Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0501 ATGGCATTTCTTTCCCCTATCATCCAAGAGATTTGTGAGAGGTTATCTTCAACAGATTTCGGAGGCTACGTCCGTGAAGAGCTGGGGAAAAAACTTGAAATCACACTGGTTTCTATCAATCAAGTGCTGGATGACGCAGAGACAAAGAAGTACGAGAATCAAAACGTGAAGAATTGGGTTGATGATGCGAGTAATGAGGTATACGAATTAGATCAACTGTTGGACATCATTGCTAGTGACTCTGCAAATCAAAAGGGAAAGATACAACGCTTTCTTTCAGGTTCTATCAATCGGTTTGAATCTAGGATTAAAGTATTGCTCAAGAGGCTCGTAGGTTTTGCAGAGCAAACGGAAAGATTGGGACTTCATGAAGGTGGAGCCAGCAGATTTTCAGCTGCATCTTTGGGGCATGAATATGTCATATATGGTAGAGAGCATGAGCAAGAGGAAATGATTGATTTTTTACTTTCAGATAGTCACGGTGAGAACCAGCTACCCATAATCAGTATAGTGGGTCTGACGGGGATTGGTAAGACAGCCCTTGCCCAGCTTGTTTACAATGACCATAGGATACAGGAGCAGTTTGAATTTAAAGCTTGGGTCCATGTTTCAGAAACTTTTAATTATGATCATCTCATCAAATCAATTCTCAGGTCAATTTCTTCAGCAGAAGTAGGTGATGAAGGCACGGAAATACTCAACAGTCAATTGCAACAGCAGCTAGCAGGGAAGAAATATTTGCTTGTTCTAGATGATGTCGGGATAAAAAATGGAAATATGCTGGAGCATTTACTACTTCCTCTTAACCGTGGATCTTCTCGAGGTAAGATGATCGTGACAACACATGACAGTGAGGTAGCGTTAGTTATGAGATCCACACGACTACTTCATTTAAAGCAATTGGAGGAGAGTGACTCTTGGAGTTTATTTGTGAGATATGCTTTTCAAGGCAAGAATGTGTTTGAATATCCAAATCTTGAATTGATTGGCAAGAAAATAGTAGCAAAATGTGGGGGGTTGCCTTTAACTCTGAAAACATTGGGGATTCTCTTCCAAAGAAAATTCTCTGTAACTGAATGGGTTGAGATATTGGAGACTGATTTGTGGTGTTTACCCGAGGGTGACAACTGCATTAATTTTGCTCTGAGGATGCATTACCTTAGCCTCCCTCCCAATCTGAAGCGTTGTTTTGCTTGTTGGTCTAATCTTCCCAAGGGTTATGAGTTTGAGGAGGGTGAATTAATCAGGCTTTGGATGGCAGAAGGTTTGTTAAATTGTTGCGGAAGAAACAAAAGCAAAGAAGAGTTAGGGAATGAATTCTTCGATCAACTAGTGTCAATGTCATTTTTCCAACAATCAGTATTGATGCCATTATGGACCGGTAAGTGCTACTTTATCATGCATGATCTTGTCAATGATTTAGCGAAATCAGTGTCAGGAGAGTTCCGATTGCGAATACGAATAGAGGGTGATAACATGAAAGATATACCTAAAAGGACACGTCACGTATGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAGAGAATGTTAAAAAAATCAAGGGACTACACAGTCTGATGGTAGAAGCACAAGGCTATGGTGACCAACGCTTTAAGGTACGCACCGATGTGCAGCTTAATTTGTTTTTAAGACTAAAATATTTGCGAATGTTGTCTTTCTCGGGTTGCAATCTCTTAGAGCTAGCTGATGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCTTACACAGAGATTACAAGCTTACCTAATTCCATTTGTAAGCTGTATAGTTTGCATACCCTCTTACTGGAAGAATGTTTTAAATTGACTGAGCTCCCATCAAATTTTTGCAAACTCGTCAATTTACGTCATCTTAATTTGAAAGGCACACATATTAAGAAGATGCCAAAGGAGATGAGAGGGTTAATAAACCTTGAGATGCTGACCGATTTTGTTGTGGGAGAGCAACATGGATTTGATATTAAGCAGTTGGCAGAACTCAACCACCTTAAAGGAAGGCTTCAAATTTCAGGGTTGAAAAATGTGGCTGATCCAGCAGATGCTATGGCAGCAAATTTGAAACATAAGAAACATTTAGAAGAATTAAGTTTGTCGTATGATGAATGGAGAGAAATGGATGGCTCAGTAACTGAAGCATGTTTCTCGGTCTTGGAGGCTCTGCGACCAAATAGAAATCTCACGAGGCTCAGCATCAATGACTACAGAGGTAGTAGCTTTCCTAATTGGCTTGGGGATCATCATCATCTAGCCAATTTATTATCTCTTGAATTGTTGGGATGTACACACTGTTCCCAGTTGCCACCACTTGGGCAGTTCCCTTCTCTCAAGAAGCTTTCCATTTCAGGCTGTCATGGAGTAGAGATCATTGGTTCAGAGTTTTGCCGCTATAATTCAGCAAATGTTCCATTTAGATCCCTTGAAACTTTGTGTTTCAAGAACATGTCTGAATGGAAGGAATGGTTATGTCTTGATGGTTTCCCTTTAGTTAAAGAGCTTTCTCTAAATCATTGTCCCAAATTGAAAAGTACCCTGCCTTATCACCTCCCTTCTTTGCTAAAATTGGAGATTATTGATTGCCAAGAGTTGGAGGCTTCAATTCCTAATGCTGCTAATATCAGTGATATAGAGCTAAAGAGATGTGATGGCATTTTTATAAATAAATTGCCATCAAGCTTGGAAAGGGCCATCCTTTGTGGAACTCATGTCATTGAAACCACCCTAGAGAAAATTCTAGTTAGCAGTGCCTTTCTTGAAGAACTGGAAGTTGAAGACTTCTTTGGTCCAAATCTAGAATGGTCCTCTTTGAATATGTGTAGCTGTAATTCCCTTCGCACTTTAACTATAACAGGTGCTGCTAAAAGAAGAAGAGAAGTTGGCAGCCCAGCAGGCTGA 