Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0471 ATGGAAAACCATAATAAGATGCTAATGCTAATGGTGTCTACTTTCTCCTTTTGCTTAATGCCCACTTTCTCTAAACAGAACACTTTTACTACTATTGCCCCAAATCAGTTTATGCAATTCGGTGATACACTTGTTTCTGGAACTGGAAGGTTTGAAGCAGGATTTTTCTACTTTGGAGATCCACAACGCCAATACTTCGGTATATGGTACAAGAACATATCACCAAGGACTATTGTGTGGGTTGCCAATAGAAATACTCCTGTACGTAACTCAACAGCAATGCTGAAACTCAACGACCAAGGAAATCTTGTTATTCTTGATGGCTCCAAAGGTGTCATCTGGAACTCCAATTCATCAGGAATTGTGGCGGTGAAATCAGTTATTGTGCAGTTGTTGGATTCAGGAAACCTTGTTGGGAAAGATGCAAACAGCTCTCAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTTACTGGTCCATATAGATATCTCACTTCTTGGAGATCCTCTGAAGATCCTGCTGACGGCGAGTTTTCAGTGAGGATAGATACTCACGGTTTTCCTCAACACCAAATTGCAAAGGGAACGACAACTATATTTAGAGGAGGGTCGTGGAATGGATATCTTTTCACTGGAGCTACTTGGCAAAGAAATTATAATATATTGAATTACTCATTTGTGTTAACTGACAAAGAAGTCACTTTTCAATATGAAACTTTAAACAGTTTAATTATTACTAGAGTTGTGCTAAATCCATATGGAACTTCACAACGTCTTCAATGGTCGGATCAGACACAAAATTGGGAGATTATTACTAATGCTCCTGCAGACCAGTGTGATGATTATGCCTTGTGCGGTATCAACTCTAACTGCAATATTAATAACTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAACCAAAATGGAAGTCATTGAATTGGTCTGGTGGGTGCCTCAGGAGAACAAAATTGAATTGTCACACTGGGGATGGCTTTCTGAAGTACACAAGCATGAAGTTGCCAGACACGTCAACATCTTGGTATGACAAGAGCTTGAGCCTTGAGGAATGTAAGACACTGTGCTTGAAAAACTGTACTTGCACTGCATATGCAAATTTAGATATCAGAGATGGTGGGAGTGGCTGCTTACTTTGGTTTAACAACATTGTGGACATGAGAAAACATCCTGACATAGGACAAGACATTTACATACGACTCGCATCTTCAGAACTCGATCATAAAAAGAATAAGCGAAACTTGAAGCGTGCTTGGACTGTTGCAGGAGTCATTGCGTTCATAATAGGACTAACCGTTCTTGTATTGGTTACATCAGCATATAGAGAGAAAATTGGTAAGCCAGGTTATATAAAAAAGTTATTTCATCGGAAGCATAAAAAAGAGAAGGCAGATGGTGACTTGGCTACAATATTTGATTTTTCCACCATCACTAATGCAACAAATCACTTCTCTAATAAAAATAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCTTAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTTTGTAATACATCGGGACAAGGAGTTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTACGCGAAGTAAATTACTAGATTGGACAAAGCGCTTGGAAATTATTGATGGGATTGCTCGAGGGCTGCTGTATCTCCATCAGGATTCTACATTAAGAATCATACATAGAGATCTCAAGACCAGCAATATACTTCTTGATATTGATATGATCCCTAAGATATCCGATTTTGGATTAGCCAGATCATTTACGGGAGACCAAGCTGAGGCTAAGACAAATAGAGTCATGGGAACATATGGATATATGCCTCCAGAATATGCCGTGCATGGATCTTTCTCAATAAAGTCTGATGTTTTTAGTTTCGGAGTCGTCGTACTTGAGATAATTAGCGGTAGGAAGAATCGTGGATTTTCTGACCCTCTGCACAATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATCGAAGAAAGGCCACTAGAGTTCATAGCTAACATATTATACGATGATGAGGCCATATGTTCAAAAATAATAAGATTTCTTCACGTTGGTCTACTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCATCTGCGGTTTTTATGCTAAAGGGTGAAAATTTACTCCCCAAACCAAGTAAACCCGGGTTCTACGCAGGAAAAGATGATACAAATAGCATAGGATCTTTATCTATAAATGAAGCTTCAATCACAGTGGTAGAGGCGCGACAAAACAAACAAACCAACACAAACACAATGGAGAACCATACTAAGGTGCCAATGCTAATTGTTTGCACTTTTTTATTTTGCTCCATGCCCACTTTATCTAAACAGAACACTTTTACTACTATTGCTCCAAATCAGTTTATGCAATTCGGTGATACTCTTGTTTCTGCAGCTGAGAGGTATGAAGCAGGATTTTTCAACTTTGGCGATTCACAACGCCAATACTTCGGTATATGGTACAAGAATATATCACCAAGCACTATTGTGTGGGTTGCCAATAGAAATACTCCTGTACAAAACTCAACTGCAATGATGAAACTTACTGATCAAGGAAGTCTTGTTATTATTGATGGCTCCAAAGGCATTATCTGGAATTCCAATTCATCAAGAATTGGAGTGAAACCGGTTGTTCAGCTTTTGGATTCAGGAAATCTTGTTTTGAATGATACAATCAGAGCACAGAATTTTTTGTGGGAAAGTTTTGATTATCCTGGTAACAATTTCCTTGCGGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAGATATCTCACATCTTGGAGAAGCCCTCAAGATCCTGCTGAAGGTGAGTGTTCATATAGGATAGATATGCATGGTTTTCCTCAACTGGTTACTGAAAAGGGAGAAAGATTTTTGTATAGAGGAGGGTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGAATGCACAGAGTCTTGAATTTCTCAGTAATGTTCACTGACAAAGAATTCTCTTATCAATATGAAACTATGAACCGTTCAATTATTACTAGAATGGAGCTAGATCCATCCGGAAATTCACAACGTCTTCTATGGTCAGATACGACACAAATTTGGGAGGCTATATCTTCTCGTCCTGCAGACCAATGTGATAATTATGCCTTGTGCGGTATCAACTCTAACTGCAATAGTAATAACTTTCCAACATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAACCAGAGTGGGAGTCATCAAATTGGTCTGGTGGGTGTGTAAGGAAAACAAGTTTAAATTGTGTCTATGGAGATGGGTTTTTACCATACGCAAACATGAAGTTACCAGACACGTCAGCATCGTGGTTTGACAAGAGCTTGAGCCTTGAGGAATGTATGACAGTGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATATCAGATATGTTGGAAGTGGCTGCTTACTTTGGTTTGACAACATTGTTGATATGAGAAAACATCCAGACCAAGGACAAGACATTTTCATACGGCTGGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTTGAAGCATGCTGGGACTGTTGCAGGAGTTATTACATTTATTATAGGACTAATCGTTCTTGTATTGGTCACATCAGCATATAAAAAGAAGCTTGGTAAGCCAGGATGTTTAAAAAAGTTGCTTCACAAAAAGGACGAGGAAGATAGTGACGACTTGGCAACAATATTTGATTTTTCGACCATCACTAATGCGACAAATAACTTCTATGTCAGAAACAAGCTGGGAGAAGGTGGTTTTGGACCGGTATACAAGGGCGTAATGTTAGATGGCCGAGAGATTGCTGTTAAGAGGCTCTCTAAAACCTCAGGACAAGGAACCGAGGAGTTCAAAAATGAAGTGAAGTTGATGGCAACACTTCAGCACAGAAATCTTGTAAAACTTCTTGGTTGTTCTATTCACCAAGATGAAAAGTTGTTGATCTACCAATTCATGCCGAACTTTATTTTTGGTTTGAACTTTCACACCAACCAAATTATTGTTCTCAGTTTTACTCTTGCCATAATGTATACTACGCGAAGTAAATTACTCGATTGGAGAAAGCGCTTGGAAATTATTGATGGGATTGCTCGTGGGCTGTTGTATCTGCATCAAGATTCTACACTAAGAATAATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCGAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTCGGAGTCGTTGTACTTGAGATAATCAGCGGTAAGAAGAATAGCGGATTTTGTGACCCTCAACATCGTCTAAACCTTCTTGGGCATGCATGGAGACTATGGATTGAAGAAAGACCACTAGAGTTAATAGCAGACATATTAGACGATGATGAGCCCATATGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGCTACCAGAAGATAGGCCTAATATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAGGTTACTCCCCAAACCAAATGAACCCGGGTTCTACGCAGCAAGGGATAATACAAGATCTTTATCTAAAGAGTGTTCAGTAAATGAAGCTTCAATCTCATTGTTAGAGGCCCGATAG 