 951 - -
Mtr3g0530 1351 Gene3D - 322 414 IPR042197 -
Mtr3g0530 1351 Gene3D - 149 318 IPR027417 -
Mtr3g0530 1351 Coils Coil 31 55 - -
Mtr3g0530 1351 PANTHER DISEASE RESISTANCE PROTEIN RP 19 977 IPR044974 GO:0006952
Mtr3g0530 1351 PANTHER OS05G0414200 PROTEIN 19 977 - -
Mtr3g0530 1351 Gene3D Ribonuclease Inhibitor 868 955 IPR032675 -
Mtr3g0530 1351 Gene3D Ribonuclease Inhibitor 960 1071 IPR032675 -
Mtr3g0530 1351 Gene3D Ribonuclease Inhibitor 714 867 IPR032675 -
Mtr3g0530 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 424 IPR027417 -
Mtr3g0530 1351 Gene3D Ribonuclease Inhibitor 556 706 IPR032675 -
Mtr3g0530 1351 SMART LRR_typ_2 595 618 IPR003591 -
Mtr3g0530 1351 SMART LRR_typ_2 642 665 IPR003591 -
Mtr3g0530 1351 Pfam Rx N-terminal domain 12 91 IPR041118 -
Mtr3g0530 1351 SUPERFAMILY RNI-like 1046 1337 - -
Mtr3g0530 1351 Gene3D Ribonuclease Inhibitor 1072 1349 IPR032675 -
Mtr3g0530 1351 MobiDBLite consensus disorder prediction 143 160 - -
Mtr3g0530 1351 CDD AAA 166 304 - -
Mtr3g0530 1351 MobiDBLite consensus disorder prediction 143 165 - -
Mtr3g0530 1351 Pfam NB-ARC domain 168 411 IPR002182 GO:0043531
Mtr3g0530 1351 Gene3D - 30 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0530 Mtr-Chr3 7077113 7103938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0530 188 660 WRKY Transcription Factor Family AT5G45050 23.608 1.24e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0530 - - mtr:MTR_3g022790 2718.34