Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0520 ATGGCAGAGTTGGTAGCCGGGGCATTTCTTCAGTCTTCCTTTCAAGTGATTATTGAGAAGTTGGCTTCCGTTGGTATCAGAGACTACTTTAGTAGTAACAATGTTGATGAACTTGTGAAAGAACTTAATATTGCACTTGATTCTATCAACCAAGTACTAGACGAAGCAGAGATAAAGCAGTACCAAAACAAATATGTGAAGAAGTGGCTTGATGAACTTAAACATGTTGTTTATGAGGCAGACCAACTATTAGATGAGATTTCTACTGATGCAATGATAAATAAGCAAAAAGCTGAATCTGAACCACTTACCACCAATTTATTGGGTTTCGTTTCAGCTTTAACTACAAATCCATTTGAATGTAGGCTCAATGAACAACTGGATAAACTAGAACTTCTTGCAAAGCAAAAGAAAGATTTGAGATTGGGAGAAGGTCCTAGTGCTAGTAATGAAGGCTTAGTCAGTTGGAAACCTTCAAAAAGGTTGTCGTCTACAGCTCTCGTGGATGAGTCAAGCATATATGGTAGGGATGTTGATAAGGAAAAATTAATCAAGTTTTTACTTGAAGGCAATGACGGTGGCAACCGGGTTCCAATAATCAGCATAGTGGGTTTAGGAGGGATGGGGAAAACCACCCTTGCTAAGCTTGTGTACAACGACAACAAGATAAAGAAGCATTTTGAACTTAAAGCATGGGTCTATGTTTCAGAATCTTTCGATGTTTTTGGACTCACCAAAGCAATTCTCAAGTCATTTAATCCTTCAGCAGATGGTGAATACTTGGATCAACTCCAACATCAACTCCAAGACATGCTAATGGGAAAGAAATACTTGCTTGTTTTAGATGATATATGGAATGGGAGTGTAGAATATTGGGAGCAGCTACTACTTCCGTTTAACCATGGATCTTCTGGAAGTATGATTATCGTGACAACACGTGAAAAGGAGGTAGCATGTCATGTTCTAAAATCAACCAAATTATTTGATTTACAACAATTGGAAAAAAGCAATTGTTGGAGATTATTTGTGACACATGCTTTTCAAGGAAAAAGTGTGTGTGAATATCCAAATCTTGAAACAATTGGGAGGAAAATAGTGGACAAGTGTGGAGGGTTGCCTTTAGCTATAAAATCATTGGCACAACTTCTGCATAAAAAAATTTCTGAACATGAATGGATTAAGATATTGGAGACTGATATGTGGCGTTTATCAGATGGGGACCACAACATTAACTCAGTACTAAGATTGAGTTACCATAATCTCCCTTCGGATCTAAAGCGTTGCTTTGCGTATTGTTCCATTTTCCCCAAGGGCTATAGATTTGAAAAAGAAGTATTGATCAAGCTTTGGATGGCAGAAGGTTTGCTGAAGTGTTGCGGATCAGACAAAAGTGAAGAAGAGTTTGGTAATGAAATTTTCGGTGATCTTGAGTCAATTTCATTTTTCCAGCGATCATTTGGTACATATGAGGACTATTGCATGCATGATCTTGTCAATGATTTAACAAAATCAGTGTCAGGAGAATTTTGTATGCAAATAGAGGGTGCTAGGGTGGAAGGTATCAATGAAAGGACACGTCATATTCAGTTCGCTTTTTCATCACAATGTGGTGATGATTTATTTTTGACGAATCCAAACGGTGTTGATAACTTACTAGAGCCAATTTGTGAGCTTAAGGGACTACGAAGTCTGATGTTAGGACAAGGCATGGGAGTTGTAATGTGTATTACCAACAACATGCAACATGATCTATTTTCAAGACTAAAATTTTTGCGGATGCTAACATTTAGTGGTTGGCATCTCTCAGAGCTTGTGGATGAGATAGGAAAGCTAAAACTTTTGCGTTATCTAGACCTTACATACACTGGTATTAAAAGCTTACCTGATACCATTTGTATGTTGTATAATTTGCAAACACTCTTGTTAAAAGACTGTTATCAATTGACTGAGCTCCCTTCAAATTTTTCCAAACTCATCAATTTACGTCATCTTGAGCTCCCTTGTATAAAGAAAATGCCAAAGAATATGGGAAAGCTAAATAATCTTCAGACCTTGTCATATTTTATTGTGGAAGCCCATAATGAATCTGATCTCAAAGATTTGGCAAAACTCAACCATCTTCATGGAACAATTCATATTAAAGGGTTGGGTAATGTCAGTGATACTGCAGATGCTGCCACATTAAATTTGAAAGATATAGAAGAATTACATACTGAGTTCAATGGCGGACGAGAAGAAATGGCTGAAAGTAACCTGTTGGTTTTGGAGGCTCTAAAACCAAATAGCAACTTGAAGAAGCTCAACATTACACACTACAAAGGTAGTAGATTTCCAAATTGGCTAAGGGGTTGTCATTTACCCAACTTAGTATCTCTTGAACTTAAGGGTTGTAAGTTATGTTCCTGTTTGCCAACACTTGGACAACTCCCTTCTCTCAAGAAACTTTCCATTTATGACTGTGAAGGAATAAAGATCATTGATGAAGAGTTTTATGGCAATAATTCAACAATTGTTCCATTCAAGTCCCTTGAATATTTGAGATTTGAGGATATGGTCAACTGGGAGGAATGGATATGTGTAAGGTTTCCTCTGCTTAAAGAGCTTTATATAGAAAATTGTCCTAAATTGAAAAGAGTATTGCCTCAACATCTTCCATCTTTACAAAATTTGTGGATCAATGATTGCAACATGTTGGAGGAATGTTTATGCCTTGGAGAGTTTCCTTTGCTTAAAGAGTTTTTAATAAGAAATTGTCCCGAATTGAAAAGGGCTCTTCCTCAACACCTTCCTTCTTTACAAAAACTGGGTGTATTTGATTGCAACGAGTTGGAGGAATTGTTATGCCTTGGAGAGTTTCCTTTGCTTAAAGTGTTTTCTATAAGAAATTGTCTCGAATTGAAAAGGGCTCTGCCTCAACACCTTCCTTCTTTACAAAAACTGGGTGTATTTGATTGCAACGAGTTGGAGGCATCAATTCCCAAGAGTGATAATATGATAGAGTTAGATATACAGAATTGTGATAGAATTTTGGTAAATGAATTGCCGACTAGCCTGAAAAAGTTACTCCTTCGGCGAAATCGGTACACGGAGTTCTCCGTGCACCAAAATTTAATCAATTTTCCCTTTCTTGAAGCGTTGGAGTTGAATTGGAGTGGCTCTGTGAAATGTCCTTCTTTGGATTTACGTTGCTATAATTTTCTTCGTGATCTTTCAATAAAAGGCTGGTGCTCCTCCTCCTTGCCTTTGGAACTACACTTGTTCACCAAACTTCAATCTCTGTATCTGTACGATTGTCCAGAGCTGGAATCCCTTCCAATGGGTGGTTTGCCTTCCAACTTGATACAACTTGGAATATACAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCCTTGAAATGTTTCACTGTTGCTGATGAGTTTGAAAACGTGGAGTCCTTCCCAGAGGAGAATCTGCTGCCACCAACTCTAGAGATCCTTCAATTGTATAATTGTTCAAAGCTAAGAATAATGAACAAAAAGAGTTTTCTCCACCTCAAATCTCTTAATCGGCTATATATTTTAGACTGA 3591 0.3757 MAELVAGAFLQSSFQVIIEKLASVGIRDYFSSNNVDELVKELNIALDSINQVLDEAEIKQYQNKYVKKWLDELKHVVYEADQLLDEISTDAMINKQKAESEPLTTNLLGFVSALTTNPFECRLNEQLDKLELLAKQKKDLRLGEGPSASNEGLVSWKPSKRLSSTALVDESSIYGRDVDKEKLIKFLLEGNDGGNRVPIISIVGLGGMGKTTLAKLVYNDNKIKKHFELKAWVYVSESFDVFGLTKAILKSFNPSADGEYLDQLQHQLQDMLMGKKYLLVLDDIWNGSVEYWEQLLLPFNHGSSGSMIIVTTREKEVACHVLKSTKLFDLQQLEKSNCWRLFVTHAFQGKSVCEYPNLETIGRKIVDKCGGLPLAIKSLAQLLHKKISEHEWIKILETDMWRLSDGDHNINSVLRLSYHNLPSDLKRCFAYCSIFPKGYRFEKEVLIKLWMAEGLLKCCGSDKSEEEFGNEIFGDLESISFFQRSFGTYEDYCMHDLVNDLTKSVSGEFCMQIEGARVEGINERTRHIQFAFSSQCGDDLFLTNPNGVDNLLEPICELKGLRSLMLGQGMGVVMCITNNMQHDLFSRLKFLRMLTFSGWHLSELVDEIGKLKLLRYLDLTYTGIKSLPDTICMLYNLQTLLLKDCYQLTELPSNFSKLINLRHLELPCIKKMPKNMGKLNNLQTLSYFIVEAHNESDLKDLAKLNHLHGTIHIKGLGNVSDTADAATLNLKDIEELHTEFNGGREEMAESNLLVLEALKPNSNLKKLNITHYKGSRFPNWLRGCHLPNLVSLELKGCKLCSCLPTLGQLPSLKKLSIYDCEGIKIIDEEFYGNNSTIVPFKSLEYLRFEDMVNWEEWICVRFPLLKELYIENCPKLKRVLPQHLPSLQNLWINDCNMLEECLCLGEFPLLKEFLIRNCPELKRALPQHLPSLQKLGVFDCNELEELLCLGEFPLLKVFSIRNCLELKRALPQHLPSLQKLGVFDCNELEASIPKSDNMIELDIQNCDRILVNELPTSLKKLLLRRNRYTEFSVHQNLINFPFLEALELNWSGSVKCPSLDLRCYNFLRDLSIKGWCSSSLPLELHLFTKLQSLYLYDCPELESLPMGGLPSNLIQLGIYNCPKLIGSREEWGLFQLNSLKCFTVADEFENVESFPEENLLPPTLEILQLYNCSKLRIMNKKSFLHLKSLNRLYILD* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0520 1196 SUPERFAMILY RNI-like 929 1194 - -
Mtr3g0520 1196 PANTHER DISEASE RESISTANCE PROTEIN RP 35 946 IPR044974 GO:0006952
Mtr3g0520 1196 Pfam NB-ARC domain 179 418 IPR002182 GO:0043531
Mtr3g0520 1196 SUPERFAMILY L domain-like 494 963 - -
Mtr3g0520 1196 Gene3D - 157 328 IPR027417 -
Mtr3g0520 1196 Coils Coil 35 59 - -
Mtr3g0520 1196 PRINTS Disease resistance protein signature 199 214 - -
Mtr3g0520 1196 PRINTS Disease resistance protein signature 271 285 - -
Mtr3g0520 1196 PRINTS Disease resistance protein signature 369 383 - -
Mtr3g0520 1196 PRINTS Disease resistance protein signature 784 800 - -
Mtr3g0520 1196 PANTHER OS05G0414200 PROTEIN 35 946 - -
Mtr3g0520 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 432 IPR027417 -
Mtr3g0520 1196 Gene3D Ribonuclease Inhibitor 972 1196 IPR032675 -
Mtr3g0520 1196 Pfam Rx N-terminal domain 16 98 IPR041118 -
Mtr3g0520 1196 Gene3D - 418 505 IPR036388 -
Mtr3g0520 1196 Gene3D Ribonuclease Inhibitor 695 880 IPR032675 -
Mtr3g0520 1196 Gene3D Ribonuclease Inhibitor 881 948 IPR032675 -
Mtr3g0520 1196 Gene3D Ribonuclease Inhibitor 538 688 IPR032675 -
Mtr3g0520 1196 Gene3D - 332 417 IPR042197 -
Mtr3g0520 1196 Gene3D - 14 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0520 Mtr-Chr3 6863307 6870323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0520 173 826 WRKY Transcription Factor Family AT5G45050 20.900 1.30e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0520 - - mtr:MTR_3g022600 2032.3