Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0468 ATGGCTTTCGCTACTTCAACCTTAACAGAAAAGAAGGTTTTGTTTATATTGGGGGCAACGGGAACTGGGAAGACTAAACTTTCCATCAACTTAGGAACTCAATTCCCATCTGAGATCATCAATTCTGACAAAATTCAAGTCTACAAAGGTCTTGACATTGTCACCAATAAGGTACAAGAATCTGAACGTTGTTCAATTCCCCATCATATATTAGGCATCATTGATGATCCTGAATATGATTTCACTATGGATGAGTTTTGCAAGCACGTGCTTGAAGCTTTAGACCTCATAATTGAAAATGGACACCTACCTATTATTGTAGGAGGGTCAAATTCTTACCTTAAAAAATTACTCGAGGACCCAACTATTGCATTTCGTTCAAAATATGATTGCTGTTTTATTTGGTTAGATGTGTCTTTGCCTATTCTTTTTCCATATTTGGACAAAAGAGTTGATGAAATGGTTCAGGCAGGGATGGTAGATGAGATAAGGGATTTCTTTGTACCTGGTGCGGATAACACAAAAGGAATTAGAAGGGCTATTGGGGTTTCTGAACTTGATTCTTATTTTGAAATAGAAATGAAAAAAGGTATAGATGATGCTCAGAAGGAAAAGATACTAAAGGAAGCAATTAGAAAAACCAAACAAAACACCTTCATATTGGCTGAAAATCAATTGTCAAAAATCCAAAATATGTCGGATAAGCTTGGATCGATGGTAAAGAAAATTAATTCTACAAAAGTCTTTGAAGCCATTTTAAGGGGTGAAAATTATCAAGATTTGCATCAAGAAATTGTGATTAAGCCAAGCATGAAAATAGTAAAGAGATTTTTAGAGGAGACAAGCCATGGATTCAGAAATGTAAAATTTTCAAATGGTAATGGGAAACACACACCAAATGGTGTTTGA 909 0.3498 MAFATSTLTEKKVLFILGATGTGKTKLSINLGTQFPSEIINSDKIQVYKGLDIVTNKVQESERCSIPHHILGIIDDPEYDFTMDEFCKHVLEALDLIIENGHLPIIVGGSNSYLKKLLEDPTIAFRSKYDCCFIWLDVSLPILFPYLDKRVDEMVQAGMVDEIRDFFVPGADNTKGIRRAIGVSELDSYFEIEMKKGIDDAQKEKILKEAIRKTKQNTFILAENQLSKIQNMSDKLGSMVKKINSTKVFEAILRGENYQDLHQEIVIKPSMKIVKRFLEETSHGFRNVKFSNGNGKHTPNGV* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0468 302 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 295 - -
Mtr3g0468 302 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 295 IPR039657 -
Mtr3g0468 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 155 IPR027417 -
Mtr3g0468 302 Gene3D - 11 278 IPR027417 -
Mtr3g0468 302 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 140 240 - -
Mtr3g0468 302 Pfam IPP transferase 46 120 - -
Mtr3g0468 302 Pfam IPP transferase 127 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0468 Mtr-Chr3 6078485 6079393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0468 94 287 C2H2 Transcription Factor Family AT2G27760 29.224 1.54e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0468 K10760 - gmx:121173984 407.912