Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0514 ATGAGTCCTTCAGACGACATCCTTGTTCAAAAATACTTCTATGATCTGTGTCCTTTTTTGAAGTTTTCATACCTGATCACAAATCAACCAATTATCGAATCGATGGAATGTGAAAAGGTGGTTCATATTAGCGATCCCCATTGTTCTGAACCAGCGCAATGGATAAATCTTATACAAACTTTAAAGAAACGTCCGGGAGGTCCGCCCCATCTGAAAATTACAGGAATTCATGAAAAGAAAGAGGCTTTGGAGCAAATGAGCTTTCATTTGACAACCGAAGCAGGGATTTTGGATTTTCCTTTACAGTTCAATCCAATAATTAGCAAACTTGAAGATGTCGATTTCGAAAACTTGCCTGTCAAGACAGGAGATGCTGTTGCAATTTCTTCTGTTCTTCAGCTGCATTCTCTCCTTGCTACTGATGATGAAATGGTCTCCTCATCAGGTGCAGCATCTTTCAATATGCAGAGAGCAGCGCACTTGGGTCAGAGGACTTTTGCAGAGTGGCTAGAGAGAGACATGATCAATGCATATATCTTGAGTCCGGATTCAGCATTATCACCTCTTTTTTTAGGTGCTTCACCTAAGATGGGGATCTTTCTTAACGCTATGCGAAAACTACAACCAAAACTTTTAGTGATTACTGAACAGGAATCAAATCTGAATGGATGTAATTTAACGGAGAGAATCGACCGAGCATTGTACTTTTACGGTTCACTTTTTGACTGCTTGGAATCTACTGTTACGAGAACATCAGTCGAGAGACAAAAACTCGAGAGCATGCTTCTTGGAGAGCAAATAAAGAACATCATTACTTATGAGGGAGTCGATAGAAAGGAAAGGCATGAGAAGCTCGAGCAATGGATTCAAAGACTTAAAATGGCTGGATTTGTGAAGGTACCTTTGAGTTACAATGGGAGGATAGAAGCGACAAATCTATTGCAGCGATATAGTCATAAATACAAGTTTAAAGAAAATGATTGTTTACTTCTTTGTTGGAGTGACAGACCACTTTTTTCTGTATCGGCCTGGAAATTTAGGTGA 1044 0.3956 MSPSDDILVQKYFYDLCPFLKFSYLITNQPIIESMECEKVVHISDPHCSEPAQWINLIQTLKKRPGGPPHLKITGIHEKKEALEQMSFHLTTEAGILDFPLQFNPIISKLEDVDFENLPVKTGDAVAISSVLQLHSLLATDDEMVSSSGAASFNMQRAAHLGQRTFAEWLERDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLQPKLLVITEQESNLNGCNLTERIDRALYFYGSLFDCLESTVTRTSVERQKLESMLLGEQIKNIITYEGVDRKERHEKLEQWIQRLKMAGFVKVPLSYNGRIEATNLLQRYSHKYKFKENDCLLLCWSDRPLFSVSAWKFR* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0514 347 Pfam GRAS domain family 4 345 IPR005202 -
Mtr3g0514 347 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 346 IPR005202 -
Mtr3g0514 347 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 346 - -
Mtr3g0514 347 ProSiteProfiles GRAS family profile. 1 345 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0514 Mtr-Chr3 6713226 6714269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0514 4 347 GRAS Transcription Factor Family AT1G50420 49.718 4.31e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr3g0514 GRAS 1.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0514 - - gmx:100779726 582.022