Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0474 ATGGAACAACTAACACTTCCTTATTTGTCTTCCTTCACATGTAACTGGACTTATGATGTTTTCCTTAGTTTTAGAGGCATTGATACTAGAAATAACTTCACTGGTAATCTCTACAACTCTCTCCAAAATCAAAGCGGAATACAAACTTTCATTGACGATGAAGAAATACAAAAAGGAGAAGAAATAACACCCACTCTTCTTAAAGCCATTAAAGAATCTAGGATTTTCATTGCTATTTTGTCCCCTAACTATGCATCTTCAACTTTTTGTTTGACTGAACTTGTTACCATTCTTGAGTGTTCAAAGTCAAAAGGAAGGTGGTTTTTGCCGATTTTTTATGATGTAGAACCAACCCAGATTCGAAACCTAACGGGAACTTATGCTGAAGCTTTTGCAAAACATGAGGTAAGGTTTAGAGATGAGAAGGATAAGGTGCAGAAATGGAGGGACGCTTTGCGGCAAGCTGCTAGTCTCTCTGGATGGCATTTCCAACCGGGGTCTCAACAAGAATATAAATTTATTAGAATGATAGTTGCAAATGTGTCTATAAGGATCAACCGTGTTCCTTTGCATGTTGCAAACAACCCAGTTGGGTTGGAGTCTCAGATAATAGAAGTGGCATCTCTCCTTGAATTTAAGTCTGATGAGAGAGTGAACATGGTAGGCATTTATGGAATCGGAGGAATAGGAAAATCAACAATTGCTCGTGCTCTGCATAATTTGTCTGCTGATCAATTTGAAGGTGTTTGTTTTCTTGGTGACATAAGAGAGAGGGCAACTAATCATGATCTGGCACAGCTACAAGAAACACTGCTTTCTGAAGTATTCGGGGAAAAGGGTATTAAAGTGGGAGATGTTTACAAAGGAATGTCAATGATTAAAGCGAGGCTTAAAAGAAAGAAAGTCCTTTTGATTCTTGATAATGTTGACAAAGTGCAGCAGTTACGTGCACTTGTAGGAGCACCCGATTGGTTTGGCTTCGGAAGCAAGATCATAATCACTACAAGAGACAAGCATTTGTTGGCCACTCATGGGATTGTGAAAGTATATGAGGTTAGACAGCTAAAAGATGAAAAGGCTCTTGAATTATTTAGTTGGCATGCATTTAAAGACAAAAAAAATTATCCTGGTTATGTGGATATTGCAAAACGTGCAGTATCTTATTGTGAGGGTCTTCCATTGGCTTTGGAGGTGATTGGTTCTCAATTGTTTGGAAAAAGTTTAGTTGTATGTAAATCCTCATTAGATAAATATGAAAGAGTCCTTCCCAAAGATATCCATGCAATTCTGAAAATTAGCTATGATGATTTGGAAGAAGATGAGAAGGGTATTTTTTTAGACATAGCTTGTTTCTTTAATTCTTCTGAAATAGGCTATGTCAAAGAAATACTATACTTACATGGTTTTCATGCGGAAGATGGCATACAACAGTTAACTGACAAATCTCTCATGAAAATTGATACCAATGGTTGTGTGAGAATGCATGACTTGATTCAAGACATGGGCAGAGAAATTGTGAGGCAGGAATCAACGTTGGAGCCTGGAAGACGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAAATAAGGGAACTGATACAATTGAAGTCATAATCGCTGACTTCTGCGAAGCAAGAAAAGTCAAATGGTGTGGAAAAGCCTTCGGACAGATGAAGAATTTGAAAATTCTTATAATTGGAAACGCACAATTTTCCAGAGATCCCCAAGTTCTTCCAAGTAGTTTGAGATTGCTTGATTGGCATGGATACCAATCATCCTCTTTACCATCTGATTTTAATCCCAAGAATCTTATAATACTTAACCTGGCTGAAAGTTGCCTTAAACGGGTTGAATCACTAAAGGTTTTCGAGACATTGATTTTTCTTGATTTTCAAGACTGCAAGTTCCTAACTGAAATACCTAGCTTATCTAGAGTACCAAATTTGGGGTCATTATGTCTTGATTACTGCACTAATTTATTTAGAATCCATGAATCAGTTGGTTTTCTTGCCAAGCTTGTGTTATTAAGTGCTCAAGGATGCACACAACTAGACCGTTTGGTTCCGTGCATGAACTTGCCATCTCTAGAGACATTAGATCTTAGAGGTTGCTCGCGTCTTGAGAGCTTCCCAGAAGTACTAGGAGTGATGGAGAATATAAAAGATGTTTATTTAGATGAGACTAACCTATACGAATTGCCTTTTACAATTGGAAATCTAGTTGGGCTCCAAAGTTTGTTTTTGAGGAGATGCAAAAGGACGATTCAGATACCAAGCTACGTATTGCCAAAATCTGAGATAGTAATATCGAATAAGGTTAGCGGATTTCGATCATCAAATGTTGTAGAAAAAGTTGGTCCAAAAGTGTCTGCAAATGCCATGTGTGTTTATAATGAATACGGGAAGTCCTTCCTTAATGTGTATTCTCTTAATGTAAGTACCAACAATGTCATAGAAGTATGTAGTCCTTCGTGGAATCAAGATGGGCATAAACTCAAAAATATTGGTTATCGTCTCTTTTGTCACCCGATTCATCGTGCGAGATTAATTATGGATAAAGTTAGTAGAAGCAACGAATCGCCAGTGCATTTTTGGTTTCGAAAAAAGTTCCCCAGGATTGCTCTATGCTGTTTTTTTGAAATTGGAGAGCTGTTTGACAACGTGGTGTTGGATTTCAAGTTGAATGTACTCATCAATGGCACTAAGCAACTCTCTACTTCATCTGAATACATATATTATATAAAAAGAAAGACGCACCAAAAGCTTTGTTGTGATCTACAATGCAATAAGGAGGGTATATTCTCAGAGAATGAGTGGAACCATGTGGAGATTTTATGTGAGATTGAACATCTCATGCCATATGATTCTGAACGGGGCATGGTTTACCATGACTGGATCACTAAGAGGATTCTCAAGTCGTCTGTCATACATGTCTACAGTGAAAACAATGAGGATGATTTCAATTTAGTTGAGAATCCTGATTTTCCTCTGTCAACTGAACAAAAATTTCAAGAGATGCAAAGAAGACTTAAAAGATTACATTTTATCCAACTCCATTTTCATCAAATTTGA 