Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0508 ATGTTAGAACCTCTCTTAGGAACAATCACCAATGTAACGTTCTTCTATATGATTTTGATATGGGTTTTATTCAATAGTTTGAAACTAAGCAAGCATAACAATAATCTACGTTTCAAACACAAACCAACCCTATTTGCTTCGATCACTGTTTTGTTCAATGGTGTTATGTCTATTTTGAACGTAGCTACTGTTTTCTATGATCATAGTTACACAACTAGTGGAGTCATAGGGTATAACCCTAACCCTATTTCATTGTCTTTTACTTGGGTTTTAGCAACATTGGTTTCATACTATTCAATGAAGAAAACACTTGGGGAGTGTAAAAGGTTTCCTATTGTTCTAATTCTTTGGTGGGTCTTTGCTACTATAATTGATATCATCTCATTGTCTTTAAAGCTAGTAAAAAATTCAGAATCCATGAACTTTAGGGTTTTTCTGCTGGAGAATATAGTTGGTGCAGTTTCTTTTCCTATTTTGTTACTTCTATGCATCAATGCACTTCCCAATGTGTGCACAAAGGAGCAAAGCGAAACCGAACAAAGGTTACTTGAAGAAGAGTTTGAATCTTCTACTTTGGGAGAAGAAGATGAAGAGGCTTTCACAAAAGCTAGTTTATGGAGTCTCCTCACATTCACTTGGTTGAATCCTATTTTTAAAATCGGTCGGATTCAGAAGCTTGAACATGTCCATGTTCCTTGTGTTCCTAACTCTGAAACTGCTGCTATTGCTTCTTCTATGTTGAAAGAATCTATTCACAATCAAACACTTAAAGGTGGTTCCTTGGCAAAAGCTATTATCTTCTTTATTTGGAAATCCATGGCCTTCAATGCAGTTTTAGCAGGAGTTAATACTATTGCATCCTATATTGGTCCATTGTTGATATCAAACTTCGTAAACTTTTTGTTATCCAAAAATGATAATTCAAGCAATCAATATGGACTGATTATTGCCTCCATTCTCTTCCTCTCAAAAACCGTGGAGTCATTGAGTCAGAGACAATTGTACTTTGGTGCTCAAAGAATTGGAATTCGAGTCCGTGCAGCTCTTATGGCCCAAGTTTATAGCAAGTCTCTATTAGTCAAGTGTCGTGTACCGGCAGATGGTAACATAACCAATTTGATTAACATAGATATCGATAGAGTTGGAGACTTCTGCAATCATATTCATGGAATTTGGCTGATTCCGGTTCAGACATTTTTGGCCTTGATCATCTTATGCATAAATCTAGGTTGGATACCATCTCTTGTTGCCTTTGCCGTCACAACTTTGGTTATGATGTGTAACACACCTTTGGCCATCATGCAAAAAGGTTTGCAGTCCAAAATCATGGAAGCCACAGATGCAAGAATGAAAATGACATCAGAGACCATCAAGAACATGGGAATTTTGAAGTTGCATTCATGGGAATTAACATTCATGCAGAAACTTCTCCGGTTTAGGGACACTGAAATGAGCTGGGTGAAAAAATTCCTCCATGCAAGTTCCGCAGTAGCCACTCTTTTTTGGACAACTCCAACTTTGGTTTCTGTTTTCACTTTTGGGGCATGTATATTGGTGAAGACTGAGCTAACTGCGGCAACAGTCCTCTCAGCTCTTGCAACATTCCGCATTCTACAAGAACCAATTTGCAATATGCCTGAGCTTATATCCATGATTACTCAAACCAAAGTATCAATTGATCGTATCCACAAGTTCATAGAAAAAGAGGATCAAAATCCATTCATTAATAGGCCTGCTTCCGAATCTTCAACAGTTTCTATTGAAATCAAGCCGGCAGAATATGCATGGGAAGCAACCGATCAAACCACCACCAAGAAAGCAACAATTACAATTAAAGAATCATTTATGATAAAGAAAGGTCACAAGGTAGCGATTTGTGGACCAGTAGGGTCGGGAAAATCAAGTTTACTTCTCAGTATGCTTGGTGAGATTCCATTGATTTCTGGGGAAGCAACCGAAGTGTATGGAACCAGAAGCTATGTGCCACAAAGTCCATGGATCCAATCAGGAACTGTGAGAGAAAACATACTCTTCGGAAACAAAATGGATACAATTTTATATGAAAATGTCCTGGATGGTTGTGCGTTGAACCATGATATCAAAATATGGAGGCCATACGGAGATTCAATCCCTGTGGAGGAGAGGGGCATTAACTTAAGTGGAGGGCAGAAACAACGAATTCAACTGGCAAGGGCGGTCTATAATAACTCGGATATTTATTTCCTTGACGATCCTTTTAGTGCTGTTGATGCTCACACCGGAAGTCATTTGTTTAAGGAATGTCTTGTGAAATTGTTGTGTGATAAAACAGTTGTTTATGCCACACATCAGATGGAATTTTTGGAAGCCGCAGACGTTATTTTGGTTATGAAAGATGGACAAATAGTGGAGTCGGGAAGCTATAGAGATCTCATAGCATGTCCTGATAGAAAACTTGTCCGACAAATGGCGGCTCATAAAGAAACAATAAAACAAATTCCATCCCTAGAAGAAGATGACACTGTTAGCTGCAGAAGCAGACCCTGCCCTAAAAATCTAATTGAAATTGATGAACAGAATGGTCAGGAGATCGCCAAGGATGAGAAGAGAACGAGAGAAGAGGAATCAATGACCGGTCGAGTAAAATGGAGTGTTTACTCAACCTTTGTCACATTGGCTTACAATGGAGCACTTGTTCCGGTTATTCTCCTATGTCAAATTCTCTTTCAAGCTATGCAGATGGGAAGCAACTATTGGATTTCTTGGGCTGCAGAACAAAGGGGAAGATTCAACAATGGGCGGCTTATTGGAATATTTACCCTTCTGTCTGGTGGGAGCTCCATCTTCATCTTGGGAAGGACTGTTTTAATGACAATAGTTTCGGTCGAAACAGCCAGACGCCTTTATCATGGAATGACCACATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAGTTTTGAGTAGGTCATCTACAGATCAAACAAGGGCAGATAGTGACATTCCATACAGATTAGCTGGACTAGTCTTTGCACTTATCCAGTTATTAAGTATCATTGCCTTAATGTCTCACGCCGCATGGCAAGTCCTTCTTGTCTTTTTTGCGGTTTTTGCCATCTCCATCTGGTATCAAGTGTATTATATCACTACAGCAAGGGAATTGGCCAGGATGGTAGGGATTCGAAAGACACCAATCTTGCATCACTTCTCGGAATCAATTGTTGGGGCTACCACAATCCGGTGTTTCAATCAAGAGAGAATATTCTTGACCAAGGCTATGTCTTTAATCGATGATTATTCTCGTGTAGCCTTTCACAACTATGCCACCATGGAATGGTTGTCTGTTAGAATTAATTTTCTCTTTAATTTGGTCTTCTATTTTGTTCTCGTCATCTTGGTTACTTTGCCGAGGTCTTCCATTGATCCGAGCTTAGCAGGTCTTGTAGCTACTTATGGTTTGAGCCTCAATGTACTTCAGGCTTGGGTGATATGGAACCTTTGTAACGTCGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCGACTATACCTTCTGAAGCACCACTAGTTATTCAAGATTGTAGGCCGACACCAGAGTGGCCTAGCGAAGGAAAAATCGAACTCAACAACCTGCATATACAATATGATCCTGCTGCTCCCATTGTTCTCAAAGGTGTCACTTGTGTCTTCCCAGGACATAAAAAAATTGGTATAGTAGGCCGGACAGGGAGTGGGAAATCTACTATGGTGCGAGCTCTCTTTCGAGCAGTGGAGCCTTTAAGAGGATGCATAGTTATCGATGGTGTAAATATTTCAAATATTGGCCTGCATGATTTAAGGTCCAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGACGAAGAGCTATGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAATTAGTACGACAAGATCCAAGGCTTCTCGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGCCTTGGACAGCGACAACTAGTTTGCCTTGCTAGATTATTGCTGAATAAAAGACGAATTTTGGTCCTAGATGAGGCAACTGCATCCATAGACACCGCAACTGATAGTTTAATTCAAAAGACTATCAGGGAAGAAACGAGTGATTGCACCGTCATTACAGTAGCACACAGAATTCCCACCGTCATTGATAACGATATGGTTCTAGTCCTTAACGAAGGTAGAATTTTGGAGTATGATAATCCAGCTCGATTGCTACGGGACCAATCTTCTTCGTTCTCAAAGCTGGTGTCAGAATATTCAAGGAGATCATCTCAAAGTTAA 4353 0.4013 MLEPLLGTITNVTFFYMILIWVLFNSLKLSKHNNNLRFKHKPTLFASITVLFNGVMSILNVATVFYDHSYTTSGVIGYNPNPISLSFTWVLATLVSYYSMKKTLGECKRFPIVLILWWVFATIIDIISLSLKLVKNSESMNFRVFLLENIVGAVSFPILLLLCINALPNVCTKEQSETEQRLLEEEFESSTLGEEDEEAFTKASLWSLLTFTWLNPIFKIGRIQKLEHVHVPCVPNSETAAIASSMLKESIHNQTLKGGSLAKAIIFFIWKSMAFNAVLAGVNTIASYIGPLLISNFVNFLLSKNDNSSNQYGLIIASILFLSKTVESLSQRQLYFGAQRIGIRVRAALMAQVYSKSLLVKCRVPADGNITNLINIDIDRVGDFCNHIHGIWLIPVQTFLALIILCINLGWIPSLVAFAVTTLVMMCNTPLAIMQKGLQSKIMEATDARMKMTSETIKNMGILKLHSWELTFMQKLLRFRDTEMSWVKKFLHASSAVATLFWTTPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPICNMPELISMITQTKVSIDRIHKFIEKEDQNPFINRPASESSTVSIEIKPAEYAWEATDQTTTKKATITIKESFMIKKGHKVAICGPVGSGKSSLLLSMLGEIPLISGEATEVYGTRSYVPQSPWIQSGTVRENILFGNKMDTILYENVLDGCALNHDIKIWRPYGDSIPVEERGINLSGGQKQRIQLARAVYNNSDIYFLDDPFSAVDAHTGSHLFKECLVKLLCDKTVVYATHQMEFLEAADVILVMKDGQIVESGSYRDLIACPDRKLVRQMAAHKETIKQIPSLEEDDTVSCRSRPCPKNLIEIDEQNGQEIAKDEKRTREEESMTGRVKWSVYSTFVTLAYNGALVPVILLCQILFQAMQMGSNYWISWAAEQRGRFNNGRLIGIFTLLSGGSSIFILGRTVLMTIVSVETARRLYHGMTTSVFRAPISFFDNTPSSRVLSRSSTDQTRADSDIPYRLAGLVFALIQLLSIIALMSHAAWQVLLVFFAVFAISIWYQVYYITTARELARMVGIRKTPILHHFSESIVGATTIRCFNQERIFLTKAMSLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSSIDPSLAGLVATYGLSLNVLQAWVIWNLCNVENKMISVERILQFSTIPSEAPLVIQDCRPTPEWPSEGKIELNNLHIQYDPAAPIVLKGVTCVFPGHKKIGIVGRTGSGKSTMVRALFRAVEPLRGCIVIDGVNISNIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAELVRQDPRLLDAPVAENGENWSLGQRQLVCLARLLLNKRRILVLDEATASIDTATDSLIQKTIREETSDCTVITVAHRIPTVIDNDMVLVLNEGRILEYDNPARLLRDQSSSFSKLVSEYSRRSSQS* 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0508 1450 CDD ABCC_MRP_domain2 1205 1425 - -
Mtr3g0508 1450 PANTHER OS01G0902100 PROTEIN 111 1449 - -
Mtr3g0508 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1198 1432 IPR027417 -
Mtr3g0508 1450 SUPERFAMILY ABC transporter transmembrane region 894 1187 IPR036640 GO:0005524|GO:0016021
Mtr3g0508 1450 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 111 1449 - -
Mtr3g0508 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1207 1441 IPR003439 GO:0005524
Mtr3g0508 1450 Pfam ABC transporter transmembrane region 898 1137 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0508 1450 Pfam ABC transporter transmembrane region 276 541 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0508 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 807 IPR027417 -
Mtr3g0508 1450 Gene3D - 1190 1443 IPR027417 -
Mtr3g0508 1450 CDD ABCC_MRP_domain1 587 794 - -
Mtr3g0508 1450 CDD ABC_6TM_ABCC_D2 892 1182 IPR044726 GO:0140359
Mtr3g0508 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 817 IPR003439 GO:0005524
Mtr3g0508 1450 SMART AAA_5 619 794 IPR003593 -
Mtr3g0508 1450 SMART AAA_5 1233 1426 IPR003593 -
Mtr3g0508 1450 CDD ABC_6TM_ABCC_D1 275 562 IPR044746 GO:0140359
Mtr3g0508 1450 Gene3D ABC transporter type 1, transmembrane domain 247 572 IPR036640 GO:0005524|GO:0016021
Mtr3g0508 1450 SUPERFAMILY ABC transporter transmembrane region 268 573 IPR036640 GO:0005524|GO:0016021
Mtr3g0508 1450 Pfam ABC transporter 1224 1372 IPR003439 GO:0005524
Mtr3g0508 1450 Pfam ABC transporter 614 746 IPR003439 GO:0005524
Mtr3g0508 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 894 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0508 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 277 554 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0508 1450 Gene3D - 601 837 IPR027417 -
Mtr3g0508 1450 Gene3D ABC transporter type 1, transmembrane domain 855 1188 IPR036640 GO:0005524|GO:0016021
Mtr3g0508 1450 ProSitePatterns ABC transporters family signature. 719 733 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0508 Mtr-Chr3 6637781 6643641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0508 614 826 Calmodulin-binding Proteins AT2G36910 31.602 2.33e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0508 - - gmx:100809063 2024.21