Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0481 ATGTCACAATCAACACTACCTTCTATTTCTTCTTTCACATGTGATTGGACTTATGATGTCTTTCTCAGCTTTAGAGGCATTGATACTAGAAACAACTTCACTGGTAATCTGTACCATTCTCTACATCATCAAAGAGGTATACAAACTTTTATGGATGATGAAGAAATTCAAAAAGGAGAAGAAATCACACCTACTCTTCTTCAAGCCATTAAACAATCTAGAATTTTCATTGCTATTTTCTCCCCTAACTATGCATCTTCAACGTTTTGTTTGACTGAACTTGTTACCATCCTTGAGTGCTCAATGTTACAAGGAAGGTTATTTTTGCCGGTTTTTTACGATGTGGATCCATCCCAAATCCGAAACCTAACAGGAACTTATGCTGAAGCTTTTGCAAAACATGAGGTGAGGTTTGGAGATGAGAAGGATAGCAAGGTGCAGAAATGGAGGGATGCTTTGCGTCAAGCTGCAAATGTCTCTGGATGGCATTTCAAACCAGGGTTTGAATCAGAATATAAGATTATTGAAAAGATAGTTGAAGAAGTCTCTGTAAAGATAAACCGCGTTCCTTTGCATGTAGCAACCAACCCTATTGGCTTGGAGTCTCAAATATTAGAAGTGACATCACTCCTTGGACTTGACTCGAATGAGAGAGTCAGCATGGTAGGCATTTATGGAATCGGCGGAATAGGCAAATCAACAACTGCTCGTGCTGTGCATAACTTAATTGCTGATCAATTTGAAGGTGTGTGTTTTCTCGATGACATAAGAAAGAGGGAAATTAATCATGATCTTGCACGGCTCCAAGAAGCACTACTTTCTGATATATTGGGGGAGAAGGATATTAAAGTAGGAGATGTTTACAGAGGAATGTCAATAATTAAAAGGAGGCTTCAAAGAAAGAAAGTCCTTTTGATTCTTGATAATGTCGACAAAGTGCAGCAGTTACAGGCATTTGTAGGACATGGTTGGTTTGGCTTCGGCAGCAAGGTTATAGTCACTACAAGGGACAAGCATTTGCTAGCCACTCATGGAATTGTGAAAGTATATGAGGTTAAACAACTAAAAAGTGAAAAGGCTCTCGAATTATTTAGTTGGCATGCATTTAAAAATAAAAAAATTGATCCATGTTATGTGGATATTGCAAAACGTTTAGTAACTTATTGTCATGGTCTTCCCTTGGCTTTGGAGGTGATAGGTTCTCACTTGTTTGGAAAAAGTTTAGGTGTATGGAAATCCTCATTAGTTAAATATAAAGGAGTCCTTCGTAAAGACATCCATGAAATTCTTAAAGTTAGCTATGATGATTTGGAAGAAGATGAGAAGGGTATATTTCTAGACATAGCGTGCTTCTTCAATTCTTACGAAATAAGCTACGTCAAAGAATTACTATACTTGCATGGTTTTCATGCGGAAGATGGTATACAGGTGCTAATTGACAAATCTCTCATGAAAATTGACATCAATGGTTGTGTGAGAATGCATGACTTGATTCAAAGCATGGGCAGAGAAATCGTGAGGCAGGAATCAACGTTGGAGCCTGGAAGACGCAGTAGATTATGGTTTAGTGATGACATTGTTCAGGTTTTGGAAGAAAACAAGGGAACTGATACAGTTGAAGTCATAATCGCCAACTTGCGCAAAGGTAGAAAGGTGAAATGGTGTGGAAAAGCCTTTGGGCCGATGAAGAACTTGAAAATTCTTATAGTTCGAAATGCACAATTTTCCAATGGTCCTCAAATTCTTCCAAATAGTTTGAAAGTTCTTGATTGGAGTGGATATCCATCATCCTCCTTACCATCTAAGTTTAATCCCAAGAATCTTGCAATACTTAACCTGCCTGAAAGTCACCTTAAATGGTTCCAATCACTTAAGGTGTTTGAGATGTTGAGCTTTCTGGATTTTGAAGGATGCAAGTTCCTAACTAAATTACCTAGCTTATCTAGAGTACCATATTTGGGGGCTTTGTGTCTTGATTACTGCATTAATTTAATTAGAATCCATGATTCAGTTGGGTTTCTTGGCAGCCTTGTGTTATTCAGTGCTCAAGGGTGCTCCCGACTAGAAAGTTTGGTTCCCTACATTAACTTGCCATCTCTAGAGACTTTAGATCTTAGAGGTTGCTCGCGTCTTGATAACTTCCCAGAAGTACTAGGATTGATGGAGAATATAAAAGATGTTTATTTGGATCAGACTGACCTATACCAGTTGCCTTTTACAATTGGAAATCTTGTTGGTCTCCAACGTTTGTACTTGAGGGGATGCCAAAGGATGATTCAATTACCAAGCTACATATTGCCTAAAGTTGAGATAATCACAACTTATGGTTGTAGAGGATTTCGATCATCTGAAAATGAAGAAAAAGTGAGTCCAAAAGTGTTCGCAAATGCCATGTGTGTTTATAATGAATATGGGAAGTCCTTCCTTAATGTGTATTCTCGTAACATAAGCTCCAACGATGTGATAGAAGTAAGTCATCCTTGGTGGAGCCAGCATGGTTATGATCTCTCGAATTTTGAATTTGACCTATTTTGTTCGAAACTTGAACTGGGTAAGCTTAAAAGGAGTGAATCATCAGTGTGTTTTTGGTTCCGGAAAAAATTCCCCACGATAGCTCTATGGTGTCTTGTAAAACCTGGAAATCATCTAAACAACATGGTGTTGGATTTCAAGCTGAACGTACTCATCAATGGCACTAAGCAACTCACTTCTTCATGTCAATACATATTTTATACACATAAAAAGACTGACCAATTTCTTTGTTGTGATCTACAATGCAAAATGGAGGGCGTATTTTCAGATAATGAATGGAACGTTGTGGAGATTTTATGTGAGATGGAACATCTCATGCCTGGTGATTCTAAAAGGACCATGGCTCACCAAGAATGGACCACTAAGAAGATTCTGAAGTGGTCTCTCCTGTATGTCTACCCAGAAAATGAAGAGGAAGATTACAAATTATTTGACAACCCTGATTCTCCTCCACCAACTAAAGAGATAGTTGCACACAAGCAGATATTACAAGAATATCTACAAATCTACAACTCTTCCTTGGCTATAGGGGAACGGCAATTGCGGGCTTATATTGATGTGACTTATTGA 