Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0467 ATGGCTTTGACTACCTCAACCTTAACAAATAAGAAGAAGGTTTTGTTTGTAATGGGTACAACGGGAACTGGGAAGACTAAACTTTCCATCAACTTAGGAACTCAATTCCCTTCAGAGATCATCAATTCAGACAAAATTCAAGTTTATAAAGGCCTTGACATTGTCACCAATAAGGTACAGAAATCTGAACGTTGTTCAATTCCACACCATATATTAGGCATAATCGATGATCCTGATTATGATTTCACTATGGATGATTTTTGCAAGCACGTGCTTGAGGCTTTAGACCTCATAACTCAAAATGGACACCTACCTATTATTGTAGGAGGGTCAAATTCTTATCTTAAAAAATTACTCGAGGATCCAACTATTGCATTTCATTCAAAATATGATTGCTCTTTTATTTGGCTAGATGTGTCTTTGCCTATTCTGTTTCCATATTTGGACAAAAGAGTTGATGAAATGGTTGCGGTAGGGATGGTAGATGAGATAAGAGACTTTTTTGTACCTGGAGCAGATAACACAAAAGGAATTAGAAGGGCAATTGGGGTTCCTGAGCTCGATTCTTATTTTGAAATGGAAATGAAAAAAGGTGTAGATGATGCTCAAAAGGAAAAGATATTACAAGAATCGATTAGAAAAACCAAACAAAACACCTTCATATTGGCTGAAAATCAATTGTCAAAGATCCAAAATATGGCTGCTAAGTTTGGATCGATGATAAACAAAATTGATTCTACAGAAGTCTTTGAAGCTATTTTAAGGGGTGAAGATTATCAACATTTGCATCAAGAGATTGTGATTAAGCCAAGCATGAAAATAGTAAAGAGATTCCTAGAGGGGACAAGCCATGGATTCAGAAAAGCCAAACATTCAAATGGAAATGGGAAACACACACCGAATGGTGTTTGA 912 0.3586 MALTTSTLTNKKKVLFVMGTTGTGKTKLSINLGTQFPSEIINSDKIQVYKGLDIVTNKVQKSERCSIPHHILGIIDDPDYDFTMDDFCKHVLEALDLITQNGHLPIIVGGSNSYLKKLLEDPTIAFHSKYDCSFIWLDVSLPILFPYLDKRVDEMVAVGMVDEIRDFFVPGADNTKGIRRAIGVPELDSYFEMEMKKGVDDAQKEKILQESIRKTKQNTFILAENQLSKIQNMAAKFGSMINKIDSTEVFEAILRGEDYQHLHQEIVIKPSMKIVKRFLEGTSHGFRKAKHSNGNGKHTPNGV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0467 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Mtr3g0467 303 Gene3D - 11 279 IPR027417 -
Mtr3g0467 303 Pfam IPP transferase 47 121 - -
Mtr3g0467 303 Pfam IPP transferase 128 228 - -
Mtr3g0467 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 164 IPR027417 -
Mtr3g0467 303 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 296 - -
Mtr3g0467 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 296 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0467 Mtr-Chr3 6032351 6033262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0467 95 287 C2H2 Transcription Factor Family AT2G27760 28.440 2.00e-18 83.6