Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0475 ATGGCTTCTTCAAATGAGGATTGGAAGCCAAGACTTGGAATGGAATTTGACACTAGAGAAGAGGCTGAACAATTTTATCTTGCTTATGGTTTACGTGAGGGCTTCGGAGTTAGAGTACGCTTTACAAACAGGAAGAAAGACGGTAGTGTATCGTCATGTAGGTTTGTTTGTTGTAAGGAAGGAATACGGAAGAAAGAGGATAAATGTGCATATGAAGGAAAAATTCGGAGAGGTGAGACTAGAACGAAATGCTTAGCAAAAATTACACTTTCAAGTAAAAATGGAAAGTTGGTTATCAATGAGTTTGTAGAAAACCATAACCATGATCTACTAAATCGAGAGACAACACACATGCTTCGATCACATAGAAAGATAACTGAAGTACAAGCATATGAGATTGATATGGCTGATGACTCTGTATTAAGGCAGAAGGAAATGTATCAACTTATGAGCACACATGCAGGGCATAGCGCTAATGTTGGATTTACAGAGGTGGATTTGTTGGAGAATCCGTCCTTCTTTTATGCATATCAGATGGATATAGATGAACAGATTACAAATGTGTTCTGGTGTGATGCAAATATGATTTTGGATTACGGAGGTTCGATCATTTTTGGTGCAGCTCTAATGTATGATGAGACAATTCCATCATTTAAATGGTTGTTTGAAACATTCTTACAAGCACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCAAACAATGTCTAGGGCACTTGAAGAAGTGATGCCTGAGACTCACCATGGTTTATGCACATGGCACTTGTTGCAGAATGGAATTAAACATCTTGGAAACAGGATGAAGAAAGGAGCTTCTTTGCTAACAGATTTCAGCAAGTGCATGTATGAGATTGGCATTGAAGCAGATTTTGAGAAAGCTTGGTTTGACTTGGTCAATGAACATAATCTTCATGGAACAACTTGGATCAACTCAGTTTATGAAATAAATAAAAAATGGGCTGCATGTTATATGAAGGAAGCATTAACACTTGGCATGCGAAGTACACAAAGCGGCAACTGTAGCAGCATCGATAGTGAAGAAAGTCTCATGTTTGTTGATAAAAGTGTAGATGAAATGTTCAAGAAAGTAATAGAATGTCCAACACAAGGTAGAGACAATGACAATGATCATCCATCATTTGTGAGTTATGATGCTATGCAATCAAAGGGATTCAAGAAACAACCCAGCTCAAAGGGAACTAAGCGACATAAAAGTTTCCTTGAGCGTCAGCCCAAGAAAAGAAGTGCTCCTCCAAGTAAACACGCTCAATCTAGCCGTGTCCCACCTCAAAGAAGTTCACAGGTTAGAGAATTAACAACTAATATGGTCAATGGAGTATCTTGTTCCGCGCCTCCAACTTATGAGCCCCCGCTAGCACGTGGGGGTATGTTTGTTAGTTACACAACTATGTTGATGGCACCTTTTGATGATACAAATATTGGAGCATTACTTTGA 1485 0.3879 MASSNEDWKPRLGMEFDTREEAEQFYLAYGLREGFGVRVRFTNRKKDGSVSSCRFVCCKEGIRKKEDKCAYEGKIRRGETRTKCLAKITLSSKNGKLVINEFVENHNHDLLNRETTHMLRSHRKITEVQAYEIDMADDSVLRQKEMYQLMSTHAGHSANVGFTEVDLLENPSFFYAYQMDIDEQITNVFWCDANMILDYGGSIIFGAALMYDETIPSFKWLFETFLQAHNNKKPKTIFTDQDQTMSRALEEVMPETHHGLCTWHLLQNGIKHLGNRMKKGASLLTDFSKCMYEIGIEADFEKAWFDLVNEHNLHGTTWINSVYEINKKWAACYMKEALTLGMRSTQSGNCSSIDSEESLMFVDKSVDEMFKKVIECPTQGRDNDNDHPSFVSYDAMQSKGFKKQPSSKGTKRHKSFLERQPKKRSAPPSKHAQSSRVPPQRSSQVRELTTNMVNGVSCSAPPTYEPPLARGGMFVSYTTMLMAPFDDTNIGALL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0475 494 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Mtr3g0475 494 MobiDBLite consensus disorder prediction 405 419 - -
Mtr3g0475 494 Pfam MULE transposase domain 198 268 IPR018289 -
Mtr3g0475 494 MobiDBLite consensus disorder prediction 398 444 - -
Mtr3g0475 494 MobiDBLite consensus disorder prediction 427 444 - -
Mtr3g0475 494 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 200 IPR031052 GO:0006355
Mtr3g0475 494 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 202 347 IPR031052 GO:0006355
Mtr3g0475 494 PANTHER OS01G0852650 PROTEIN 202 347 - -
Mtr3g0475 494 PANTHER OS01G0852650 PROTEIN 4 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0475 Mtr-Chr3 6201078 6203539 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g0475 FAR1 6.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0475 - - cam:101507984 475.707