Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0524 ATGTCTTCATCATCATCGTCATCAACCTTCAATTTGAATTCTCATCAATGGATCTACGACGTGTTCATAAATTTCAGAGGTGAAGACACCCGCAAGAGCTTGGTTTCTCATCTGTATGCTGCTCTATTGAACGCGGGAATCAACACTTTTCTTGACGATGAAAAGCTTAAAAAGGGATGGGAAGTAAAACCAGAATTACTGCGAGCAATACACGGGTCTCAAATCTGTTTAGTTGTTTTCTCACAACACTACACTCAATCTAGTTGGTGTCTTGTTGAACTGCTGAAAATCATGGAAAACCGCAGATCTAACAATCGCCAAGTGGTTATACCCATTTTTTACCATGTTGACCCATCCGTCGTTCGTCGTCAGGTTGGTGATTTTGGAAAAGCTTTGGAAGCTATTACCAAAAGAATTAACCCACCAAAAGAGAGGCAAGAACTGTTGCGGACGTGGAAGCGTGCTCTCACTCAAGCTGCAAATATTTCTGGGTGGGATTCCAGCACTTTCAGGAGTGAAAGTGAACTGGTGAATAAAATTGTTAAGGAAGTTCTGAAAAAGCTTGAAAGCAGCACATTCTTGCCTTCTCCTGAAAACCCAGTTGGACTACAGTCCCGTGTGGATCAGGTGATTCATTCAATTAAAAATCAATCAAGCAAAGTTTCCATGGTAGGGATCTGGGGCATGGGCGGGTTGGGTAAAACTACCATAGCCAAAGGTGTCTACAATAAAATTCATCACAAGTTTGTGCATAGAAGTAACATTGAGAATATTAGACAAACTTGCGAATCAGATAAAGGGTATATTCGTTTACAAAAACAACTTCTTTCAGATCTCTTCAAAACAGAGGAAACAATACACAACATTACAACAGGGACAGCTATAATCAACAAAAGAATCTCTGCAAAGAAAGTGCTCATTTTACTTGATGATGTGACCAAAGTACAGCAGGTAAAAGCCCTATGTGGAAATTATAAATGTTTAGGTTTTGGCAGTGTGATAATTATTACAACCAGGGATGCGCACATACTTAAGTTACTTGAAGCTCGCCCTGTCTGTACAGCAAAAGAAATGGACGAAGATGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAAAAATGCGACTCCAAGAGCCAATTTCAGTGAACTCTCAAAAAATGTAGTTAATTACTGTGGAGGGTTGCCCCTAGCTCTTGAAATTCTCGGATCTCACTTATTTGAAAGGACAAAGGAAGAATGGAAAAGTGTGCTATCAAAATTAGAAAAAATTCCCCATGAAGAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTGACAGAAGACACGAAAAAGGCTATATTTCTTGATGTATGTTGTTTCTTTATCGGCAAGGACAAAGACTATGTTACCGAGATACTAAATGGTTGTGGACTTTTTGCTGATATTGGAATAGCTGTCCTCATAGAGAGGAGCCTTCTAAAAGTCGAAAAGAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATAGTTCGCGGAAGTTCAATAAAAGATCCAGGGGAGCGTAGTCGGTTGTGGTTTCACGAAGATGCACATGATGTTTTGACAAATAATACGGGAACACAAAAAGTTGAGGGATTGATTTTGAACTTGCAAATAAAAGGCAAAGATAGCTTCAGTACCAATGTTTTCCAACAGATGCAGAACATGAGACTTTTGCAACTTGATTGTGTTGACCTCACTGGAGAATTTGCACATCTTTCCAAACAGCTGAGATGGGTCAATTGGCAACGATCTACCTTCAGCTGTATACCAAATGACTTTCATCAAGGAAATCTAGTTGTTTTAGAATTAAAATTTAGCAATGTTAAACAAGTTTGGAAGGAAACCAAGTTGTTGGACAAGCTAAAAATACTCAATCTCAGTCATTCCAAGTACTTGAAAAGCACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCCGAGGTACACCCGTCCATAGGAGTGCTCAAGAATATTCTTCTGATTAATTTGAAGGATTGTACAAGTCTTGGCAATCTACCAAGGGAGATCTATCAGCTGATATCTGTGAAAACTCTTATCCTTTTTGGTTGTTCAAAGATCGACAAATTGGAAGAAGATATAGTGCAAATGAAATCTTTGACGACTTTAGTTGCAGCAAATACTGGCATCAAACAAGCACCCTTTTCCATATTTAGATCAAAAAGCATTGTGTATATATCCCTATGCGGATATGAAGGATTATCACGTGATGTTTTTCCTTCCCTTATTTGGTCTTGGATGTCACCAACAATGAATTCATTGCCACATATTCCCCACACTGCTTTGGATGTAGAGAGTAATAGTTTGGTTGTGGGTTATCAATCATCAATGCGCCGTAGTTGTTCAGAACATAGAAGTGTTAGGATAGAATGCCAATCGGTGATTCAACTCATTCAAAATTTCAAAAATTTTTTTGATGGTCTCTATGGTGCAAATTTTACTGAATCAGAATCATTACTTGCATCACAAATCTCGGATCTTTCCTTGAAATCTCTTTTGATTACAATGGGAAGTTGCCACATAGTTGTCAATGCTCTTGGCAATAGCTTATCACAGGGATTAACAACCAATGATTCTTTCCTTCCGGGTGACAATTACCCCTCTTGGTTAGCCTATACAGGTGAAGGACCATTCGTACGATTTGAAGTGCCCGAGGACTGTGATGGTTGCTTGAAGGGAATAACTTTATATGTTGTTTATTCATCCACACCTGAAAACATGGAAACTGAATGTCTCACCAGTGTTTTGATAATTAATTACACAAAATTCACACTCCATATATACAAGCAAGAAACAGTAATGTCCTTTAACAATGAAGATTGGCAGAGTGTAATATCAAATTTAGCAGTTGGGGACAATGTGGGGATTTTTGTAGCTTTTGGGCATGGATTGACCGTTAAGAAGACAGTTGTCTATCTAATATATGGCCAATCAAGTTCTATGCAAATTGAGCCATCAATTAGTGTGGAAGTTAAAGCATCTAGTCAAGTACAAATGGAGCCATTACCTGAACTGGAAGTGCAACCATCATCTAATGTGAAAAAGGAGGCATCGCCTGAAGATAAAGTGCAGCCATCATTTGATGTGAAGATGGATCCGTTATCTCAACTGGAAGTGCAACCATTATCTAATGTGAAAAGGGATCCATCACTTGAAGATGAAGTGCAACCATCCCCTAGCATGAAGACGGATCCATTGCCTGGACTGGAAATGCAACCATCGTCTAATGTGAAAAGGGATCCATCGCCTATCATCAAGAATGACCCACTACGAAAGAGAAATAACAAAATATTTGTAAGATTTTCAAAGAAAGTGGGAGAATGTTTATGCTTGAATCAGAATAGAGGTCTCGACAATTTTTAA 