Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0472 ATGGGCAGAGAAATTGTGAGGCAGGAATCAACGTTGGAGCCTGGAAGACGCAGTAGATTATGGTTTAGTGATGACATTTTTCATGTTTTGGAAGAAAACAAGGGAACTGATACAATTGAAGTCATAATCACCAACTTGCACAAAGACAGAAAAGTGAAATGGTGTGGAAAAGCCTTCGGGCAGATGAAGAACTTGAGAATTCTAATAATTCGAAACGCAGGATTTTCCATAGATCCTCAAATTCTTCCAAATAGTTTGAGAGTGCTTGATTGGAGTGGATATGAATCATTCTCCTTACCATTTGATTTTAATCCCAAGAATCTTGTAATACATAGCCTGCGTGACAGTTGCCTTAAACGGTTCAAATCACTCAATGTTTTTGAGACATTGAGCTTTCTTGATTTTGAAGACTGCAAGTTCCTAACTGAAATACCTAGCTTATCTAGAGTACCAAATTTGAAGTCATTATGGCTTGACTACTGCACTAACTTATTTAAAATCCATGATTCAGTTGGGTTTCTTGACAAACTTGTGTTATTAAGTGCTAAAGGATGCATCCAACTAGAAAGTTTGGTTCCCTGCATGAACTTGCCATCTCTAGAGAAATTAGATCTTAGAGGTTGCTCGCGTCTTGCGAGCTTTCCAGAAGTACTAGGAGTGATGGAGAATTTAAAAGATGTTTATTTAGATGAGACTGACCTATACCAATTGCCTTTCACATTTGGAAATCTTGTTGGGCTCCAACGTTTGTTCTTGAGGAGCTGCCAAAGGATGATTCAGATACCAAGCTACGTATTGCCAAAAGTTGAGATAGTAACATCGCATCATCGTAGGGGAGTTCGATCATCAAATGATGCAGCAAAAGTGAGTCCAAAAGTGTCTGCAAATGCCATGTGTGTTTATAATGAATACGGGAAGTCCTTCCTTAATGTGTATTCTCTTAATGTAAGTTCCAACAATGTCATAGAAGTATGTAGTCCTTCGTGGAATCAAGACGAGCATAAACTCAAAAATATGGGTTACAGTCTCTTTTGTCACCCGATTCATCGTAGGAGAGTAATTATGGATAAGGTTAGAAGCAACGAACCGTCAGTGCATCTTTGGTTTCGGAAAAAATTCCCCAGGATAGCTCTATGCTGTTTTTTTGAAACTGGAGAGTCGTTTGACAATATGGTTTTGGATTTCAAGTTGAATGTACTCATCAATGGCACTAAGCAACTCTCTACTTCATGTGTATACATGTTTTATAGAAAAAGAAAGACGGACCAAAAGTTTTTTTGTGATCTACAATGCAATATGGATGGTAGATTCTCAGAGAATGAGTGGAACCATGTGGAGATTGTTGGCATGAGTTGTCTCTTATGTAATTAG 1371 0.3815 MGREIVRQESTLEPGRRSRLWFSDDIFHVLEENKGTDTIEVIITNLHKDRKVKWCGKAFGQMKNLRILIIRNAGFSIDPQILPNSLRVLDWSGYESFSLPFDFNPKNLVIHSLRDSCLKRFKSLNVFETLSFLDFEDCKFLTEIPSLSRVPNLKSLWLDYCTNLFKIHDSVGFLDKLVLLSAKGCIQLESLVPCMNLPSLEKLDLRGCSRLASFPEVLGVMENLKDVYLDETDLYQLPFTFGNLVGLQRLFLRSCQRMIQIPSYVLPKVEIVTSHHRRGVRSSNDAAKVSPKVSANAMCVYNEYGKSFLNVYSLNVSSNNVIEVCSPSWNQDEHKLKNMGYSLFCHPIHRRRVIMDKVRSNEPSVHLWFRKKFPRIALCCFFETGESFDNMVLDFKLNVLINGTKQLSTSCVYMFYRKRKTDQKFFCDLQCNMDGRFSENEWNHVEIVGMSCLLCN* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0472 456 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 336 IPR044974 GO:0006952
Mtr3g0472 456 SUPERFAMILY L domain-like 46 320 - -
Mtr3g0472 456 Gene3D Ribonuclease Inhibitor 45 218 IPR032675 -
Mtr3g0472 456 Gene3D Ribonuclease Inhibitor 219 339 IPR032675 -
Mtr3g0472 456 PANTHER ARCHAEAL ATPASE 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0472 Mtr-Chr3 6169197 6170895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0472 2 265 WRKY Transcription Factor Family AT4G12020 37.367 5.63e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0472 - - mtr:MTR_3g020420 928.317