2928 0.4003 MAFLSPIIQEICERLSSTDFGGYVREELGKKLEITLVSINQVLDDAETKKYENQNVKNWVDDASNEVYELDQLLDIIASDSANQKGKIQRFLSGSINRFESRIKVLLKRLVGFAEQTERLGLHEGGASRFSAASLGHEYVIYGREHEQEEMIDFLLSDSHGENQLPIISIVGLTGIGKTALAQLVYNDHRIQEQFEFKAWVHVSETFNYDHLIKSILRSISSAEVGDEGTEILNSQLQQQLAGKKYLLVLDDVGIKNGNMLEHLLLPLNRGSSRGKMIVTTHDSEVALVMRSTRLLHLKQLEESDSWSLFVRYAFQGKNVFEYPNLELIGKKIVAKCGGLPLTLKTLGILFQRKFSVTEWVEILETDLWCLPEGDNCINFALRMHYLSLPPNLKRCFACWSNLPKGYEFEEGELIRLWMAEGLLNCCGRNKSKEELGNEFFDQLVSMSFFQQSVLMPLWTGKCYFIMHDLVNDLAKSVSGEFRLRIRIEGDNMKDIPKRTRHVWCCLDLEDGDRKLENVKKIKGLHSLMVEAQGYGDQRFKVRTDVQLNLFLRLKYLRMLSFSGCNLLELADEIRNLKLLRYLDLSYTEITSLPNSICKLYSLHTLLLEECFKLTELPSNFCKLVNLRHLNLKGTHIKKMPKEMRGLINLEMLTDFVVGEQHGFDIKQLAELNHLKGRLQISGLKNVADPADAMAANLKHKKHLEELSLSYDEWREMDGSVTEACFSVLEALRPNRNLTRLSINDYRGSSFPNWLGDHHHLANLLSLELLGCTHCSQLPPLGQFPSLKKLSISGCHGVEIIGSEFCRYNSANVPFRSLETLCFKNMSEWKEWLCLDGFPLVKELSLNHCPKLKSTLPYHLPSLLKLEIIDCQELEASIPNAANISDIELKRCDGIFINKLPSSLERAILCGTHVIETTLEKILVSSAFLEELEVEDFFGPNLEWSSLNMCSCNSLRTLTITGAAKRRREVGSPAG* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0501 975 SUPERFAMILY L domain-like 467 874 - -
Mtr3g0501 975 Gene3D - 21 110 - -
Mtr3g0501 975 Gene3D - 300 381 IPR042197 -
Mtr3g0501 975 Pfam Rx N-terminal domain 4 86 IPR041118 -
Mtr3g0501 975 Gene3D Ribonuclease Inhibitor 516 967 IPR032675 -
Mtr3g0501 975 SMART LRR_typ_2 577 600 IPR003591 -
Mtr3g0501 975 SMART LRR_typ_2 624 647 IPR003591 -
Mtr3g0501 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 398 IPR027417 -
Mtr3g0501 975 PANTHER OS05G0414200 PROTEIN 25 868 - -
Mtr3g0501 975 Gene3D - 127 295 IPR027417 -
Mtr3g0501 975 PRINTS Disease resistance protein signature 167 182 - -
Mtr3g0501 975 PRINTS Disease resistance protein signature 240 254 - -
Mtr3g0501 975 PRINTS Disease resistance protein signature 337 351 - -
Mtr3g0501 975 PRINTS Disease resistance protein signature 575 591 - -
Mtr3g0501 975 Pfam NB-ARC domain 145 365 IPR002182 GO:0043531
Mtr3g0501 975 PANTHER DISEASE RESISTANCE PROTEIN RP 25 868 IPR044974 GO:0006952
Mtr3g0501 975 Gene3D - 382 478 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0501 Mtr-Chr3 6554408 6560028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0501 141 801 WRKY Transcription Factor Family AT5G45050 24.268 1.06e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0501 - - mtr:MTR_3g021170 1442.56