Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0480 ATGTCACAATCAACACTACCTTCTATTTCTTCTTTCACATGTGATTGGACTTATGATGTCTTTCTCAGCTTTAGAGGCATTGATACTAGAAACAACTTCACTGGTAATCTGTACCATTCTCTACATCATCAAAGAGGTATACAAACTTTTATGGATGATGAAGAAATTCAAAAAGGAGAAGAAATCACACCTACTCTTCTTCAAGCCATTAAACAATCTAGAATTTTCATTGCTATTTTCTCCCCTAACTATGCATCTTCAACGTTTTGTTTGACTGAACTTGTTACCATCCTTGAGTGCTCAATGTTACAAGGAAGGTTATTTTTGCCGGTTTTTTACGATGTGGATCCATCCCAAATCCGAAACCTAACAGGAACTTATGCTGAAGCTTTTGCAAAACATGAGGTGAGGTTTGGAGATGAGAAGGATAGCAAGGTGCAGAAATGGAGGGATGCTTTGCGTCAAGCTGCAAATGTCTCTGGATGGCATTTCAAACCAGGGTTTGAATCAGAATATAAGTTTATTGAAAAGATAGTTGAAGAAGTCTCTGTAAAGATAAACCGCATTCCTTTGCATGTAGCAACCAACCCAGTTGGCTTGGAGTCTCAAATATTAGAAGTGACATCACTCCTTGGATTTGACTCGAATGAGAGAGTCAACATGGTAGGCATTTATGGAATCGGCGGAATAGGCAAATCAACAACTGCTCGTGCTGTGCATAACTTGATTGCTGATCAGTTTGAAGGTGTGTGTTTTCTCGATGACATAAGAAAGAGGGAAATTAATCATGATCTTGCACAACTCCAAGAAACACTACTTGCTGATATATTGGGGGAGAAGGATATTAAAGTAGGTGATGTTTACAGAGGAATGTCAATAGTTAAAAGGAGGCTTCAAAGAAAGAAAGTCCTTTTGATTCTTGATAATGTTGACAAAGTGCAGCAGTTACAGGCATTTGTAGGAGGACATGACTGGTTTGGCTTCGGCAGCAAGGTTATAGTCACTACAAGGGACAAGCATTTGCTAGCCACTCATGGAATTGTGAAAGTATATGAGGTTAAACAACTAAAAAGTGAAAAGGCTCTCGAGTTATTTAGTTGGCATGCATTTAAAAATAAAAAAATTGATCCATGTTATGTGGATATTGCAAAACGTTTAGTATCTTATTGTCATGGTCTTCCCTTGGCTTTGGAAGTGATAGGTTCTCACTTGTTTGGAAAAAGTTTAGGTGTATGGAAATCCTCATTAGTTAAATATAAACGAGTCCTTCGTAAAGACATCCACGAAATTCTTAAAGTTAGCTATGATGATTTGGAAGAAGACGAGAAGGGTATATTTCTAGACATAGCGTGTTTCTTCAATTCTTATGAAATAAGCTACGTCAAAGAATTGCTATACTTGCATGGTTTTCAAGCGGAAGATGGTATACAAGTGCTAATTGATAAATCTCTCATGAAAATTGACATCAATGGTTGTGTGAGAATGCATGACTTGATTCAAGGCATGGGCAGAGAAATCGTGAGGCGGGAATCAACGTCGGAGCCTGGAAGACGCAGTAGATTGTGGTTTAGTGATGACATTGTTCGTGTTTTGGAAGAAAACAAGGGAACTGATACAATTGAAGTCATAATCGCCGATTTGCGCAAAGGCAGAAAAGTGAAATGGTGTGGAAAAGCCTTCGGGCAGATGAAGAACTTGAGAATTCTTATCATTAGAAACGCAGGATTTTCCAGAGGTCCTCAAATTCTTCCAAATAGTTTGTCAGTGCTTGATTGGAGTGGATATCAATTATCCTCTTTGCCATCTGATTTTTATCCTAAGAATCTTGTCATACTTAATCTGCCTGAAAGTTGCCTTAAATGGTTCGAATCACTCAAGGTGTTTGAGACGTTGAGCTTTCTGGATTTTGAAGGCTGCAAACTCCTAACTGAAATGCCTAGCTTATCTAGAGTACCAAATTTGGGGGCACTATGTCTTGATTACTGCACTAATTTAAATAAAATCCATGACTCGGTTGGGTTTCTTGAGAGGCTTGTGTTATTAAGTGCTCAAGGATGCACCCAACTAGAAATATTGGTTCCCTACATCAACTTGCCATCTTTAGAGACTTTAGATCTTAGAGGTTGCTCGCGTCTTGAGAGCTTCCCAGAAGTAGTAGGAGTGATGGAGAATATAAAAGATGTTTATTTAGACCAGACTGCCCTAAAACAATTGCCTTTTACAATTGGGAATCTGATTGGGCTCCGACGTTTGTTCTTGAGGGGATGCCAAGGGATGATTATGCTACCAAGCTACATATTGCCCAAATTTGAGATAATAACATCTTATGGTTGTAGAGGATTTCGATCATCTGAAGACGAAGAAAAAGTGAGTCCAAAAGTGTTTACAAATGCCATGTGTGTTTACAATGAAAATAGGAAGTGCTTCCTTAATGTGTATTCTCGTAATATATTCTCCAACGATGTGATAGAAATATGTAGTCCTCAGTGGAGCCAAAGTTTGTTTGATCCAGCAAATTTAGAAAGGTTTCACTATGGGATTTCACATAGGATAGTAAATGTGGATAAGCTCAGAAGCAATGAATCATCAGTGTGTTTTTGGTTCAAAAAAAATTTTCCCAGGGTAGGTCTATGGTGTTTTGCAGAACCTGAAAAACATTTTGATAACATGGTGTTAGATTTCAAATTGAATCTACTCATCAATGGCACTAATAAACTCACTTCTTCATGTAAATACATATTTTATACATGCAATAAGATGGACCAAATCCTTTGCTGTGAACTACAATCCAAAGTGGAGGGTGCATTTTCTGAGAATGAGTGGAACCAGGTGGAGATTTCATGTGAGATGGAACACCTAATGCCTTGTGATTCTAAGATAGTCACGGCCTACCAGGACTGGACCAATAAAAGGATTCTACAATGGACTCTCATATATGTCTACCCGGAAAATGAAAAGGTTGCTTTCAGGTTTTTTAACAATTGCGATTCTTCATTTTCAACTGAGCAGCATATTCAAAAGCAGCAAATAATACTCAAAATCCTACGGAAGAAGGCTGTCCACAAGACAGCTACTACAGACGACAAAAGGCTTCAAAGCACTCTGAAGAGAATTGGAGTGAATGGTATCCCTGCCAAAGTACAAGCATCTATTGCTGCCAATACTTGGGTTGTTAGCAGTTCTCCTCAAACAAAGAAGTTGCAGGATATTCTCCCCAACATCATTCACCAACTAGGGCCAGATAACTTGGAAAATCAGAAGAAGCTAGCAGAGCAATTTCAGAAGCAGGCTCCTGAAGCAGGAGCTGATGCAACCGCAGCACAAGAGGATGATGATGATGCTGTACCAGATCTTGTCCCCGGGGAGACTTTTGAAACCGCTGCTGAGGAGACGAAGGCTTAA 3402 0.3901 MSQSTLPSISSFTCDWTYDVFLSFRGIDTRNNFTGNLYHSLHHQRGIQTFMDDEEIQKGEEITPTLLQAIKQSRIFIAIFSPNYASSTFCLTELVTILECSMLQGRLFLPVFYDVDPSQIRNLTGTYAEAFAKHEVRFGDEKDSKVQKWRDALRQAANVSGWHFKPGFESEYKFIEKIVEEVSVKINRIPLHVATNPVGLESQILEVTSLLGFDSNERVNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIRKREINHDLAQLQETLLADILGEKDIKVGDVYRGMSIVKRRLQRKKVLLILDNVDKVQQLQAFVGGHDWFGFGSKVIVTTRDKHLLATHGIVKVYEVKQLKSEKALELFSWHAFKNKKIDPCYVDIAKRLVSYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKRVLRKDIHEILKVSYDDLEEDEKGIFLDIACFFNSYEISYVKELLYLHGFQAEDGIQVLIDKSLMKIDINGCVRMHDLIQGMGREIVRRESTSEPGRRSRLWFSDDIVRVLEENKGTDTIEVIIADLRKGRKVKWCGKAFGQMKNLRILIIRNAGFSRGPQILPNSLSVLDWSGYQLSSLPSDFYPKNLVILNLPESCLKWFESLKVFETLSFLDFEGCKLLTEMPSLSRVPNLGALCLDYCTNLNKIHDSVGFLERLVLLSAQGCTQLEILVPYINLPSLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTALKQLPFTIGNLIGLRRLFLRGCQGMIMLPSYILPKFEIITSYGCRGFRSSEDEEKVSPKVFTNAMCVYNENRKCFLNVYSRNIFSNDVIEICSPQWSQSLFDPANLERFHYGISHRIVNVDKLRSNESSVCFWFKKNFPRVGLWCFAEPEKHFDNMVLDFKLNLLINGTNKLTSSCKYIFYTCNKMDQILCCELQSKVEGAFSENEWNQVEISCEMEHLMPCDSKIVTAYQDWTNKRILQWTLIYVYPENEKVAFRFFNNCDSSFSTEQHIQKQQIILKILRKKAVHKTATTDDKRLQSTLKRIGVNGIPAKVQASIAANTWVVSSSPQTKKLQDILPNIIHQLGPDNLENQKKLAEQFQKQAPEAGADATAAQEDDDDAVPDLVPGETFETAAEETKA* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0480 1133 PRINTS Disease resistance protein signature 221 236 - -
Mtr3g0480 1133 PRINTS Disease resistance protein signature 297 311 - -
Mtr3g0480 1133 PRINTS Disease resistance protein signature 390 404 - -
Mtr3g0480 1133 PRINTS Disease resistance protein signature 696 712 - -
Mtr3g0480 1133 MobiDBLite consensus disorder prediction 1091 1133 - -
Mtr3g0480 1133 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Mtr3g0480 1133 SUPERFAMILY "Winged helix" DNA-binding domain 426 532 IPR036390 -
Mtr3g0480 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 690 IPR044974 GO:0006952
Mtr3g0480 1133 SMART AAA_5 218 356 IPR003593 -
Mtr3g0480 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 162 IPR035897 -
Mtr3g0480 1133 Pfam NB-ARC domain 218 419 IPR002182 GO:0043531
Mtr3g0480 1133 SUPERFAMILY L domain-like 545 809 - -
Mtr3g0480 1133 Pfam TIR domain 18 186 IPR000157 GO:0007165
Mtr3g0480 1133 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 690 - -
Mtr3g0480 1133 Gene3D - 1023 1078 IPR038187 -
Mtr3g0480 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr3g0480 1133 SMART till_3 17 159 IPR000157 GO:0007165
Mtr3g0480 1133 Gene3D - 355 439 IPR042197 -
Mtr3g0480 1133 Gene3D - 188 350 IPR027417 -
Mtr3g0480 1133 Gene3D Ribonuclease Inhibitor 696 776 IPR032675 -
Mtr3g0480 1133 Gene3D Ribonuclease Inhibitor 550 695 IPR032675 -
Mtr3g0480 1133 Gene3D - 14 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0480 Mtr-Chr3 6264612 6270866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0480 12 778 WRKY Transcription Factor Family AT4G12020 32.238 3.83e-93 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0480 - - mtr:MTR_3g020650 1812.73