Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0489 ATGGTTCAAAGAAAGGTTTCAAGCAAGCTTGGTATCCAAGTTGAACATGTTAAATCAGATAAACGTTTAGCAAACATGAAACTATCTTCTTCTTCTTCATCTCATCAACACCAAGATGGAAAAACTAAAGTTTCTGATATAAAGAAGAAAATGAAGAAATCAAAGTCAATCAAGCTTTCTGATCTTGAGGCTCTTCAATCTTCACCTTCATCGGTTCCGAGTTCGACAAAAGCAGCACCTGCCTCACCACAAAAACAGCATCCCTTGGTGAGAACAACTCCAGATGGTTCACCAAATTACATGAAGCCAACAAGCAGTTCACATGCAAAGAAGGAACTTTTCTCTGTAAGTCTTAGAAAAACTCAATCTGGTTCTGATTTTAATAGAAAATATTCAAGTGATTCAAAAGCTTTATGTAAAAAGCCTACAAAAGCTTTGATAAGATCAAGTAGTTTGAGTTTGGTTAGAACATTGACAAAGACTACTAGCTTTAAGGCTTCTAGAACTTCTTGTCCTAGAAAATCAACAAGAGCTACTTGCTCTTCAACTTTGAAAGATTCAAGCTTTCCGTCATACCTTATGCTTAATCATGGTGGAACTGAGTTAGAAGGAACTTCAGTTATGAAGGTTTGTTCATATACTTATTGTTCTCTTAATGGTCATCATCATCATGCTGATTTGCCTCCTTTGAAGACTTTTATGTCTTCGAGGAGGCGCGTCTTAAAGCGCGTGAAGCTCGAAGCTCTTAGCCCTCGTAGTCGAAGATTGAAGGCTACTGGTGAGACAGAAATGAAGGACTCTGATGTTGAGAAGAGTGCCTTTGATTCAAAACCTTCATATGATGAAACTGCCATGGATTTCTTCATTGAAATCTATGATAATGAGAAAAAGGATGCAGAATCAACAGGTGAAGAAGTAATTGGAAAAATCGATTTTCTCGAAGAGGTTGAGGATCATGAAGATATCATCAAGTCTACAATTGAAAATGATGGCATAGAAGTGGGATTTATGAAAGAGGTTGAAGATCTAAAGAAAAATGAAGATGTAGAGGAAGATCAACAAACTAGTTGGTCTCATGAAGAAATGAGTTTGGAAGATGTTCACAATAACACGGATGATTCTGATTCAGGATCCGAAGATATGCAGTGTGATGAAGAACAATATTACGTATATGATCATGAAAATTATGCTGATTCTTCTGTTTACACAGATGAAGAAAATGACTCAAAAGCTGAATCCTTATCTGAGAGTTCTCATGATGTATCAGTTACATGGTTAGATGATATCCTTAGCTGCTACTATGATGACATTATTCTTGTTGATGAAACACTCAAAGAAGCCAAATCAGAAGAAATCATATATCTTGAAGATCAACCTCATAATGACATGATCAATTTTGTCTTTGAAGGCAAAATTGGAAGCAACGAGACTCAAGAAATTGGTTACTCCTATGATGACATCGGTTGCGACCAATCTTCACTGGCAAATGAAATATTTGATTACCTGACAAATGCCGAAGAAAACGTTGACGAGACAAGCCAAGAGAACGAAGATGATAACATCAATATAGAGGAGAAGGATGAAATTCAATTATTTGATGTGCTTGAAGGAAGCATCAAAGATATTCAAGATCAATGCAAAGGTAATAAAAGAGCAAGTTGCATAATTGACGAAGACGAAGACACAAGAGGGAATCGGAAAGGTGTGATTAGGAGAAAGAGGAATGATGAAGATGACGATGAATTGAGGAATTTCAATCCAAGAGAGCCGAATTTCCTTCCATTGGTACCTGAGAAAGAAAAGGAAAAGGTTGATTTGAGGCATCAAATGATGGATGAAAGAAAGAATGCAGAGGATTGGATGGTTGATTGTGCACTAAGGCAAGCTGTGAACAAGCTTGCTCCTGCTAGAAAGAAGAAAGTGGCATTGCTAGTTGAAGCCTTTGAAACTGTAATACCAAAATGTGAGTCACATTTGAGAAACAGATCAGGGTTTTCTCATGGAAGACACATTCAAGCTTGTAGCTGA 2028 0.3703 MVQRKVSSKLGIQVEHVKSDKRLANMKLSSSSSSHQHQDGKTKVSDIKKKMKKSKSIKLSDLEALQSSPSSVPSSTKAAPASPQKQHPLVRTTPDGSPNYMKPTSSSHAKKELFSVSLRKTQSGSDFNRKYSSDSKALCKKPTKALIRSSSLSLVRTLTKTTSFKASRTSCPRKSTRATCSSTLKDSSFPSYLMLNHGGTELEGTSVMKVCSYTYCSLNGHHHHADLPPLKTFMSSRRRVLKRVKLEALSPRSRRLKATGETEMKDSDVEKSAFDSKPSYDETAMDFFIEIYDNEKKDAESTGEEVIGKIDFLEEVEDHEDIIKSTIENDGIEVGFMKEVEDLKKNEDVEEDQQTSWSHEEMSLEDVHNNTDDSDSGSEDMQCDEEQYYVYDHENYADSSVYTDEENDSKAESLSESSHDVSVTWLDDILSCYYDDIILVDETLKEAKSEEIIYLEDQPHNDMINFVFEGKIGSNETQEIGYSYDDIGCDQSSLANEIFDYLTNAEENVDETSQENEDDNINIEEKDEIQLFDVLEGSIKDIQDQCKGNKRASCIIDEDEDTRGNRKGVIRRKRNDEDDDELRNFNPREPNFLPLVPEKEKEKVDLRHQMMDERKNAEDWMVDCALRQAVNKLAPARKKKVALLVEAFETVIPKCESHLRNRSGFSHGRHIQACS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0489 675 MobiDBLite consensus disorder prediction 567 590 - -
Mtr3g0489 675 MobiDBLite consensus disorder prediction 24 38 - -
Mtr3g0489 675 MobiDBLite consensus disorder prediction 344 381 - -
Mtr3g0489 675 MobiDBLite consensus disorder prediction 1 115 - -
Mtr3g0489 675 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 527 IPR044681 GO:0005516
Mtr3g0489 675 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 515 675 IPR044681 GO:0005516
Mtr3g0489 675 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 515 675 - -
Mtr3g0489 675 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 527 - -
Mtr3g0489 675 Coils Coil 502 522 - -
Mtr3g0489 675 SMART CaM_binding_2 544 653 IPR012417 GO:0005516
Mtr3g0489 675 MobiDBLite consensus disorder prediction 60 115 - -
Mtr3g0489 675 MobiDBLite consensus disorder prediction 567 586 - -
Mtr3g0489 675 Pfam Plant calmodulin-binding domain 557 653 IPR012417 GO:0005516
Mtr3g0489 675 MobiDBLite consensus disorder prediction 254 276 - -
Mtr3g0489 675 MobiDBLite consensus disorder prediction 344 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0489 Mtr-Chr3 6330400 6333299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0489 75 248 Calmodulin-binding Proteins AT2G38800 49.180 1.34e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0489 - - cam:101515669 744.191