Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0525 ATGACAGAGATTTTTGGTGGGGCATTTCTTTCGCCACCTGTGTTTCAAGTGATTCTTGAGAGGTTAGCTTCAAGTGATTTCAGACTCAACTTCGGCGCAAGGCTGATGAAAAGACTTGAAATCGCACTGGTTTCTATTAAAAAAGTGATGGATGACGCAGATACATTGCAGTACCAAACCCTGAAGAGTTGGCTTGATAATCTCAAACATGAGGTATACGAAGTAGAGCAACTATTGGATGTGATTGCTACTGACATACAACGAAAGGGAAAGAAGAAACGACGCTTTCGTTCAAGTTCTATTGATCCAGGATTTGAATCTATGATTGTAGTATCGCTGAAGAGGATATATGCTCTTGCAGAGAAAAATGATAGATTGAGACGTGACTATAGTGATAGAAGAGGAGTCACTCTTGGGATATTACCAACTGCATCTTTCATGGATGATTATCATGTCATATATGGTAGAGGGAATAGATTTGGATTTCATGAATTAAATAATGTTAATTATGAGATTGGAGTTAGTTGGAAATTATTAAGCGAATTTGCAAATGTATCTTTGGTGGATGAATCGGTCATATATGGTCGAGAGCATGAGAAAGAAGAAATAATCAATTTCTTGCTTTCTGATAGTGACAGTGACAACCAGGTGCCCATAATCAGTATAGTGGGTCTGATTGGGATAGGTAAGACAACCCTTGCCCAGCTTGTTTACAATGACCACAGGATAGTGGAGCAATATGAACTTAAAGCTTGGGTCTATCTTTCAGAATCTTTTGATGTTCTTCGTCTCGCCCAAACAATTCTCAAGTCAATTCATTGTTCACCACGAGAATTTAGTAATGACTTGATAATGCTCCAACGTGAATTGCAACATATGCTGAGGGGAAAGAAATATTTGCTTGTTCTAGATGGTGTCAGGAACATAGATGGGAAGATATGGGAGCAGTTACTACTTCTTTTTAAATGTGGATCTTCAGGAAGTAAGATGATCGTGACAACACGGGACAAGGAAGTAGCATCAATCATGAGATCCACCCGGCTACTTCATTTATATCAATTGGAGGAAAGTGACTCTTGGAGGATATTTGTGAATCATGCTTTTCGAGGCAGGAATTTGTTTGATTTTCCAAATCTTGAGTCGGTTATCAAGAAAGTGGCAGAAAAGTGTGGAGGGTTGCCTTTAGCTCTGAAAACATTGGGTAATCTTTTGAGAATACGATTTTCTAAACTTGAATGGGATCAGATATTGGAGACTGATTTGTGGTGTTTATCAGAGGGTGAGAACAACATTAACCCCGTACTAAGATTGAGTTTCTTTAACCTCCCTTCCGATCTGAAGCGTTGTTTTGCTTATTGTTCTATATTTCCCAAGGGCTATGAGTTTGAGAAGAGTGAACTAATTAAGCTTTGGATGACAGAAGATTTGTTGAAGTGTTGCGGAAGAGACAAAAGTGAACAAGAGTTGGGTAATGAATTCTTTGATCATCTAGTGTCAATATCATTTTTCCTAAGTATGCCATTATGGGATGGTAAGTACTACATGCATGATCTTGTTAATGATTTAGCCAATTCAGTGTCAGGAGAATTCTGTTTCCGTATAGAAGGTGAAAATGTGCAAGATATCTCAGAAAGGACACGTAACATTTGGTGCTGCCTTGATTTGAAGGATGGTGACAGAAAACTAGAGCATATTCACAAAGTTACTGGACTACGCAGTCTGATGGTAGAAGCACAGGGCTACGGTGACCAACGCTTTAAGATAAGCACCAATGTGCAGCATAATTTGTTTTCAAGACTAAAATATTTGCGGATGCTGTCTTTCTCTGGTTGCAACCTCTTAGAGCTATCCGATGAGATAAGGAATTTAAAGCTTTTGCGCTATCTAGACCTTTCCTACACTGACATTGTAAGCTTACCTAATTCCATTTGTATGCTATATAATTTGCAGACACTCTTATTGGAAGAGTGCTTTAAATTGACTAAGCTACCTTCAGATATCTACAAACTCGTCAATTTACGTTATCTTAATCTGAAAGGCACTCATATTAAGAAGATGCCAACGAAGATAGGAGCATTAGACAAGCTTGAGATGCTGAGTGATTTTTTTGTCGGAAAGCAGCGTGGATTTGATATTAAGCAGTTGGGGAAACTCAACCAACTTCAAGGAAGGCTTCAAATTTCTGGGTTGGAAAATGTCAAAAAAACTGCACATGCTGTGGCAGCGAATTTGGAAGATAAAGAACATTTAGAAGAATTAAGTATGTCATATGATGGATGGAGAAAAATGAATGGATCAGTAACTAAAGCAGATGTCTCTGTCTTGGAGGCTCTTCAACCAAATAAAAACCTCATGAGGCTCACCATCAAAGACTATGGAGGCAGTAGCTTTCCAAATTGGGTTGGGTATCGTCATTTACCCAATTTAGTATCTCTTGAATTGTTGGGATGTAAATTCTGTTCCCAGTTACCACCACTTGGGCAGTTCCCCTTTCTCGAGAAGCTTTCCATTTCAGGCTGTGATGGAATAGAGACCATTGGAACAGAGTTTTGCGGCTATAATGCTTCAAGTGTTCCATTTAGATCCCTTGTAACTTTGCGATTTGAGCAAATGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTACAAGAGCTTTGTATAAAACATTGTCCCAAGTTGAAAAGTTCCCTGCCTCAACACCTTCCTTCATTGCAAAAATTGGAGATTATTGATTGCCAAGAGCTGGAGGCTTCAATTCCCAAGGCTGATAATATCAGTAAGCTAGAACTAAAGAGATGTGATGATATTTTGATAAATGAATTGCCCTCTACCTTGAAAACGGTCATCCTTGGTGGAACTCGCATCATTCGATCCTCCCTAGAGAAAATTCTATTTAACAGTGCCTTTCTAGAAGAGTTGGAAGTTGAAGACTTCTTTGATCATAATCTAGAATGGTCCTCTTTGGATATGTGTAGCTGTAATTCTCTTCGCACTCTAACTATAACAGGTTGGCACTCTTCCTCCTTGCCTTTTGCTCTACACTTGCTCACCAATCTTAATTCTCTCGTTTTGTACGATTGTCCACTGCTGGAGTCGTTTTTCGGCAGGCAGTTACCTTCCAGCCTATGCAGCCTCCGAATAGAAAGATGTCCTAAATTAATGGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCGATTCTCTGAAACAATTCAGTGTTAGTGATGATTTTCAAATCTTAGAGTCCTTTCCGGAGGAGAGTCTGCTTCCATCAACTATTAAATCCTTTGAGTTAACAAATTGTTCCAACCTAAGAAAAATAAACTACAAGGGTCTTCTCCACCTCACTTCACTTGAATCTCTATGTATTGAAGACTGCCCTTGTCTTGACAGCTTGCCAGAGGAGGGTCTACCCAGCTCCCTTTCTACTTTGTCCATTCATGACTGCCCATTAATTAAGCAGAAGTACCAAAAGGAGGAAGCTGAGCTTTGGCATACAATTAGTCACATTCCTGATGTAACAATTTCCTGA 3543 0.3937 MTEIFGGAFLSPPVFQVILERLASSDFRLNFGARLMKRLEIALVSIKKVMDDADTLQYQTLKSWLDNLKHEVYEVEQLLDVIATDIQRKGKKKRRFRSSSIDPGFESMIVVSLKRIYALAEKNDRLRRDYSDRRGVTLGILPTASFMDDYHVIYGRGNRFGFHELNNVNYEIGVSWKLLSEFANVSLVDESVIYGREHEKEEIINFLLSDSDSDNQVPIISIVGLIGIGKTTLAQLVYNDHRIVEQYELKAWVYLSESFDVLRLAQTILKSIHCSPREFSNDLIMLQRELQHMLRGKKYLLVLDGVRNIDGKIWEQLLLLFKCGSSGSKMIVTTRDKEVASIMRSTRLLHLYQLEESDSWRIFVNHAFRGRNLFDFPNLESVIKKVAEKCGGLPLALKTLGNLLRIRFSKLEWDQILETDLWCLSEGENNINPVLRLSFFNLPSDLKRCFAYCSIFPKGYEFEKSELIKLWMTEDLLKCCGRDKSEQELGNEFFDHLVSISFFLSMPLWDGKYYMHDLVNDLANSVSGEFCFRIEGENVQDISERTRNIWCCLDLKDGDRKLEHIHKVTGLRSLMVEAQGYGDQRFKISTNVQHNLFSRLKYLRMLSFSGCNLLELSDEIRNLKLLRYLDLSYTDIVSLPNSICMLYNLQTLLLEECFKLTKLPSDIYKLVNLRYLNLKGTHIKKMPTKIGALDKLEMLSDFFVGKQRGFDIKQLGKLNQLQGRLQISGLENVKKTAHAVAANLEDKEHLEELSMSYDGWRKMNGSVTKADVSVLEALQPNKNLMRLTIKDYGGSSFPNWVGYRHLPNLVSLELLGCKFCSQLPPLGQFPFLEKLSISGCDGIETIGTEFCGYNASSVPFRSLVTLRFEQMSEWKEWLCLEGFPLLQELCIKHCPKLKSSLPQHLPSLQKLEIIDCQELEASIPKADNISKLELKRCDDILINELPSTLKTVILGGTRIIRSSLEKILFNSAFLEELEVEDFFDHNLEWSSLDMCSCNSLRTLTITGWHSSSLPFALHLLTNLNSLVLYDCPLLESFFGRQLPSSLCSLRIERCPKLMASREEWGLFQLDSLKQFSVSDDFQILESFPEESLLPSTIKSFELTNCSNLRKINYKGLLHLTSLESLCIEDCPCLDSLPEEGLPSSLSTLSIHDCPLIKQKYQKEEAELWHTISHIPDVTIS* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0525 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 453 IPR027417 -
Mtr3g0525 1180 PANTHER OS05G0414200 PROTEIN 28 1042 - -
Mtr3g0525 1180 SUPERFAMILY RNI-like 860 1155 - -
Mtr3g0525 1180 PRINTS Disease resistance protein signature 219 234 - -
Mtr3g0525 1180 PRINTS Disease resistance protein signature 293 307 - -
Mtr3g0525 1180 PRINTS Disease resistance protein signature 390 404 - -
Mtr3g0525 1180 PRINTS Disease resistance protein signature 621 637 - -
Mtr3g0525 1180 Pfam Rx N-terminal domain 14 95 IPR041118 -
Mtr3g0525 1180 Gene3D - 439 525 IPR036388 -
Mtr3g0525 1180 Gene3D Ribonuclease Inhibitor 560 948 IPR032675 -
Mtr3g0525 1180 Pfam NB-ARC domain 196 418 IPR002182 GO:0043531
Mtr3g0525 1180 Gene3D - 353 438 IPR042197 -
Mtr3g0525 1180 SUPERFAMILY L domain-like 515 933 - -
Mtr3g0525 1180 PANTHER DISEASE RESISTANCE PROTEIN RP 28 1042 IPR044974 GO:0006952
Mtr3g0525 1180 Gene3D - 177 349 IPR027417 -
Mtr3g0525 1180 Gene3D Ribonuclease Inhibitor 949 1160 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0525 Mtr-Chr3 6975792 6979334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0525 193 846 WRKY Transcription Factor Family AT5G45050 23.938 3.78e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0525 - - mtr:MTR_3g021170 1498.41