Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0499 ATGGCAGAGGTTGTTGTTCGTCGGGCATTTCTTTCCCCCGTCATTCAATTGATTTGTGAGAGATTAGCTTCAACAGATTTCAGTGACTACCTCCATGAAAAGCTTGTGAAAAAACTTGAAATCACATTGGTTTCTATCAATCAAGTGCTGGATGACGCAGAGACAAAGAAGTACGAGAATCAAAACGTGAAGAATTGGGTTGATGATGCGAGTAATGAGGTATACGAATTAGATCAACTATTGGACATCATTGCTAGTGACGCTGCAAAACAAAAGGGAAAGATACAACGCTTTCTTTCAGGTTCTATCAATCGATTTGAATCTAGGATTAAAGTATTGCTCAAGAGGCTAGAGTTTCTTGCAGATCAAAAGAATATATTGGGACTTCACGAATTAAGTCGTTATTATTATGAAGATGGAGCCAGCAGATTTTCAACTGCATCTTTGGTGGCTGAATCTGTGATATATGGTAGAGAGCATGAGAAAGAAGAAATAATTGAATTTTTACTTTCAGACAGTCACGGTTACAACCGGGTATCCATAATCAGTATAGTGGGTCTGGACGGGATAGGTAAGACAACCCTTGCGCAGCTTGTTTACAATGACCACATGACGAGGGATCAATTTGAAGTTATAGGATGGATCCATGTTTCAGAATCTTTTAATTATCGTCATCTCATCAAATCAGTTCTCAAGTCAATTTCTTTATCAACATTATATGATGACGACAAGGAAATACTTAAACGTCAATTGCAACAGCGGCTAGCAGGGAAGAAATATTTGCTTGTTCTAGATGATGTATGGATCAAACATTGCAATATGCTGGAGCGGTTACTACTTATTTTTAACCAGGAACCTTCTCGAGGGAGGATGATAGTGACAACACATGATAAAGAAGTTGCATCAGTCATGAGATACACCCAGATACTTCATTTAAGGCAATTGGAGGAGAGTGACTCTTGGAGTTTATTTGTAAGACATGCTTTTGAAGGCAGGAATATGTTTGAATATCCAAATCTTGAATCGATTGGTATGAAAATAGTAGAAAAATGTGGGGGGTCGCCTTTAGCTCTGAAAACATTGGGGATTCTCTTGCAAAGAAGATTCTCTGAAAATGAATGGGTTAAGATATTAGAGACTGATTTGTGGCGTTTACCTGAGAGTGACAGCAACATTTATTCCGTTCTAAGAATGAGTTACCTTAACCTCCCTTCCAATCTGAAGCATTGTTTTGCTTATTGTTCTATATTTCCCAAGGGTTATGAGTTTGAAAAGGATGGATTAATCAAACTTTGGATGGCAGAAGGTTTGATAAAGGGAATAGCCAAAGATGAAGAAGAGTTGGGTAATAAATTCTTCAATGATCTAGTGTCAATGTCGTTTTTCCAACAATCAGCAATTATGCCATTCTGGGCTGGTAAGTACAATTTCATCATGCATGATCTTGTCCATGATTTAGCGACATCAATGTCAGGAGAATTCTGCTTACGAATAGAGGGTGTGAAAGTGCAAGATATCCCTCAAAGGACACGTCACATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAAAGCAGATTCATAACATTAAAGGAGTACGGAGTCTGATGGTAGAAGCACAAGGCTATGGTGATAAACGCTTTAAGATATCCACCAATGTGCAGTATAATTTGTATTCAAGAGTACAATATTTACGGAAGTTATCTTTCAATGGTTGCAATCTCTCAGAGCTAGCTGATGAGATAAGAAACTTAAAGCTTCTGCGCTATCTAGACCTTTCTTACACCGAGATTACAAGCTTACCTAATTCCATTTGTATGTTGTATAATTTGCATACGCTCTTACTGGAAGAATGTTTTAAACTACTTGAGCTCCCGCCAAATTTTTGCAAACTCATCAATTTACGTCATCTTAATTTGAAAGGCACCCATATTAAGAAGATGCCAAAGGAGATGAGAGGGTTAATCAACCTTGAGATGCTGACTGATTTTATTGTGGGAGAGCAGCGTGGATTTGATATTAAGCAGTTGGCAGAACTCAACCACCTTAGAGGAAGACTTCGAATTTCAGGGTTGAAAAATGTGGCTGATCCAGCAGATGCTATGGCAGCAAATTTGAAAGATAAGAAACATTTAGAAGAATTAAGTTTGTCGTACGATGAATGGAGAGAAATAGATGACTCAGAAACTGAAGCACATGTCTCTATCTTGGAGGCTCTTCAACCAAATAGTAACCTCGTGAGGCTCACCATCAATGACTACAGAGGTAGTAGCTTTCCAAATTGGCTTGGGGATCATCATTTGTTGGGATGTAAACTCTGTTCCAAGTTGCCACAAATTAAGCAGTTCCCATCTCTCAAGAAGCTTTCCATTTCAGGCTGTCATGGAATAGGTATCATTGGTTCAGAGTTTTGCCGCTATAATTCATCAAATTTTACATTTAGATCCCTTGAAACTTTGCGGTTTGAGAATATGTCTGAATGGAAAGATTGGTTATGTATTGAAGGTTTCCCTTTGCTGAAAGAGCTTTCAATAAGATACTGTCCCAAGTTGAAAAGGAAACTGCCTCAACATCTTCCTTGCTTGCAAAAATTGGAGATAATTGATTGCCAAGATTTGGAGGCTTCAATTCCCATTGCTTATAATATCATTCAGCTAGAACTAAAGAGATGTGATGGCATTTTGATAAATAAATTGTCATCCAACTTGAAAAAGGTCATCCTTTGTGGAACTCAGATCATTGAATCCGCCCTAGAGAAAATTCTATTTAACAGTACCTTTCTTGAAGAATTGGAAGTTGAAGACTTCTTTGGTCAAAATCTAGAATGGTCCTCTTTGGATATGCGTAGCTGTAATTCTCTTCGCACTTTAACCATAACAAGTTGGCACTCTTCCTCCTTGCCTTTTGCACTACACTTGTTCACCAATCTTAATTCTCTCGTGTTGTACGATTGTCCATTGCTGGAATCATTTTTCGGGAGGCAGTTGCCTTCCAACCTAGGCAGCCTCCGAATAGAAAGATGCCCTAATTTGATGGCTTCAATAGAGGAGTGGGGTTTGTTCCAACTCAAATCTCTGAAACAATTCAGTCTTAGTGATGATTTTGAAATCTTCGAGTCCTTTCCAGAGGAGAGTATGCTGCCATCAAGTATTAACTCTCTTGATTTGAAAAATTGTTCCTGCCTAAGAAAAATAAACTGCAAGGGTCTTCTCCACCTCACTTCACTTGAATCTCTATATATTGAAGATTGCCCTTGTCTTGAGAGCTTGCCAGAGGAGGGTCTACCTATCTCTCTTTCTACTTTGTCAATTCATGACTGTCCATTACTTAAGCAGTTGTACCAAAAGGAGCAAGGAGAGCGTTGGCATACAATTTGTCACATCCCTAACGTGACAATTTCCTGA 3411 0.3861 MAEVVVRRAFLSPVIQLICERLASTDFSDYLHEKLVKKLEITLVSINQVLDDAETKKYENQNVKNWVDDASNEVYELDQLLDIIASDAAKQKGKIQRFLSGSINRFESRIKVLLKRLEFLADQKNILGLHELSRYYYEDGASRFSTASLVAESVIYGREHEKEEIIEFLLSDSHGYNRVSIISIVGLDGIGKTTLAQLVYNDHMTRDQFEVIGWIHVSESFNYRHLIKSVLKSISLSTLYDDDKEILKRQLQQRLAGKKYLLVLDDVWIKHCNMLERLLLIFNQEPSRGRMIVTTHDKEVASVMRYTQILHLRQLEESDSWSLFVRHAFEGRNMFEYPNLESIGMKIVEKCGGSPLALKTLGILLQRRFSENEWVKILETDLWRLPESDSNIYSVLRMSYLNLPSNLKHCFAYCSIFPKGYEFEKDGLIKLWMAEGLIKGIAKDEEELGNKFFNDLVSMSFFQQSAIMPFWAGKYNFIMHDLVHDLATSMSGEFCLRIEGVKVQDIPQRTRHIWCCLDLEDGDRKLKQIHNIKGVRSLMVEAQGYGDKRFKISTNVQYNLYSRVQYLRKLSFNGCNLSELADEIRNLKLLRYLDLSYTEITSLPNSICMLYNLHTLLLEECFKLLELPPNFCKLINLRHLNLKGTHIKKMPKEMRGLINLEMLTDFIVGEQRGFDIKQLAELNHLRGRLRISGLKNVADPADAMAANLKDKKHLEELSLSYDEWREIDDSETEAHVSILEALQPNSNLVRLTINDYRGSSFPNWLGDHHLLGCKLCSKLPQIKQFPSLKKLSISGCHGIGIIGSEFCRYNSSNFTFRSLETLRFENMSEWKDWLCIEGFPLLKELSIRYCPKLKRKLPQHLPCLQKLEIIDCQDLEASIPIAYNIIQLELKRCDGILINKLSSNLKKVILCGTQIIESALEKILFNSTFLEELEVEDFFGQNLEWSSLDMRSCNSLRTLTITSWHSSSLPFALHLFTNLNSLVLYDCPLLESFFGRQLPSNLGSLRIERCPNLMASIEEWGLFQLKSLKQFSLSDDFEIFESFPEESMLPSSINSLDLKNCSCLRKINCKGLLHLTSLESLYIEDCPCLESLPEEGLPISLSTLSIHDCPLLKQLYQKEQGERWHTICHIPNVTIS* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0499 1136 Gene3D Ribonuclease Inhibitor 946 1134 IPR032675 -
Mtr3g0499 1136 PANTHER DISEASE RESISTANCE PROTEIN RP 27 953 IPR044974 GO:0006952
Mtr3g0499 1136 Gene3D - 314 399 IPR042197 -
Mtr3g0499 1136 Pfam NB-ARC domain 159 400 IPR002182 GO:0043531
Mtr3g0499 1136 Gene3D - 139 310 IPR027417 -
Mtr3g0499 1136 Coils Coil 36 56 - -
Mtr3g0499 1136 SUPERFAMILY L domain-like 479 875 - -
Mtr3g0499 1136 Coils Coil 103 123 - -
Mtr3g0499 1136 Gene3D Ribonuclease Inhibitor 524 894 IPR032675 -
Mtr3g0499 1136 Pfam Rx N-terminal domain 10 95 IPR041118 -
Mtr3g0499 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 414 IPR027417 -
Mtr3g0499 1136 Gene3D - 400 490 IPR036388 -
Mtr3g0499 1136 PANTHER OS05G0414200 PROTEIN 27 953 - -
Mtr3g0499 1136 ProSiteProfiles Leucine-rich repeat profile. 589 610 IPR001611 GO:0005515
Mtr3g0499 1136 Gene3D - 30 118 - -
Mtr3g0499 1136 SUPERFAMILY RNI-like 782 1108 - -
Mtr3g0499 1136 PRINTS Disease resistance protein signature 181 196 - -
Mtr3g0499 1136 PRINTS Disease resistance protein signature 254 268 - -
Mtr3g0499 1136 PRINTS Disease resistance protein signature 351 365 - -
Mtr3g0499 1136 PRINTS Disease resistance protein signature 585 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0499 Mtr-Chr3 6534042 6540787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0499 179 802 WRKY Transcription Factor Family AT5G45050 24.012 2.46e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0499 - - mtr:MTR_3g021170 1828.53