4977 0.3858 MENHNKMLMLMVSTFSFCLMPTFSKQNTFTTIAPNQFMQFGDTLVSGTGRFEAGFFYFGDPQRQYFGIWYKNISPRTIVWVANRNTPVRNSTAMLKLNDQGNLVILDGSKGVIWNSNSSGIVAVKSVIVQLLDSGNLVGKDANSSQNFLWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRSSEDPADGEFSVRIDTHGFPQHQIAKGTTTIFRGGSWNGYLFTGATWQRNYNILNYSFVLTDKEVTFQYETLNSLIITRVVLNPYGTSQRLQWSDQTQNWEIITNAPADQCDDYALCGINSNCNINNFPICECLEGFMPKFQPKWKSLNWSGGCLRRTKLNCHTGDGFLKYTSMKLPDTSTSWYDKSLSLEECKTLCLKNCTCTAYANLDIRDGGSGCLLWFNNIVDMRKHPDIGQDIYIRLASSELDHKKNKRNLKRAWTVAGVIAFIIGLTVLVLVTSAYREKIGKPGYIKKLFHRKHKKEKADGDLATIFDFSTITNATNHFSNKNKLGEGGFGPVYKGLMVDGQEIAVKRLCNTSGQGVEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFTGDQAEAKTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFSDPLHNLNLLGHAWRLWIEERPLEFIANILYDDEAICSKIIRFLHVGLLCVQQKPENRPNMSSAVFMLKGENLLPKPSKPGFYAGKDDTNSIGSLSINEASITVVEARQNKQTNTNTMENHTKVPMLIVCTFLFCSMPTLSKQNTFTTIAPNQFMQFGDTLVSAAERYEAGFFNFGDSQRQYFGIWYKNISPSTIVWVANRNTPVQNSTAMMKLTDQGSLVIIDGSKGIIWNSNSSRIGVKPVVQLLDSGNLVLNDTIRAQNFLWESFDYPGNNFLAGMKLKSNLVTGPYRYLTSWRSPQDPAEGECSYRIDMHGFPQLVTEKGERFLYRGGSWNGFLFTGVSWQRMHRVLNFSVMFTDKEFSYQYETMNRSIITRMELDPSGNSQRLLWSDTTQIWEAISSRPADQCDNYALCGINSNCNSNNFPTCECLEGFMPKFQPEWESSNWSGGCVRKTSLNCVYGDGFLPYANMKLPDTSASWFDKSLSLEECMTVCLKNCSCTAYANLDIRYVGSGCLLWFDNIVDMRKHPDQGQDIFIRLASSELDHKKNKRNLKHAGTVAGVITFIIGLIVLVLVTSAYKKKLGKPGCLKKLLHKKDEEDSDDLATIFDFSTITNATNNFYVRNKLGEGGFGPVYKGVMLDGREIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIHQDEKLLIYQFMPNFIFGLNFHTNQIIVLSFTLAIMYTTRSKLLDWRKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPQHRLNLLGHAWRLWIEERPLELIADILDDDEPICSEIIRFIHVGLLCVQQLPEDRPNMSSVVFMLKGERLLPKPNEPGFYAARDNTRSLSKECSVNEASISLLEAR* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0471 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Mtr3g0471 1658 Gene3D - 24 153 IPR036426 -
Mtr3g0471 1658 Gene3D - 853 979 IPR036426 -
Mtr3g0471 1658 ProSiteProfiles Bulb-type lectin domain profile. 857 978 IPR001480 -
Mtr3g0471 1658 Gene3D Transferase(Phosphotransferase) domain 1 1427 1624 - -
Mtr3g0471 1658 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Mtr3g0471 1658 SUPERFAMILY Protein kinase-like (PK-like) 1318 1635 IPR011009 -
Mtr3g0471 1658 SUPERFAMILY Protein kinase-like (PK-like) 492 779 IPR011009 -
Mtr3g0471 1658 SMART ntp_6 1171 1250 IPR003609 -
Mtr3g0471 1658 SMART ntp_6 345 424 IPR003609 -
Mtr3g0471 1658 ProSiteProfiles Protein kinase domain profile. 1331 1623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0471 1658 SMART serkin_6 1331 1590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0471 1658 SMART serkin_6 507 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0471 1658 CDD PAN_AP_plant 340 425 - -
