Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0485 ATGGCTTTGACTACCTCAACCTTAGCAGAAAAGAAGAAGGTTTTATTTATATTGGGTGCAACAGGAACTGGGAAGACTAAACTTTCCATCAACTTAGGAACTCAGTTCCCATCCGAGATCATCAATTCAGACAAAATTCAAGTCTATAAAGGCCTTGACATTGTCACTAATAAGGTACAAGAATCTGAACGTTGTTCAATTCCTCATCATCTATTAGGCATCATTGATGATCCTGAATATGATTTCACTGTGGATGAGTTTTGCAAGCACGTTCTTGAAGCTTTGGCTCTTATAATTGCAAATGGACGCCTGCCTATCATTGTAGGAGGGTCAAATTCTTACCTAAAAAAATTAGTTGAGGACCCATCCATTGCATTTCATTCAACATATGATTGTTCTTTTGTTTGGCTTGACGTATCTTTGCCTATTCTGTTTCCATATTTGGACAAAAGAGTTGATGAGATGGTTGGGGCAGGGATGGTAGATGAGATAAGAGAATTTTTTGTGCCTGGAGCAGACAACACAAAAGGAATTAGAAGGGCTATCGGGGTGCCAGAGCTTGATTCTTACTTTGAAATGGAAATGAAAAAAGGTGTAGATGATGCTGAAAAGGAAAAGATACTGAAGGAAGCGATTAGAAAAACCAAACAAAACACCTTCATATTGGCTGAAAACCAACACTTGAAGATCCAAAATATGGCTAATAAGCTTGGATCGATGATTAACAAAATTAATTCTACAAAAGTCTTTGAGGCCATTCTAAGGGGGGAAGACTATCAACATCTGTATCAAGAGATTGTAATTAAACCAAGCATGAAGATAGTGAAGAGATTTCTGGAGGAGACAAGCCCTAGATTTAAAAATTAA 867 0.3737 MALTTSTLAEKKKVLFILGATGTGKTKLSINLGTQFPSEIINSDKIQVYKGLDIVTNKVQESERCSIPHHLLGIIDDPEYDFTVDEFCKHVLEALALIIANGRLPIIVGGSNSYLKKLVEDPSIAFHSTYDCSFVWLDVSLPILFPYLDKRVDEMVGAGMVDEIREFFVPGADNTKGIRRAIGVPELDSYFEMEMKKGVDDAEKEKILKEAIRKTKQNTFILAENQHLKIQNMANKLGSMINKINSTKVFEAILRGEDYQHLYQEIVIKPSMKIVKRFLEETSPRFKN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0485 288 Pfam IPP transferase 129 226 - -
Mtr3g0485 288 Pfam IPP transferase 47 121 - -
Mtr3g0485 288 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 287 IPR039657 -
Mtr3g0485 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 170 IPR027417 -
Mtr3g0485 288 Gene3D - 11 279 IPR027417 -
Mtr3g0485 288 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Mtr3g0485 288 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0485 Mtr-Chr3 6306456 6307322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0485 95 280 C2H2 Transcription Factor Family AT2G27760 28.436 1.84e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0485 K10760 - gmx:121173984 402.134