Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0522 ATGGCAGGGGTTATTGATGGGGCATTTCTTTCGTCTGTCTTTTTAGTGATTCGTGAGAAGTTGGCTTCTAGAGATTTCAGAAACTACTTCCATGAAATGCTGCGGAAAAAACTTGAAATCACACTGGATTCTATCAATGAAGTACTGGATGAAGCAGATGTAAAGGAATACCAACACCGAAACGTGCGGAAATGGCTTGATGATATCAAACACGAGGTATTTGAATTAGAGCAACTATTGGATGTGATTGCTGATGACGCACAACCAAAGGGCAAGATACGACGCTTTCTTTCACGTTTTATTAATCGAGGATTTGAAGCTAGGATTAAAGCATTGATACAGAACCTAGAGTTTCTTGCAGATCAAAAGGATAAATTGGGACTTAATGAAGGTAGAGTGACTCCCCAGATATTACCAACTGCACCTTTGGCACATGTATCTGTCATATATGGTAGAGAGCATGAGAAAGAGGAAATAATTAAATTTTTACTTTCAGACAGTCACAGTCACAACCATGTACCCATAATCTGTATAGTGGGTATGATTGGGATGGGTAAGACAACCCTTGCCCGGCTTGTTTACAAGGACCACAAGATACTGGAGCAATTTGAACTTAAAGCTTGGGTCTATGTTTCAAAATCTTTTGATCTTGTTCATCTCACCCGATCAATTCTCAGGCAATTTCATTTATCAGCAGCTTATAGTGAAGACTTAGAAATACTCCAACGTCAATTACAACAGATAGTAACTGGCAAGAAATACTTGCTTGTTTTAGACAATATCTGTAGCGGAAAAGCGGAATGTTGGGAGATGCTACTACTTCCGTTTAGCCATGGATCTTCTGGAAGTAAGATGATGGTGACAACGCATGACAAGGAAGTAGCATCAATCATGGGATCCACCCAGCTAGTTGATTTAAATCAATTGGAGGAGAGTGACTCTTGGAGTTTATTTGTGAGATATGCTTTTCGAGGTAGGGATGTGTTTGAATATCCAACTCTTGTATTGATAGGCAAGAAAATAGTAGAAAAGTGTGGGGGGATTCCTTTAGCTCTAAAAACAATGGGGCAACTTTTGCAAAAAAAATTCTCTGTAACCGAATGGATGAAGATATTGGAGACTGATATGTGGCATTTATCAGATGGTGACAGCATTAACCCCGTACTGAGATTGAGTTACCTTAACCTCCCATCCAATCTGAAGCGTTGTTTTGCTTATTGTTCTATATTTCCCAAGGGCTATGAGTTTGAGAAGGGTGAATTAATCAAGCTTTGGATGGCAGAAGGCTTGCTAAAGTGTTGGGAAAGACACAAAAGTGAAGAAAAGTTGGGCAATGAATTCTTCAATCATCTAGTGTCAATATCGTTTTTCCAACAATCAGTAACTATGCCATTATGGGCTGGCAAGCACTACTTCATCATGCATGATCTTGTCAATGATTTAGCAAAATCAGTGTCAGGAGAATTCTGCTTAGAAATAGAGGGTGGCAACGTGCAAGATATCCCTAATAGGACACGTCATATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTGAAGCAGATTCATAAAATTAAAGGACTACACAGTCTGATGGTAGAAGCACAAGGCTATGGTGAAAAACGCTTTAAGATAAGCACCAGTGTGCAGCATAATTTGTTTTCAAGAATAAAATATTTGCGGATGTTGTCCCTTTCTGGTTGCAATCTCGTAAAGCTAGATGATGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCTAAAACTGAGATTGCAAGCTTACCTAATTCCATTTGTACGCTGTATAATTTGCAAACATTCTTATTGGAAGAATGTTTTAAATTGACCGAACTCCCTTCAGATTTTCACAAACTCATCAATTTGCGCCATCTTAATCTGAAAGGCACTCATATTAAGAAGATGCCAACAAAGCTCGAAGGGTTAAACAATCTTGAAATGCTGACTGATTTTGTTGTGGGAGAGCAGCGTGGGTTTGATATTAAGCAGTTGGGAAAACTAAACCAACTTCAAGGAAGCCTTCGAATTTCAGGGATGGAAAATGTCATTGATCTAGCAGATGCTATTGCAGCAAATTTGAAAGATAAGAAACATTTAAAAGAATTAAGTATGTCATATGATTATTGTCAAAAAATGGATGGCTCAATAACTGAGGCACATGCCTCTGTCATGGAGATTCTTCAACCAAATAGAAACCTCATGAGGCTCACCATCAAAGACTACAGAGGCAGAAGCTTTCCAAATTGGCTTGGCGATCTTTATTTACCCAAGTTAGTATCCCTTGAATTGTTGGGATGTAAATTCCATTCCGAATTGCCACCACTTGGGCAGTTCCCCTCTCTCAAGAAGCTTTCCTTTTCAGGCTGTGATGGAATAGAGATCATTGGTACAGAATTTTACGGCTATAATTCATCAAATGTTCCATTTAGATTCCTTGAAACATTGCGATTTGAGAACATGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTTCAAGAGCTTTGTATAAAACATTGTCCCAAGTTGAAAAGAGCCCTGCCTCAACACCTTCCTTCTTTGCAAAAATTGGAGATTACTGATTGCCAAGAGTTGGAGGCTTCAATTCCCAAGGCTGATAATATCACTGAGCTAGAACTGAAGAGATGTGATGACATTTTGATAAATGAATATCCATCCAGCTTGAAAAGGGTCATCCTTTGTGGAACTCAGGTCATTAAATCCTCCCTAGAGAAAATTCTATTTAACAGTGTCTTTCTTGAAGAGTTGGAAGTTGAGGACTTCTTTGATTCAAATCTAGAATGGTCCTCTTTGGACATGTGTAGCTGTAATTCTCTTCGCACTTTAACTATAACAGGTTGGCACTCTTCCTCCTTGCCTTTTGCTCTACACTTGCTCACCAATCTTAATTCTCTCGTTTTGTACGATTGTCCATGGCTAGGGTCGTTTTCAGGCAGGCAGTTGCCTTCCAACCTATGCAGCCTCCGAATAGAAAGATGTCCTAAATTAATGGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCGATTCTCTGAAACAATTCAGTGTTAGTGATGATTTTCAAATCTTGGAGTCCTTTCCGGAGGAGAGTCTGCTTCCATCAACTATTAAATCCTTTGAGTTAACAAATTGTTCCAACCTAAGAAAAATAAACTACAAGGGTCTTCTCCACCTCACTTCACTTGAATCTCTATGTATTGAAGACTGCCCTTGTCTTGACAGCTTGCCAGAGGAGGGTCTACCCAGCTCCCTTTCTACTTTGTCCATTCATGACTGCCCATTAATTAAGCAGCTGTACCAAATGGAGGAAGGCGAGCATTGGCATAAAATTAGTCACATTCCTGATGTAACAATTTCCTGA 3420 0.3942 MAGVIDGAFLSSVFLVIREKLASRDFRNYFHEMLRKKLEITLDSINEVLDEADVKEYQHRNVRKWLDDIKHEVFELEQLLDVIADDAQPKGKIRRFLSRFINRGFEARIKALIQNLEFLADQKDKLGLNEGRVTPQILPTAPLAHVSVIYGREHEKEEIIKFLLSDSHSHNHVPIICIVGMIGMGKTTLARLVYKDHKILEQFELKAWVYVSKSFDLVHLTRSILRQFHLSAAYSEDLEILQRQLQQIVTGKKYLLVLDNICSGKAECWEMLLLPFSHGSSGSKMMVTTHDKEVASIMGSTQLVDLNQLEESDSWSLFVRYAFRGRDVFEYPTLVLIGKKIVEKCGGIPLALKTMGQLLQKKFSVTEWMKILETDMWHLSDGDSINPVLRLSYLNLPSNLKRCFAYCSIFPKGYEFEKGELIKLWMAEGLLKCWERHKSEEKLGNEFFNHLVSISFFQQSVTMPLWAGKHYFIMHDLVNDLAKSVSGEFCLEIEGGNVQDIPNRTRHIWCCLDLEDGDRKLKQIHKIKGLHSLMVEAQGYGEKRFKISTSVQHNLFSRIKYLRMLSLSGCNLVKLDDEIRNLKLLRYLDLSKTEIASLPNSICTLYNLQTFLLEECFKLTELPSDFHKLINLRHLNLKGTHIKKMPTKLEGLNNLEMLTDFVVGEQRGFDIKQLGKLNQLQGSLRISGMENVIDLADAIAANLKDKKHLKELSMSYDYCQKMDGSITEAHASVMEILQPNRNLMRLTIKDYRGRSFPNWLGDLYLPKLVSLELLGCKFHSELPPLGQFPSLKKLSFSGCDGIEIIGTEFYGYNSSNVPFRFLETLRFENMSEWKEWLCLEGFPLLQELCIKHCPKLKRALPQHLPSLQKLEITDCQELEASIPKADNITELELKRCDDILINEYPSSLKRVILCGTQVIKSSLEKILFNSVFLEELEVEDFFDSNLEWSSLDMCSCNSLRTLTITGWHSSSLPFALHLLTNLNSLVLYDCPWLGSFSGRQLPSNLCSLRIERCPKLMASREEWGLFQLDSLKQFSVSDDFQILESFPEESLLPSTIKSFELTNCSNLRKINYKGLLHLTSLESLCIEDCPCLDSLPEEGLPSSLSTLSIHDCPLIKQLYQMEEGEHWHKISHIPDVTIS* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0522 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 407 IPR027417 -
Mtr3g0522 1139 Pfam Rx N-terminal domain 10 84 IPR041118 -
Mtr3g0522 1139 Gene3D - 134 306 IPR027417 -
Mtr3g0522 1139 PANTHER DISEASE RESISTANCE PROTEIN RP 21 1018 IPR044974 GO:0006952
Mtr3g0522 1139 Coils Coil 102 129 - -
Mtr3g0522 1139 Pfam NB-ARC domain 153 373 IPR002182 GO:0043531
Mtr3g0522 1139 PANTHER OS05G0414200 PROTEIN 21 1018 - -
Mtr3g0522 1139 SUPERFAMILY RNI-like 819 1115 - -
Mtr3g0522 1139 Gene3D Ribonuclease Inhibitor 902 1134 IPR032675 -
Mtr3g0522 1139 SUPERFAMILY L domain-like 474 879 - -
Mtr3g0522 1139 Coils Coil 35 55 - -
Mtr3g0522 1139 Gene3D - 393 485 IPR036388 -
Mtr3g0522 1139 Gene3D - 308 392 IPR042197 -
Mtr3g0522 1139 CDD AAA 150 261 - -
Mtr3g0522 1139 Gene3D Ribonuclease Inhibitor 520 901 IPR032675 -
Mtr3g0522 1139 PRINTS Disease resistance protein signature 175 190 - -
Mtr3g0522 1139 PRINTS Disease resistance protein signature 248 262 - -
Mtr3g0522 1139 PRINTS Disease resistance protein signature 345 359 - -
Mtr3g0522 1139 PRINTS Disease resistance protein signature 862 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0522 Mtr-Chr3 6891935 6905681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0522 562 658 WRKY Transcription Factor Family AT4G12020 32.653 1.87e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0522 - - mtr:MTR_3g021170 1544.25