Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0504 ATGTTACCAACATGCATTGTAAACTCAAAAACTAAAAGAAACCAAAACATGGGATCTATTTCTGAAGATATTCATGTTCTTCCAAAATGTTCACCTTTTGAAGTAGTAGAAGATGATGATGCATGTCTCTCTGCTATGCTTCTTTGTTGTGGTCCAATGATTTATACTTCTGTGTTAAAATCTGCAATTGAATTAAACCTATTTGATATTATATCAAAGGCAAATCCACCAGGTGTTTCAGCATCCTATGTTGCTTCAAAGTTACAAACAACACAACATCCTCAATTACCTCGAAGGCTCGATCGAATGTTGTGTCTGCTTGCAAGTCACTCTCTTCTTATTTGCTCTACAAGAACAAATGAAGAAGGTGTGATTGAAAGAGTTTATGAATTGTCATTGGTTGGTAAATATTTTGTCAATGATGAGAAGAATGGTTCTGTTGCTTTGTTCTCAACGTTTATGAGTCACCAAAAGCTTGTGGATGCATTCAACAATTTTAAAGAGGTACTTTCAGACTGTGATAATGGACTATACATGAAAGTTCATGGAATGCCAGTTTATCAAGGCATACAATCTGACCCAGCTTGGAATAATGTGTTTAACAAAGCAATGGCTAATATTTGCACAATTGAAATGAAGAAGATATTAGAAAAATACAAAGGATTTGAAGGAATATCAATATTGGTTGATGTTGGAGGAGGAATTGGGCAAAGTTTGAATATGATAATCTCTAAGTATCCTTCTATAAAGGGCATTAATTTTGATTTGCCCCAAGTTATACAACATGCTCCAATTTATCCAGGAATTGAGCAAATTGAAGGAGACATGTTTAAAAGTGTCCCAACAGGTGATGCCATAATATTGAAGGCTATATTGCATAACTGGTCTGATGAAAACTGTTTGAAAGTTCTAACTAAGTGCTACAAAGCTTTGCCACAACATGGGAAAGTGATTGTTGTGGACTTCATTATGCCTCAAGAAATTCAGCATACAAAAGCAGATAAGATGATAACTAGCTTTGACAACCTCATGTTCTTGGATAGTGGTGTTGAAAGAACAGAGAAAGAATTTGAAAAGTTATGCAAATGTTCTGGATTTTCTAGTTTTGAGGTTGTTTGTCTTGCCTTTTCTGCCCTAGGAGTGATGGAATTTTCTAAATAA 1161 0.348 MLPTCIVNSKTKRNQNMGSISEDIHVLPKCSPFEVVEDDDACLSAMLLCCGPMIYTSVLKSAIELNLFDIISKANPPGVSASYVASKLQTTQHPQLPRRLDRMLCLLASHSLLICSTRTNEEGVIERVYELSLVGKYFVNDEKNGSVALFSTFMSHQKLVDAFNNFKEVLSDCDNGLYMKVHGMPVYQGIQSDPAWNNVFNKAMANICTIEMKKILEKYKGFEGISILVDVGGGIGQSLNMIISKYPSIKGINFDLPQVIQHAPIYPGIEQIEGDMFKSVPTGDAIILKAILHNWSDENCLKVLTKCYKALPQHGKVIVVDFIMPQEIQHTKADKMITSFDNLMFLDSGVERTEKEFEKLCKCSGFSSFEVVCLAFSALGVMEFSK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0504 386 Gene3D - 54 215 IPR036388 -
Mtr3g0504 386 Pfam Dimerisation domain 58 108 IPR012967 GO:0046983
Mtr3g0504 386 Gene3D Vaccinia Virus protein VP39 197 374 IPR029063 -
Mtr3g0504 386 PANTHER O-METHYLTRANSFERASE 17 386 IPR016461 GO:0008168
Mtr3g0504 386 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 47 386 IPR016461 GO:0008168
Mtr3g0504 386 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 17 386 - -
Mtr3g0504 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 381 IPR029063 -
Mtr3g0504 386 PIRSF O-mtase 29 386 IPR016461 GO:0008168
Mtr3g0504 386 Pfam O-methyltransferase domain 167 367 IPR001077 GO:0008171
Mtr3g0504 386 SUPERFAMILY "Winged helix" DNA-binding domain 37 141 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0504 Mtr-Chr3 6574148 6578424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0504 17 377 Monolignol Biosynthesis Gene Families AT5G54160 45.879 5.04e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0504 - - cam:101492092 645.195