Mtr3g0471 1658 Pfam PAN-like domain 344 410 IPR003609 -
Mtr3g0471 1658 Pfam PAN-like domain 1170 1236 IPR003609 -
Mtr3g0471 1658 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Mtr3g0471 1658 ProSiteProfiles PAN/Apple domain profile. 1170 1251 IPR003609 -
Mtr3g0471 1658 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Mtr3g0471 1658 Gene3D Phosphorylase Kinase; domain 1 1304 1406 - -
Mtr3g0471 1658 Gene3D Phosphorylase Kinase; domain 1 479 582 - -
Mtr3g0471 1658 CDD B_lectin 41 156 IPR001480 -
Mtr3g0471 1658 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Mtr3g0471 1658 Pfam S-locus glycoprotein domain 1040 1149 IPR000858 GO:0048544
Mtr3g0471 1658 Pfam Protein tyrosine and serine/threonine kinase 509 774 IPR001245 GO:0004672|GO:0006468
Mtr3g0471 1658 Pfam Protein tyrosine and serine/threonine kinase 1334 1614 IPR001245 GO:0004672|GO:0006468
Mtr3g0471 1658 CDD B_lectin 869 982 IPR001480 -
Mtr3g0471 1658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 819 - -
Mtr3g0471 1658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 848 1658 - -
Mtr3g0471 1658 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Mtr3g0471 1658 SMART blect_4 863 982 IPR001480 -
Mtr3g0471 1658 SMART blect_4 35 156 IPR001480 -
Mtr3g0471 1658 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 819 - -
Mtr3g0471 1658 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 848 1658 - -
Mtr3g0471 1658 CDD STKc_IRAK 513 781 - -
Mtr3g0471 1658 Gene3D Hepatocyte Growth Factor 1168 1250 - -
Mtr3g0471 1658 Gene3D Hepatocyte Growth Factor 341 421 - -
Mtr3g0471 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1466 1478 IPR008271 GO:0004672|GO:0006468
Mtr3g0471 1658 Pfam D-mannose binding lectin 77 182 IPR001480 -
Mtr3g0471 1658 Pfam D-mannose binding lectin 905 1008 IPR001480 -
Mtr3g0471 1658 CDD PAN_AP_plant 1166 1251 - -
Mtr3g0471 1658 SUPERFAMILY alpha-D-mannose-specific plant lectins 906 1013 IPR036426 -
Mtr3g0471 1658 CDD STKc_IRAK 1337 1619 - -
Mtr3g0471 1658 ProSiteProfiles Protein kinase domain profile. 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0471 Mtr-Chr3 6139327 6148243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0471 440 793 Receptor kinase-like Gene Family AT4G23230 51.247 1.64e-109 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0471 PK_Tyr_Ser-Thr 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0471 - - var:108337036 1929.45