Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0486 ATGGCTTTGACTACCTCAACCTTAACAGAAAAGAAGAAGGTTTTATTTATCTTGGGTTCAACAGGAACTGGGAAGACTAAACTTTCCATCAACTTAGGAACTCAATTCCCATCCGAGATCATCAATTCAGACAAAATTCAAGTCTACAAAGGCCTTGACATTGTCACCAATAAGGTACAGGAATCTGAACGTTGTTCAATTCCTCATCATATATTAGGCATCATTGATGATCCTGAATATGATTTCACTGTGGATGATTTTTGCAAGCACGTGCTTGAAGCTTTAGATCTTATAATTGAAAATGGACACCTACCTATTATTGTAGGAGGGTCAAATTCTTACCTAAAAAAATTAGTTGACGACCCAGTCATTGCATTTCATTCAAAATATGATTGTTGTTTTATTTGGGTCGACGTGTCTCTGCCTATTCTCTTTCCATATTTGGACAAAAGAGTGGATGAGATGGTTGAAGCAGGGATGGTAGATGAGATAAGAGAATTTTTTGTACCTGGAGCAGACAACACAAAAGGAATTAGAAGGGCTATTGGGGTTCCAGAGCTTGATTCTTACTTTGAAATAGAAATGAAAAAAGGTATAGATGATGCTGAAAAGGAAAAGATACTAAAGGAAGCGATTAGAAAAACGAAACAAAACACCTTCAAATTGGCTGAAAATCAACACTCGAAGATCCAAAATATGGCCGATAAGCTTGGATCGATGATTAAAAAAATTAATTCTACAGAAGTCTTTGAGGTCATTCTAAGGGGGGAAGACTATCAACATTTGTATCAAGATATTGTAATTAAGCCAAGCATGAAGATAGTGAAGAGATTTCTTGAGGAGACAAACCCCAGATTTAAAAATGAAAAATATTCAAATGAAATTGGGAAACACACACCTAATGGTGTTTGA 912 0.3575 MALTTSTLTEKKKVLFILGSTGTGKTKLSINLGTQFPSEIINSDKIQVYKGLDIVTNKVQESERCSIPHHILGIIDDPEYDFTVDDFCKHVLEALDLIIENGHLPIIVGGSNSYLKKLVDDPVIAFHSKYDCCFIWVDVSLPILFPYLDKRVDEMVEAGMVDEIREFFVPGADNTKGIRRAIGVPELDSYFEIEMKKGIDDAEKEKILKEAIRKTKQNTFKLAENQHSKIQNMADKLGSMIKKINSTEVFEVILRGEDYQHLYQDIVIKPSMKIVKRFLEETNPRFKNEKYSNEIGKHTPNGV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0486 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 296 IPR039657 -
Mtr3g0486 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Mtr3g0486 303 Pfam IPP transferase 47 121 - -
Mtr3g0486 303 Pfam IPP transferase 128 228 - -
Mtr3g0486 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 171 IPR027417 -
Mtr3g0486 303 Gene3D - 11 279 IPR027417 -
Mtr3g0486 303 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0486 Mtr-Chr3 6312745 6313658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0486 95 280 C2H2 Transcription Factor Family AT2G27760 28.910 9.25e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0486 K10760 - gmx:121173984 414.461