3102 0.382 MSQSTLPSISSFTCDWTYDVFLSFRGIDTRNNFTGNLYHSLHHQRGIQTFMDDEEIQKGEEITPTLLQAIKQSRIFIAIFSPNYASSTFCLTELVTILECSMLQGRLFLPVFYDVDPSQIRNLTGTYAEAFAKHEVRFGDEKDSKVQKWRDALRQAANVSGWHFKPGFESEYKIIEKIVEEVSVKINRVPLHVATNPIGLESQILEVTSLLGLDSNERVSMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIRKREINHDLARLQEALLSDILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKVQQLQAFVGHGWFGFGSKVIVTTRDKHLLATHGIVKVYEVKQLKSEKALELFSWHAFKNKKIDPCYVDIAKRLVTYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKGVLRKDIHEILKVSYDDLEEDEKGIFLDIACFFNSYEISYVKELLYLHGFHAEDGIQVLIDKSLMKIDINGCVRMHDLIQSMGREIVRQESTLEPGRRSRLWFSDDIVQVLEENKGTDTVEVIIANLRKGRKVKWCGKAFGPMKNLKILIVRNAQFSNGPQILPNSLKVLDWSGYPSSSLPSKFNPKNLAILNLPESHLKWFQSLKVFEMLSFLDFEGCKFLTKLPSLSRVPYLGALCLDYCINLIRIHDSVGFLGSLVLFSAQGCSRLESLVPYINLPSLETLDLRGCSRLDNFPEVLGLMENIKDVYLDQTDLYQLPFTIGNLVGLQRLYLRGCQRMIQLPSYILPKVEIITTYGCRGFRSSENEEKVSPKVFANAMCVYNEYGKSFLNVYSRNISSNDVIEVSHPWWSQHGYDLSNFEFDLFCSKLELGKLKRSESSVCFWFRKKFPTIALWCLVKPGNHLNNMVLDFKLNVLINGTKQLTSSCQYIFYTHKKTDQFLCCDLQCKMEGVFSDNEWNVVEILCEMEHLMPGDSKRTMAHQEWTTKKILKWSLLYVYPENEEEDYKLFDNPDSPPPTKEIVAHKQILQEYLQIYNSSLAIGERQLRAYIDVTY* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0481 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Mtr3g0481 1033 Gene3D - 354 438 IPR042197 -
Mtr3g0481 1033 Pfam NB-ARC domain 216 406 IPR002182 GO:0043531
Mtr3g0481 1033 Pfam TIR domain 18 185 IPR000157 GO:0007165
Mtr3g0481 1033 Gene3D Ribonuclease Inhibitor 695 774 IPR032675 -
Mtr3g0481 1033 Gene3D Ribonuclease Inhibitor 545 694 IPR032675 -
Mtr3g0481 1033 PRINTS Disease resistance protein signature 221 236 - -
Mtr3g0481 1033 PRINTS Disease resistance protein signature 297 311 - -
Mtr3g0481 1033 PRINTS Disease resistance protein signature 389 403 - -
Mtr3g0481 1033 PRINTS Disease resistance protein signature 695 711 - -
Mtr3g0481 1033 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 162 IPR035897 -
Mtr3g0481 1033 Gene3D - 187 349 IPR027417 -
Mtr3g0481 1033 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 695 - -
Mtr3g0481 1033 Gene3D - 14 186 IPR035897 -
Mtr3g0481 1033 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Mtr3g0481 1033 SMART AAA_5 218 355 IPR003593 -
Mtr3g0481 1033 SMART till_3 17 159 IPR000157 GO:0007165
Mtr3g0481 1033 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Mtr3g0481 1033 SUPERFAMILY L domain-like 553 839 - -
Mtr3g0481 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 695 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0481 Mtr-Chr3 6270894 6276419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0481 12 777 WRKY Transcription Factor Family AT4G12020 32.748 2.87e-91 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0481 - - mtr:MTR_3g020650 2060.03