Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0479 ATGGCAGATAGTCTGAAGGAAACACTCCTCGCAATCTCAACTTCTTTAAAGGTGTTGTTAGACAAGCTTGTTGAGGAAAACATCCGCAGCACGAAGCTTGACGTTTCACTCTTGAAAAATTTCAAGTCAACGCTGCTGAAACTTCAAGTTATAGTTAATTATGTTGAGAAGAAACGGATCACCACCACTGTACGGCATTGGCTGGATAGGCTGAGGTATGATGCCATAGAAATTGTCCATTTGTTTAACGAAATCAACACTGAGGCTCATGTGCTGAATGTTCTTCCTATTCATTTCAAACGCTCTTACTTGCGAAAATTAATTGAAAAATTTGAAGGCTGGAGTTCTGGAGAACAGCTAGGTAAATTAGGTGAATGGAATGGAACTCCTCCTTCACTTTCTCTTCTGGTTGATGAATCTCCTATACAACTCGTCTCACTCTCAGCTTCTGTGAAGGTGTTGTTAAACAAGATTGTTTCTAGTCAGTTCGTCGACAACTTCCACAGCACTAAACTTGATGTTTCACTCTTGGAAAAGCTTAAGACAATACTGCTCAGGGTTCAAGCTTTATATCATAGCGATGATTTTCTGTGGGTTCAAGCTAAACTTTTTAACGATGATTTTAAGACAACACGGTTGGATTTTCAAGATGATGACGTGATACTTACTGTATTGCTTTGGCTGGATATGTTGAGAAGTGCTGTCTTTGAAGTTGGCTATTTGTTGGAGGAAATCAACCCTCAGACATTGCCTTGCAAAGTGGAAGCAGAGTATCAAACCCTAACTACTCCTTCTCAGTTTTCTTCTTCTTTCAAATGCTTTAATGGAGTGACGAATTCTAAATTGCAAAAATTAATTGAAAGATTACAATTCTTTAGTTCACGAGCACAAGATCAATTTAGTGGTTCCAGTTCCAAAAGTGTTTGGCATCAAACTCCTACAAGTTCTATTATGGATGATGAATCTTGTATTTATGGAAGAGACAATGATATAAAGAAACTTAAACATCTTTTGTTGTCTAGTGACGGTGATGATGGTAAAATAGGAATTATTTCCATTGTGGGTATTGAAGGGATTGGTAAAACAACCCTTGCTAAGGTTCTTTACAATGATCCCGATGTTAAGGATAAATTTGAGTTAAAAGTGTGGTCACATGTTTCAAAAGACTTTGATGATGATTTGCATGTTTTGGAAACCATTCTTGATAACTTGAATATAAACAGAAATGAAACAAGTGGCGTAAATATCATTTACCCAAAATATTTGCTAGTATTGGATGGGGTATGTGATGCAAGATCTATCAATTGGACATTAATGATGAATATCACTAATGTTGGTGAAACAGGAAGTAGGATCATCATCACAACACAGGATGAAAAAGTTGCACTATCAATACAAACCTTTGCACTACCCATGCGAACCTTTCTTTCTGTCCACTACTTGACACCTTTGGAAAGTGAAGATTGCTGGTCTTTACTTGCCGGGCATGCATTTGGAGAACATAACGACCAACGCCAATCCAATCTAGAAGAAATTGGCAGAGAAGTTGCAAATAAATGTTATGGATCACCATTTGCTGCAGTAGCACTTGGGGATATTCTTCGCACCAAATTGTCCCCAGATTACTGGAATTATGTGCTACAAAGTGACATTCGGTTATTGATAGATCATGATGTTCGACCTTTTATACAACTGAACTATCACTATCTTTCGACTCTTTTAAAAAACTGCTTTGCATATTGTTCAATTTTTCCGAAGAAGTCCATCATAGAAAAAAATTTGGTAGTTCAGTTGTGGATTGCAGAAGGCTTAGTAGAATCGTCCATAAACCAGGAAAAAGTTGGTGAAGAATACTTTGATGTACTAGTGTCAAGGTCATTGCTGCATCAACAATCTATTGGTAATGAGGAACAAAACTTTGAAATGCATACACTTGTCCATGATTTAGCTACAGAGGTTTCATCTCCACACTGCATCAATATGGGCGAACATAACTTACATGATATGATACATAAGCTATCATACAATACAGGTACATATGACTCATATGATAAATTTGGTCAATTGTATGGATTAAAAGATCTACGTACCTTTCTAGCATTACCATTAGAAGAACGATTGCCTCGTTGTTTGCTATCAAACAAGGTAGTACATGAGTTGCTGCCAACAATGAAACAATTGCGTGTGTTGTCTTTGACAAACTACAAAAGCATCACTGAGGTTCCCAAATCTATTGGAAATTTGTTATACCTGCGGTACTTAAATCTTTCTCACACTAAGATTGAAAAGTTGCCTAGTGAAACATGCAAGCTTTACAATCTGCAGTTCTTGTTGTTGTCAGGCTGTAAAAGGCTCACTGAATTGCCAGAGGACATGGGAAAATTGGTTAGTTTGCGCCGTCTTGACATTAGTGACACTGCATTGAGGGAGATGCCCACACAAATAGCCAAACTAGAAAATCTTGAAACTTTGTCTGACTTTCTTGTCAGCAAACATACTGGTGGATTGATGGTTGGAGAGCTAGGAAAGTATCCTCTTCTAAATGGAAAACTTTCCATCTCACAACTACAAAATGTCAATAACCCTTTTGAAGCAGTTCAAGCCAATATGAAGATGAAAGAACGAATAGACAAGTTAGTTTTAGAATGGGCTTGTGGTAGTACTTGTTCAGATTCACAAATTCAGAGTGTTGTACTTGAACATTTGCGACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGGGGAATCAACTTTCCGAATTGGTTAGGTGATTCGTTATTTACCAACATGATGTATTTAAGGATCTCGAATTGTGGTGATTGTTTATGGCTTCCACCCCTTGGACAATTGGGTAATCTGAAAGAACTCATTATTGAAGGGATGCAATCCATACAGATAATTGGTACTGAGTTCTATGGAAGTGATAGTTCTCCTTCATTTCAACCATTTCCCTCCTTGGAGACTCTACATTTTGAGAATATGCAAGAGTGGGAAGAGTGGAACTTGATTGGAGGTATGGATAAGTTTCCTAGTCTAAAAACTTTGTCACTAAGTAAGTGTCCAAAACTGAGATTAGGAAACATACCTGACAAATTTCCTTCTTTAACTGAACCTGAGTTGAGAGAATGTCCTCTATCAGTGCAATCAATTCCATCATTAGATCATGTATTCAGCCAACTGATGATGTTCCCCTTGAATTCTCTGCGACAGTTGACCATAGACGGGTTTCCATCTCCGATGTCTTTCCCAACAGAAGGTCTCCCAAAAACCTTGAAAATTCTTACAATCAGTAACTGTGTGAATCTAGAGTTCCTTCCTCATGAATACTTGCACAAGTACACATCGCTTGAGGAATTGAAAATATCTTATAGTTGTAATTCAATGATATCATTTACTTTGGGTGTTCTCCCGGTCCTCAAGAGTCTGTTTATTGAAGGTTGTAAGAATCTGAAGTCGATATTAATTGCGGAAGACGCGTCGCAAAAGAGTCTCTCATTTCTTAAAAGCATCAAAATATGGATTGTAATGAACTGGAGTCATTTTCCACAGGTGGATTGCCCACTATAA 3576 0.377 MADSLKETLLAISTSLKVLLDKLVEENIRSTKLDVSLLKNFKSTLLKLQVIVNYVEKKRITTTVRHWLDRLRYDAIEIVHLFNEINTEAHVLNVLPIHFKRSYLRKLIEKFEGWSSGEQLGKLGEWNGTPPSLSLLVDESPIQLVSLSASVKVLLNKIVSSQFVDNFHSTKLDVSLLEKLKTILLRVQALYHSDDFLWVQAKLFNDDFKTTRLDFQDDDVILTVLLWLDMLRSAVFEVGYLLEEINPQTLPCKVEAEYQTLTTPSQFSSSFKCFNGVTNSKLQKLIERLQFFSSRAQDQFSGSSSKSVWHQTPTSSIMDDESCIYGRDNDIKKLKHLLLSSDGDDGKIGIISIVGIEGIGKTTLAKVLYNDPDVKDKFELKVWSHVSKDFDDDLHVLETILDNLNINRNETSGVNIIYPKYLLVLDGVCDARSINWTLMMNITNVGETGSRIIITTQDEKVALSIQTFALPMRTFLSVHYLTPLESEDCWSLLAGHAFGEHNDQRQSNLEEIGREVANKCYGSPFAAVALGDILRTKLSPDYWNYVLQSDIRLLIDHDVRPFIQLNYHYLSTLLKNCFAYCSIFPKKSIIEKNLVVQLWIAEGLVESSINQEKVGEEYFDVLVSRSLLHQQSIGNEEQNFEMHTLVHDLATEVSSPHCINMGEHNLHDMIHKLSYNTGTYDSYDKFGQLYGLKDLRTFLALPLEERLPRCLLSNKVVHELLPTMKQLRVLSLTNYKSITEVPKSIGNLLYLRYLNLSHTKIEKLPSETCKLYNLQFLLLSGCKRLTELPEDMGKLVSLRRLDISDTALREMPTQIAKLENLETLSDFLVSKHTGGLMVGELGKYPLLNGKLSISQLQNVNNPFEAVQANMKMKERIDKLVLEWACGSTCSDSQIQSVVLEHLRPSTNLKSLTIKGYGGINFPNWLGDSLFTNMMYLRISNCGDCLWLPPLGQLGNLKELIIEGMQSIQIIGTEFYGSDSSPSFQPFPSLETLHFENMQEWEEWNLIGGMDKFPSLKTLSLSKCPKLRLGNIPDKFPSLTEPELRECPLSVQSIPSLDHVFSQLMMFPLNSLRQLTIDGFPSPMSFPTEGLPKTLKILTISNCVNLEFLPHEYLHKYTSLEELKISYSCNSMISFTLGVLPVLKSLFIEGCKNLKSILIAEDASQKSLSFLKSIKIWIVMNWSHFPQVDCPL* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0479 1191 PANTHER DISEASE RESISTANCE PROTEIN RP 162 1106 IPR044974 GO:0006952
Mtr3g0479 1191 SUPERFAMILY L domain-like 640 1126 - -
Mtr3g0479 1191 Pfam NB-ARC domain 329 548 IPR002182 GO:0043531
Mtr3g0479 1191 ProSiteProfiles Leucine-rich repeat profile. 750 771 IPR001611 GO:0005515
Mtr3g0479 1191 Gene3D Ribonuclease Inhibitor 1052 1186 IPR032675 -
Mtr3g0479 1191 Gene3D Ribonuclease Inhibitor 854 1051 IPR032675 -
Mtr3g0479 1191 Gene3D Ribonuclease Inhibitor 705 853 IPR032675 -
Mtr3g0479 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 311 581 IPR027417 -
Mtr3g0479 1191 Gene3D - 305 468 IPR027417 -
Mtr3g0479 1191 PANTHER OS05G0414200 PROTEIN 162 1106 - -
Mtr3g0479 1191 Gene3D - 567 653 IPR036388 -
Mtr3g0479 1191 Gene3D - 484 566 IPR042197 -
Mtr3g0479 1191 PRINTS Disease resistance protein signature 350 365 - -
Mtr3g0479 1191 PRINTS Disease resistance protein signature 415 429 - -
Mtr3g0479 1191 PRINTS Disease resistance protein signature 520 534 - -
Mtr3g0479 1191 PRINTS Disease resistance protein signature 1010 1026 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0479 Mtr-Chr3 6256233 6262266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0479 719 824 WRKY Transcription Factor Family AT4G12020 35.514 2.74e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0479 - - mtr:MTR_0603s0010 1486.09