3084 0.3726 MEQLTLPYLSSFTCNWTYDVFLSFRGIDTRNNFTGNLYNSLQNQSGIQTFIDDEEIQKGEEITPTLLKAIKESRIFIAILSPNYASSTFCLTELVTILECSKSKGRWFLPIFYDVEPTQIRNLTGTYAEAFAKHEVRFRDEKDKVQKWRDALRQAASLSGWHFQPGSQQEYKFIRMIVANVSIRINRVPLHVANNPVGLESQIIEVASLLEFKSDERVNMVGIYGIGGIGKSTIARALHNLSADQFEGVCFLGDIRERATNHDLAQLQETLLSEVFGEKGIKVGDVYKGMSMIKARLKRKKVLLILDNVDKVQQLRALVGAPDWFGFGSKIIITTRDKHLLATHGIVKVYEVRQLKDEKALELFSWHAFKDKKNYPGYVDIAKRAVSYCEGLPLALEVIGSQLFGKSLVVCKSSLDKYERVLPKDIHAILKISYDDLEEDEKGIFLDIACFFNSSEIGYVKEILYLHGFHAEDGIQQLTDKSLMKIDTNGCVRMHDLIQDMGREIVRQESTLEPGRRSRLWFSDDIVHVLEENKGTDTIEVIIADFCEARKVKWCGKAFGQMKNLKILIIGNAQFSRDPQVLPSSLRLLDWHGYQSSSLPSDFNPKNLIILNLAESCLKRVESLKVFETLIFLDFQDCKFLTEIPSLSRVPNLGSLCLDYCTNLFRIHESVGFLAKLVLLSAQGCTQLDRLVPCMNLPSLETLDLRGCSRLESFPEVLGVMENIKDVYLDETNLYELPFTIGNLVGLQSLFLRRCKRTIQIPSYVLPKSEIVISNKVSGFRSSNVVEKVGPKVSANAMCVYNEYGKSFLNVYSLNVSTNNVIEVCSPSWNQDGHKLKNIGYRLFCHPIHRARLIMDKVSRSNESPVHFWFRKKFPRIALCCFFEIGELFDNVVLDFKLNVLINGTKQLSTSSEYIYYIKRKTHQKLCCDLQCNKEGIFSENEWNHVEILCEIEHLMPYDSERGMVYHDWITKRILKSSVIHVYSENNEDDFNLVENPDFPLSTEQKFQEMQRRLKRLHFIQLHFHQI* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0474 1027 SUPERFAMILY L domain-like 548 772 - -
Mtr3g0474 1027 SMART AAA_5 217 355 IPR003593 -
Mtr3g0474 1027 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 695 - -
Mtr3g0474 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Mtr3g0474 1027 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Mtr3g0474 1027 ProSiteProfiles TIR domain profile. 16 156 IPR000157 GO:0007165
Mtr3g0474 1027 Pfam NB-ARC domain 209 408 IPR002182 GO:0043531
Mtr3g0474 1027 PRINTS Disease resistance protein signature 220 235 - -
Mtr3g0474 1027 PRINTS Disease resistance protein signature 296 310 - -
Mtr3g0474 1027 PRINTS Disease resistance protein signature 389 403 - -
Mtr3g0474 1027 PRINTS Disease resistance protein signature 695 711 - -
Mtr3g0474 1027 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Mtr3g0474 1027 Pfam TIR domain 18 181 IPR000157 GO:0007165
Mtr3g0474 1027 SMART till_3 17 158 IPR000157 GO:0007165
Mtr3g0474 1027 Gene3D Ribonuclease Inhibitor 694 779 IPR032675 -
Mtr3g0474 1027 Gene3D Ribonuclease Inhibitor 551 693 IPR032675 -
Mtr3g0474 1027 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 695 IPR044974 GO:0006952
Mtr3g0474 1027 Gene3D - 181 348 IPR027417 -
Mtr3g0474 1027 Gene3D - 354 438 IPR042197 -
Mtr3g0474 1027 Gene3D - 14 180 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0474 Mtr-Chr3 6193055 6198450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0474 7 765 WRKY Transcription Factor Family AT4G12020 31.772 9.61e-88 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0474 - - mtr:MTR_3g020650 1517.67