Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0473 ATGACTCTGTTTCAACTTACATGTATGTGCAGGTCTGAATCAGAATATAAGTTTATTGGAAAGATAGTTGAAGAGGTTTCTATAAGGATCAGATGTATTCCTTTCCATGTTGCAAACTACCCAGTTGGGGTGGAGTCTCGGATATTAGAAGTGACATCTCTACTAGGACTTGGGTCTGATGAGAGAACAAACACGGTAGGCATTTATGGAATCGGCGGAATAGGCAAATCAACAACTGCTCGTGCTGTGCATAACTTGATTGTTGACCAATTTGAAAGTGTGTGTTTTCTTGCTGGCATAAGAGAGAGGGCGATTAATCATGGTCTAGCTCATCTCCAAGAAACACTACTTTCTGAAATACTTGGGGAGAAAGATATTAAAGTGGGAGATGTTTATAGAGGAATTTCAATAATTAAAAGAAGGCTTCAAAGAAAGAAAGTCCTTTTGATTCTTGATGATGTGGACAAAGTGGAGCATTTACGGGCACTTGCAGGAGGACATGATTGGTTTGGACTTGGCACCAAGATAATCATCACTACAAGAGACAAGCATTTGCTGGCAACTCATGGGATTGTGAAAGTGTACAAGGTTAAAGAGCTAAAAAATGAAAAGGCTTTTGAATTATTTAGTTTGCATGCATTTAAAAATAAAAAAAATTGA 660 0.3788 MTLFQLTCMCRSESEYKFIGKIVEEVSIRIRCIPFHVANYPVGVESRILEVTSLLGLGSDERTNTVGIYGIGGIGKSTTARAVHNLIVDQFESVCFLAGIRERAINHGLAHLQETLLSEILGEKDIKVGDVYRGISIIKRRLQRKKVLLILDDVDKVEHLRALAGGHDWFGLGTKIIITTRDKHLLATHGIVKVYKVKELKNEKAFELFSLHAFKNKKN* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0473 219 Gene3D - 21 194 IPR027417 -
Mtr3g0473 219 SMART AAA_5 62 200 IPR003593 -
Mtr3g0473 219 Pfam NB-ARC domain 61 218 IPR002182 GO:0043531
Mtr3g0473 219 PRINTS Disease resistance protein signature 65 80 - -
Mtr3g0473 219 PRINTS Disease resistance protein signature 141 155 - -
Mtr3g0473 219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 216 IPR044974 GO:0006952
Mtr3g0473 219 Coils Coil 212 219 - -
Mtr3g0473 219 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 216 - -
Mtr3g0473 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 217 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0473 Mtr-Chr3 6171186 6171931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0473 42 213 WRKY Transcription Factor Family AT5G45050 33.523 2.62e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0473 - - mtr:MTR_3g020420 389.808