3453 0.386 MSSSSSSSTFNLNSHQWIYDVFINFRGEDTRKSLVSHLYAALLNAGINTFLDDEKLKKGWEVKPELLRAIHGSQICLVVFSQHYTQSSWCLVELLKIMENRRSNNRQVVIPIFYHVDPSVVRRQVGDFGKALEAITKRINPPKERQELLRTWKRALTQAANISGWDSSTFRSESELVNKIVKEVLKKLESSTFLPSPENPVGLQSRVDQVIHSIKNQSSKVSMVGIWGMGGLGKTTIAKGVYNKIHHKFVHRSNIENIRQTCESDKGYIRLQKQLLSDLFKTEETIHNITTGTAIINKRISAKKVLILLDDVTKVQQVKALCGNYKCLGFGSVIIITTRDAHILKLLEARPVCTAKEMDEDESLELFSWHAFKNATPRANFSELSKNVVNYCGGLPLALEILGSHLFERTKEEWKSVLSKLEKIPHEEVQEKLRISYDGLTEDTKKAIFLDVCCFFIGKDKDYVTEILNGCGLFADIGIAVLIERSLLKVEKNNKLGMHDLIRDMGREIVRGSSIKDPGERSRLWFHEDAHDVLTNNTGTQKVEGLILNLQIKGKDSFSTNVFQQMQNMRLLQLDCVDLTGEFAHLSKQLRWVNWQRSTFSCIPNDFHQGNLVVLELKFSNVKQVWKETKLLDKLKILNLSHSKYLKSTPDFSKLPNLEKLIMKDCPSLSEVHPSIGVLKNILLINLKDCTSLGNLPREIYQLISVKTLILFGCSKIDKLEEDIVQMKSLTTLVAANTGIKQAPFSIFRSKSIVYISLCGYEGLSRDVFPSLIWSWMSPTMNSLPHIPHTALDVESNSLVVGYQSSMRRSCSEHRSVRIECQSVIQLIQNFKNFFDGLYGANFTESESLLASQISDLSLKSLLITMGSCHIVVNALGNSLSQGLTTNDSFLPGDNYPSWLAYTGEGPFVRFEVPEDCDGCLKGITLYVVYSSTPENMETECLTSVLIINYTKFTLHIYKQETVMSFNNEDWQSVISNLAVGDNVGIFVAFGHGLTVKKTVVYLIYGQSSSMQIEPSISVEVKASSQVQMEPLPELEVQPSSNVKKEASPEDKVQPSFDVKMDPLSQLEVQPLSNVKRDPSLEDEVQPSPSMKTDPLPGLEMQPSSNVKRDPSPIIKNDPLRKRNNKIFVRFSKKVGECLCLNQNRGLDNF* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0524 1150 Pfam TIR domain 19 192 IPR000157 GO:0007165
Mtr3g0524 1150 Gene3D - 18 187 IPR035897 -
Mtr3g0524 1150 Gene3D - 188 352 IPR027417 -
Mtr3g0524 1150 Gene3D Ribonuclease Inhibitor 555 873 IPR032675 -
Mtr3g0524 1150 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1006 - -
Mtr3g0524 1150 Pfam NB-ARC domain 205 437 IPR002182 GO:0043531
Mtr3g0524 1150 SUPERFAMILY L domain-like 498 774 - -
Mtr3g0524 1150 MobiDBLite consensus disorder prediction 1030 1119 - -
Mtr3g0524 1150 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1006 IPR044974 GO:0006952
Mtr3g0524 1150 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 165 IPR035897 -
Mtr3g0524 1150 PRINTS Disease resistance protein signature 223 238 - -
Mtr3g0524 1150 PRINTS Disease resistance protein signature 299 313 - -
Mtr3g0524 1150 PRINTS Disease resistance protein signature 392 406 - -
Mtr3g0524 1150 PRINTS Disease resistance protein signature 630 646 - -
Mtr3g0524 1150 Gene3D - 357 441 IPR042197 -
Mtr3g0524 1150 ProSiteProfiles TIR domain profile. 17 188 IPR000157 GO:0007165
Mtr3g0524 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 450 IPR027417 -
Mtr3g0524 1150 SMART till_3 18 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0524 Mtr-Chr3 6930400 6937970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0524 19 747 WRKY Transcription Factor Family AT4G12020 31.067 2.63e-84 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0524 - - mtr:MTR_8g011710 1247.65